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Lsi02G022080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G022080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtodermal factor 1 like
Genome locationchr02:28512782..28513892
RNA-Seq ExpressionLsi02G022080
SyntenyLsi02G022080
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148954.1 uncharacterized protein LOC101220310 [Cucumis sativus]1.3e-6286.45Show/hide
Query:  MDSSRLLNILLLLCFAAA-AEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGR
        MDSSR LN+LLLLCFAAA AE AS RRPGFLFSRT GRCTAQFWSSR EAWPRMAPESATVAKIFGSRAHE YGSEMTLMEAAA       DEE+E FGR
Subjt:  MDSSRLLNILLLLCFAAA-AEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGR

Query:  VVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        VVKEAT ALLNSY RRR FPYSAWEVKTLFIKALVSKEAA LQSQRFAFANESCN
Subjt:  VVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

XP_022953859.1 uncharacterized protein LOC111456270 [Cucurbita moschata]3.4e-5882.69Show/hide
Query:  MDSSRLLNILLLLCF--AAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFG
        M++ RLL+ LLLL F  AAA EAA +RRPGFLFSRTRGRCT +FWSSRREAWPRMAPESATVAKIFGSRAHE YGSEMTL+ AAA VA+A+ +EE+EAFG
Subjt:  MDSSRLLNILLLLCF--AAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFG

Query:  RVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        RVVKEAT ALLNSYA RR+FPY+AWEVKTL IKALVSKEAAALQSQRFAFANESCN
Subjt:  RVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

XP_022991546.1 uncharacterized protein LOC111488125 [Cucurbita maxima]1.2e-5885.53Show/hide
Query:  SRLLNILLLLCFAAAA-EAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRVVK
        +RLL+ LLLL FAAAA EAA +RRPGFLFSRTRGRCT +FWSSRREAWPRMAPESATVAKIFGSRAHE YGSEMTL+ AAA VAVA+ +EE+EAFGRVVK
Subjt:  SRLLNILLLLCFAAAA-EAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRVVK

Query:  EATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        EAT ALLNSYA RR+FPY+AWEVKTL IKALVSKEAAALQSQRFAFANESCN
Subjt:  EATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

XP_023548905.1 uncharacterized protein LOC111807417 [Cucurbita pepo subsp. pepo]1.7e-5782.69Show/hide
Query:  MDSSRLLNILLLLCF--AAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFG
        M++ RLL+ LLLL F  AAA EAA +R PGFLFSRTRGRCT +FWSSRREAWPRMAPESATVAKIFGSRAHE YGSEMTL+ AAA VAVA+ +EE+EAFG
Subjt:  MDSSRLLNILLLLCF--AAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFG

Query:  RVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        RVVKEAT ALLNSYA RR+FPYSAWEVKTL IKALVSKEAAALQS RFAFANESCN
Subjt:  RVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

XP_038899192.1 uncharacterized protein LOC120086555 [Benincasa hispida]1.1e-6488.68Show/hide
Query:  MDSSRLLN-ILLLLCF----AAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDE
        MDSSRL N +LLLLCF    A AAEA STRRPGFLFSRTRGRCTAQFWSS REAWPRMAPESATVAKIFGSRAHE YGSEMTLMEAAAA  VA  DEE+E
Subjt:  MDSSRLLN-ILLLLCF----AAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDE

Query:  AFGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        AFGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAA LQS+RFAFANESCN
Subjt:  AFGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

TrEMBL top hitse value%identityAlignment
A0A0A0K735 Uncharacterized protein6.5e-6386.45Show/hide
Query:  MDSSRLLNILLLLCFAAA-AEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGR
        MDSSR LN+LLLLCFAAA AE AS RRPGFLFSRT GRCTAQFWSSR EAWPRMAPESATVAKIFGSRAHE YGSEMTLMEAAA       DEE+E FGR
Subjt:  MDSSRLLNILLLLCFAAA-AEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGR

Query:  VVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        VVKEAT ALLNSY RRR FPYSAWEVKTLFIKALVSKEAA LQSQRFAFANESCN
Subjt:  VVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

A0A1S3BQF6 uncharacterized protein LOC1034925951.8e-5781.7Show/hide
Query:  MDSSRLLNILLLLCFAAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRV
        MDSS  L +LLLL FAAAAE AS R PGFLFSRT GRCTAQFWSSR EAWPRMAPESATVAKIFGSRA E YGSEMTLMEAA          E+E FGRV
Subjt:  MDSSRLLNILLLLCFAAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRV

Query:  VKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC
        VKEAT ALLNSYARRR+FPYSAWEVKTL IKALVSKEAA LQSQRFAFANESC
Subjt:  VKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC

A0A5A7UZL8 Uncharacterized protein1.8e-5781.7Show/hide
Query:  MDSSRLLNILLLLCFAAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRV
        MDSS  L +LLLL FAAAAE AS R PGFLFSRT GRCTAQFWSSR EAWPRMAPESATVAKIFGSRA E YGSEMTLMEAA          E+E FGRV
Subjt:  MDSSRLLNILLLLCFAAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRV

Query:  VKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC
        VKEAT ALLNSYARRR+FPYSAWEVKTL IKALVSKEAA LQSQRFAFANESC
Subjt:  VKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC

A0A6J1GR22 uncharacterized protein LOC1114562701.7e-5882.69Show/hide
Query:  MDSSRLLNILLLLCF--AAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFG
        M++ RLL+ LLLL F  AAA EAA +RRPGFLFSRTRGRCT +FWSSRREAWPRMAPESATVAKIFGSRAHE YGSEMTL+ AAA VA+A+ +EE+EAFG
Subjt:  MDSSRLLNILLLLCF--AAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFG

Query:  RVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        RVVKEAT ALLNSYA RR+FPY+AWEVKTL IKALVSKEAAALQSQRFAFANESCN
Subjt:  RVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

A0A6J1JR18 uncharacterized protein LOC1114881255.7e-5985.53Show/hide
Query:  SRLLNILLLLCFAAAA-EAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRVVK
        +RLL+ LLLL FAAAA EAA +RRPGFLFSRTRGRCT +FWSSRREAWPRMAPESATVAKIFGSRAHE YGSEMTL+ AAA VAVA+ +EE+EAFGRVVK
Subjt:  SRLLNILLLLCFAAAA-EAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRVVK

Query:  EATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        EAT ALLNSYA RR+FPY+AWEVKTL IKALVSKEAAALQSQRFAFANESCN
Subjt:  EATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein1.2e-0535.04Show/hide
Query:  CTAQFW--SSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALV-
        C+ Q W     R  W  + P++  VA  FG  A  +YG++MT+ EA        +D   EA+  +++EAT ALLNSY     FPY++  V T    AL+ 
Subjt:  CTAQFW--SSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALV-

Query:  -SKEAAALQSQRFAFAN
         S+    + + RF  AN
Subjt:  -SKEAAALQSQRFAFAN

AT2G20515.1 unknown protein3.4e-3249.67Show/hide
Query:  SSRLLNILLLLCFAAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSR-AHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRVV
        S  +L    LLCF A   +A+  RPGF+++R RGRCT Q+WSS+REAWPRM PE +TV KIFG   A E + S++TL+E     + A  DEE  A+G ++
Subjt:  SSRLLNILLLLCFAAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSR-AHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRVV

Query:  KEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        K+   AL+NSYA R+ F Y+ WEVKT+ I+A+VS+ AA  Q++ FA AN +C+
Subjt:  KEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCTTCTCGCTTACTCAATATTCTTCTCCTTCTCTGTTTCGCCGCCGCCGCCGAAGCAGCATCAACGCGCCGCCCTGGATTTCTCTTCTCAAGAACCAGAGGAAG
ATGCACTGCACAGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCGCGGATGGCGCCGGAATCGGCGACGGTAGCGAAGATTTTCGGATCGAGAGCTCATGAACTGTACGGAT
CTGAGATGACGCTAATGGAAGCGGCGGCGGCGGTGGCGGTGGCGGAGGTGGATGAGGAAGATGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACTGTAGCATTGTTGAAT
TCATATGCTAGAAGAAGGGAGTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGCTCTTCAGTCTCAACGTTTTGC
TTTTGCCAATGAGTCTTGTAATTAG
mRNA sequenceShow/hide mRNA sequence
GTATTAAAAAAAAACATTAAAGTTTATTAAAAACTTAAAAGGGTCCATCCCCATCCTGTCCTTTTCGAATACCCAAAAGCGGGATACGAAGCTTTTGAAACTTTCTTGAA
GAAATTCAGACGAATTCTTCCCCCAAATCGGAGAAAGTGGGACTATGGACTCTTCTCGCTTACTCAATATTCTTCTCCTTCTCTGTTTCGCCGCCGCCGCCGAAGCAGCA
TCAACGCGCCGCCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACTGCACAGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCGCGGATGGCGCCGGAATCGGCGAC
GGTAGCGAAGATTTTCGGATCGAGAGCTCATGAACTGTACGGATCTGAGATGACGCTAATGGAAGCGGCGGCGGCGGTGGCGGTGGCGGAGGTGGATGAGGAAGATGAGG
CGTTCGGTAGAGTAGTGAAGGAGGCAACTGTAGCATTGTTGAATTCATATGCTAGAAGAAGGGAGTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCA
TTGGTTTCTAAAGAGGCTGCTGCTCTTCAGTCTCAACGTTTTGCTTTTGCCAATGAGTCTTGTAATTAGCAACGAGTCTCACGAGACAACCGTCAACCGTTCTCTCCTTT
ATTTAAATTTAGGAGTGTTTGTGGTAGTTAAATGTTGGAGGATTAGACGGATTGTCTCGTTTTACAAGTTGATAATCTTTGTCAATGAATGTTTGACTCGGGTTTCAACA
AGTTTATAATTGTTGTTTTGTGTTTGGGATTGAAAGAGAATTACGTGTCAAGTTAACAAAAGAAAACTAAAAGGGAAAGGTATAAAAGTTCATACACAACGAATAATACA
TAAAAAGTAAAA
Protein sequenceShow/hide protein sequence
MDSSRLLNILLLLCFAAAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHELYGSEMTLMEAAAAVAVAEVDEEDEAFGRVVKEATVALLN
SYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN