CuGenDBv2

Gene ID	Lsi02G021680
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein
Genome location	chr02:28138666..28140352
RNA-Seq Expression	Lsi02G021680
Synteny	Lsi02G021680
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004150335.2 uncharacterized protein LOC101219200 [Cucumis sativus]

5.3e-66

88.57

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Query:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHY-PKP
        MEDYYYRRNYIPSFGNWEWNDHLPFSHCFE+SRIAGFPHDTDLYVAGDLY+NDVVTPAMIVVPRPRRKRDRQGKQ KKE W     SP NGM H+Y  KP
Subjt:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHY-PKP

Query:  IPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
        +PKPVDEDLYKISPDLLAAK+KKKRGLSYITNCFVPTCLI
Subjt:  IPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

XP_022953419.1 uncharacterized protein LOC111455979 [Cucurbita moschata]

1.4e-55

77.3

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Query:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENW--MKETESPPNGMMHHYPK
        MEDYY RRNYIPSFGNWEWNDHL FSHCFE+SRIAG+PHDTDLYV GDLY+NDVVTPAMIVVPR RRKR++QGKQGKK N+  MKETESPP+ ++  +P+
Subjt:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENW--MKETESPPNGMMHHYPK

Query:  PIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
        P PKPVDEDLYKI P+LL AK++KKRGLS+  N FVP CLI
Subjt:  PIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

XP_022991206.1 uncharacterized protein LOC111487931 [Cucurbita maxima]

8.4e-56

75.35

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Query:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENW---MKETESPPNGMMHHYP
        MEDYY RRNYIPSFGNWEWNDHL FSHCFE+SRIAG+PHDTDLYV GDLY+ND++TPAMIVVPR RRKR++QGK+GKK NW   MKETESPP+ ++  +P
Subjt:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENW---MKETESPPNGMMHHYP

Query:  KPIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
        +P PKPVDEDLYKI P+LL AK++KKRGLS+  N FVP CLI
Subjt:  KPIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

XP_023548222.1 uncharacterized protein LOC111806925 [Cucurbita pepo subsp. pepo]

1.7e-56

77.46

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Query:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENW---MKETESPPNGMMHHYP
        MEDYY RRNYIPSFGNWEWNDHL FSHCFE+SRIAG+PHDTDLYV GDLY+NDVVTPAMIVVPR RRKR++QGKQGKK NW   MKETESPP+ ++  +P
Subjt:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENW---MKETESPPNGMMHHYP

Query:  KPIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
        +P PKPVDEDLYKI P+LL AK++KKRGLS+  N FVP CLI
Subjt:  KPIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

XP_038899118.1 uncharacterized protein LOC120086508 [Benincasa hispida]

1.5e-73

94.29

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Query:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHY-PKP
        MEDYYYRRNYIPSFGNWEWNDHLPFSHCF++SRIAG+PHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQG+KENWMKETESPPNGMM+HY  KP
Subjt:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHY-PKP

Query:  IPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
        +PKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
Subjt:  IPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA54 Uncharacterized protein

2.5e-66

88.57

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Query:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHY-PKP
        MEDYYYRRNYIPSFGNWEWNDHLPFSHCFE+SRIAGFPHDTDLYVAGDLY+NDVVTPAMIVVPRPRRKRDRQGKQ KKE W     SP NGM H+Y  KP
Subjt:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHY-PKP

Query:  IPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
        +PKPVDEDLYKISPDLLAAK+KKKRGLSYITNCFVPTCLI
Subjt:  IPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

A0A6J1GPL2 uncharacterized protein LOC111455979

6.9e-56

77.3

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Query:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENW--MKETESPPNGMMHHYPK
        MEDYY RRNYIPSFGNWEWNDHL FSHCFE+SRIAG+PHDTDLYV GDLY+NDVVTPAMIVVPR RRKR++QGKQGKK N+  MKETESPP+ ++  +P+
Subjt:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENW--MKETESPPNGMMHHYPK

Query:  PIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
        P PKPVDEDLYKI P+LL AK++KKRGLS+  N FVP CLI
Subjt:  PIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

A0A6J1H7P4 uncharacterized protein LOC111460910

3.8e-54

77.7

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Query:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHYPKPI
        MEDY Y+RN+IP+FGNWEWNDHLPF+ CFEASRIAG+P   DLYVAGDLYQNDVVTPAMIVVPRPRRKRDR GKQ K++ W   TESPP   +H  PKP+
Subjt:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHYPKPI

Query:  PKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
        PKPVDEDLYKISP+   AK KKKRGLSYIT+CFVPTCLI
Subjt:  PKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

A0A6J1JQ37 uncharacterized protein LOC111487931

4.1e-56

75.35

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Query:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENW---MKETESPPNGMMHHYP
        MEDYY RRNYIPSFGNWEWNDHL FSHCFE+SRIAG+PHDTDLYV GDLY+ND++TPAMIVVPR RRKR++QGK+GKK NW   MKETESPP+ ++  +P
Subjt:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENW---MKETESPPNGMMHHYP

Query:  KPIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
        +P PKPVDEDLYKI P+LL AK++KKRGLS+  N FVP CLI
Subjt:  KPIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

A0A6J1KPV8 uncharacterized protein LOC111497631

3.8e-54

77.7

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Query:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHYPKPI
        MEDY Y+RN+IP+FGNWEWNDHLPF+ CFEASRIAG+P   DLYVAGDLYQNDVVTPAMIVVPRPRRKRDR GKQ K++ W   TESPP   +H  PKP+
Subjt:  MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHYPKPI

Query:  PKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI
        PKPVDEDLYKISP+   AK KKKRGLSYIT+CFVPTCLI
Subjt:  PKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G18310.2 unknown protein

2.1e-04

26.54

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Query:  EDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGF---PHDTDLYVAGDLYQNDVVTPAMIVV-------PRPRR---------KRDRQGKQGKKENWM
        + Y  +   IP FG WE  + +P +  FE  R AG     + T    +     +   + +           PRPR           ++++G Q +  +  
Subjt:  EDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGF---PHDTDLYVAGDLYQNDVVTPAMIVV-------PRPRR---------KRDRQGKQGKKENWM

Query:  KETES---PPNGMMHHYP------KPIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVP
         +++      NG+           KP PKPVDEDLYKI P+ + + T+K+R  S++  C VP
Subjt:  KETES---PPNGMMHHYP------KPIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVP

AT5G48500.1 unknown protein

3.0e-27

44.23

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Query:  YYRRNYIPSFGNWEWNDHLPFSHCFEAS--------RIAGFPHDTDLYVAGDLYQN-DVVTPAMIVVPRPRRKRDRQGKQGKKENWMKE-----TESPPN
        Y RR ++P+FG+W+WND +PF+ CFE +          A +P D DLY+AGDLY N  +V PA+I+VPR RR +  Q    KK N  K+     TE+   
Subjt:  YYRRNYIPSFGNWEWNDHLPFSHCFEAS--------RIAGFPHDTDLYVAGDLYQN-DVVTPAMIVVPRPRRKRDRQGKQGKKENWMKE-----TESPPN

Query:  GMMHHYPKPI-------PKPVDEDLYKISPDLLAAKTKKKR---GLSYITNCFVPT
              P P+       PKPVDEDLYK+SP LL+ K+K+KR   G   I+ CF+PT
Subjt:  GMMHHYPKPI-------PKPVDEDLYKISPDLLAAKTKKKR---GLSYITNCFVPT

Sequences

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CDS sequence

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ATGGAGGATTACTACTACCGGAGAAACTACATTCCCAGCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCTCACACTGCTTCGAAGCTTCTAGAATCGCCGGTTT
CCCTCACGACACCGATCTCTACGTCGCCGGTGATTTGTACCAAAACGACGTCGTTACTCCTGCCATGATCGTCGTTCCTCGCCCCAGGAGGAAGCGTGACAGGCAGGGGA
AGCAAGGAAAGAAGGAAAATTGGATGAAGGAAACTGAAAGCCCTCCTAATGGAATGATGCATCATTATCCAAAGCCAATTCCTAAGCCAGTTGATGAAGATTTGTATAAA
ATCTCCCCTGATCTCCTTGCTGCCAAGACCAAAAAGAAGAGAGGGCTGAGTTACATAACAAATTGCTTTGTGCCAACTTGTTTGATTTGA

mRNA sequence

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AAAAGGTAAAGGGATGCCTAATTTTTTTAAAAAAGCAACCCATTTCTGTCTGTCTCTCTCTTCCCTTACTCCTCTGTCCATGTCTGTCCCCCTCTCTTCCAATAACCCAA
AATCCCCAATTCTTCTTTCTCTCTACCATTTTCATTTCATAATATAAATAACCCTAAAACCCACCCCTCATTTCTTTCAAATCTCAACCCCAACACTCCCAATTCCTTCT
CATTTTCTCTCTTCAATTTACTAACCAAAATACCTTCTCCAATGGAGGATTACTACTACCGGAGAAACTACATTCCCAGCTTCGGAAACTGGGAATGGAACGACCATCTC
CCTTTCTCACACTGCTTCGAAGCTTCTAGAATCGCCGGTTTCCCTCACGACACCGATCTCTACGTCGCCGGTGATTTGTACCAAAACGACGTCGTTACTCCTGCCATGAT
CGTCGTTCCTCGCCCCAGGAGGAAGCGTGACAGGCAGGGGAAGCAAGGAAAGAAGGAAAATTGGATGAAGGAAACTGAAAGCCCTCCTAATGGAATGATGCATCATTATC
CAAAGCCAATTCCTAAGCCAGTTGATGAAGATTTGTATAAAATCTCCCCTGATCTCCTTGCTGCCAAGACCAAAAAGAAGAGAGGGCTGAGTTACATAACAAATTGCTTT
GTGCCAACTTGTTTGATTTGAAGAAGAAGGAAGAGATGATGAAGCTCAAAATTATGTGACAATGAATGTATATTTTTCTCATCAAAAAACAAACAGAGAGGCCAAATAGT
ACATATCTTTTGGAATGTTTGGTTATTAAATTCATATCATCATATTTATATATATATTATATCC

Protein sequence

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MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHYPKPIPKPVDEDLYK
ISPDLLAAKTKKKRGLSYITNCFVPTCLI

Lsi02G021680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome