; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G021690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G021690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAUGMIN subunit 3
Genome locationchr02:28151932..28155974
RNA-Seq ExpressionLsi02G021690
SyntenyLsi02G021690
Gene Ontology termsGO:0051225 - spindle assembly (biological process)
GO:0051301 - cell division (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0070652 - HAUS complex (cellular component)
GO:0072686 - mitotic spindle (cellular component)
InterPro domainsIPR026206 - HAUS augmin-like complex subunit 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576034.1 AUGMIN subunit 3, partial [Cucurbita argyrosperma subsp. sororia]2.0e-7197.97Show/hide
Query:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
        +IQAG STYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
Subjt:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH

Query:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLR+QVRELTARVRALQAS
Subjt:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
XP_022156083.1 AUGMIN subunit 3 isoform X1 [Momordica charantia]2.0e-7197.97Show/hide
Query:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
        +IQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
Subjt:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH

Query:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        CKKNEIVKHHSQEVGLQRRVF DFFCNPERLRSQVRELTARVRA+QAS
Subjt:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
XP_022991202.1 AUGMIN subunit 3 [Cucurbita maxima]2.0e-7197.97Show/hide
Query:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
        +IQAG STYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
Subjt:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH

Query:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLR+QVRELTARVRALQAS
Subjt:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
XP_023548224.1 AUGMIN subunit 3 [Cucurbita pepo subsp. pepo]2.0e-7197.97Show/hide
Query:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
        +IQAG STYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
Subjt:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH

Query:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLR+QVRELTARVRALQAS
Subjt:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
XP_038899056.1 AUGMIN subunit 3 [Benincasa hispida]1.2e-7197.97Show/hide
Query:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
        +IQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
Subjt:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH

Query:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLR+QVRELTARVRA+QAS
Subjt:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
TrEMBL top hitse value%identityAlignment
A0A1S3BGX4 AUGMIN subunit 3 isoform X12.8e-7197.3Show/hide
Query:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
        +IQAGVSTYVSAPGIIQQIS LHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPR LMKELDEMEKINAKLSSAVEEVTLEH
Subjt:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH

Query:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRA+QAS
Subjt:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
A0A5D3D231 AUGMIN subunit 3 isoform X22.8e-7197.3Show/hide
Query:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
        +IQAGVSTYVSAPGIIQQIS LHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPR LMKELDEMEKINAKLSSAVEEVTLEH
Subjt:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH

Query:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRA+QAS
Subjt:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
A0A6J1DPM8 AUGMIN subunit 3 isoform X19.7e-7297.97Show/hide
Query:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
        +IQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
Subjt:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH

Query:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        CKKNEIVKHHSQEVGLQRRVF DFFCNPERLRSQVRELTARVRA+QAS
Subjt:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
A0A6J1DS91 AUGMIN subunit 3 isoform X29.7e-7297.97Show/hide
Query:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
        +IQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
Subjt:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH

Query:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        CKKNEIVKHHSQEVGLQRRVF DFFCNPERLRSQVRELTARVRA+QAS
Subjt:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
A0A6J1JL46 AUGMIN subunit 39.7e-7297.97Show/hide
Query:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
        +IQAG STYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH
Subjt:  DIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEH

Query:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLR+QVRELTARVRALQAS
Subjt:  CKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
SwissProt top hitse value%identityAlignment
Q0WQE7 AUGMIN subunit 31.7e-5780.82Show/hide
Query:  QAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEHCK
        QAG+STYVSAP IIQQI +L SDL +LQSDLENSLP DRNRCIN+LC+ IQ+LQQLLFASSTTAQPILTP  LMKELDEM KIN+KLS+AVEEVTLEH  
Subjt:  QAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEHCK

Query:  KNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        K EIVKHH+++V LQRRVFVDFFCNPERLR+QVREL A VRA QAS
Subjt:  KNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
Arabidopsis top hitse value%identityAlignment
AT5G48520.1 unknown protein1.2e-5880.82Show/hide
Query:  QAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEHCK
        QAG+STYVSAP IIQQI +L SDL +LQSDLENSLP DRNRCIN+LC+ IQ+LQQLLFASSTTAQPILTP  LMKELDEM KIN+KLS+AVEEVTLEH  
Subjt:  QAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEHCK

Query:  KNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS
        K EIVKHH+++V LQRRVFVDFFCNPERLR+QVREL A VRA QAS
Subjt:  KNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCCAGGCTGGAGTATCAACTTATGTGTCTGCTCCCGGCATTATTCAACAGATATCTAGTCTTCATTCAGACTTGAGAACCCTTCAATCTGATCTTGAAAACTC
CCTCCCAGGCGACAGAAACAGATGCATCAATGATCTGTGCTCTCTTATTCAAAGTTTGCAGCAATTACTCTTTGCCTCTTCTACAACTGCACAACCAATACTGACGCCAC
GGGCCTTAATGAAAGAGCTGGATGAGATGGAAAAGATAAATGCCAAACTATCTTCTGCAGTTGAAGAAGTTACCCTGGAGCACTGTAAAAAGAATGAGATTGTCAAACAT
CATTCTCAGGAAGTAGGGCTACAACGTCGAGTTTTCGTTGACTTCTTTTGCAATCCTGAACGTCTCAGGAGTCAAGTTCGGGAACTGACTGCTCGAGTTAGAGCATTGCA
AGCCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATCCAGGCTGGAGTATCAACTTATGTGTCTGCTCCCGGCATTATTCAACAGATATCTAGTCTTCATTCAGACTTGAGAACCCTTCAATCTGATCTTGAAAACTC
CCTCCCAGGCGACAGAAACAGATGCATCAATGATCTGTGCTCTCTTATTCAAAGTTTGCAGCAATTACTCTTTGCCTCTTCTACAACTGCACAACCAATACTGACGCCAC
GGGCCTTAATGAAAGAGCTGGATGAGATGGAAAAGATAAATGCCAAACTATCTTCTGCAGTTGAAGAAGTTACCCTGGAGCACTGTAAAAAGAATGAGATTGTCAAACAT
CATTCTCAGGAAGTAGGGCTACAACGTCGAGTTTTCGTTGACTTCTTTTGCAATCCTGAACGTCTCAGGAGTCAAGTTCGGGAACTGACTGCTCGAGTTAGAGCATTGCA
AGCCTCATAGTTGACGTCTTTTGTATGTATATATATATATTGTTTCTTTCCCATTGCTTTGTTTGTATGTAACTGTTTACAATACATCACATGGCCATATGGGGATGCTT
AATTGTAAAAGGAAGGTTATAGGTTTTTAATGACACAGATGATCTGTTTTGGTAGTGTTAAATCATAGTTCCACTTAAGAGTGTTTGATATTTTACC
Protein sequenceShow/hide protein sequence
MDIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEHCKKNEIVKH
HSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS