; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G022170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G022170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEthylene-responsive transcription factor
Genome locationchr02:28610212..28610610
RNA-Seq ExpressionLsi02G022170
SyntenyLsi02G022170
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TMW85204.1 hypothetical protein EJD97_023517 [Solanum chilense]2.5e-3362.5Show/hide
Query:  MEDRRQRTPEINGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSF----ESQSSS
        ME         NGGGG+  +KYRGVRRRPWGKFAAEIRDS R+G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEY L + SS      S SSS
Subjt:  MEDRRQRTPEINGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSF----ESQSSS

Query:  LRNDETERKEQKAVFEFECLDEKLLDELLDFDEETN
             +     + V EFE LD+KLL+ELLD DEETN
Subjt:  LRNDETERKEQKAVFEFECLDEKLLDELLDFDEETN

XP_015087543.1 ethylene-responsive transcription factor ERF096 [Solanum pennellii]2.3e-3462.12Show/hide
Query:  MEDRRQRTPEINGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRND
        ME         NGGGG+  +KYRGVRRRPWGKFAAEIRDS R+G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEY L + SS    + S+ + 
Subjt:  MEDRRQRTPEINGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRND

Query:  ETERKEQKAVFEFECLDEKLLDELLDFDEETN
         +     + V EFE LD+KLL+ELLD DEETN
Subjt:  ETERKEQKAVFEFECLDEKLLDELLDFDEETN

XP_030498307.1 ethylene-responsive transcription factor ERF098-like [Cannabis sativa]6.6e-3466.14Show/hide
Query:  DRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLRNDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SS  S SS++RN ET+++
Subjt:  DRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLRNDETERK

Query:  EQKAVFEFECLDEKLLDELLDFDEETN
        E   VFEFE LD+KLLDELLDFD + N
Subjt:  EQKAVFEFECLDEKLLDELLDFDEETN

XP_038896382.1 ethylene-responsive transcription factor 14-like [Benincasa hispida]1.3e-5384.17Show/hide
Query:  MEDRRQRTPEIN-------GGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQ
        MED RQR PEIN       GGGG+R VKYRGVRRRPWGKFAAEIRDSTRRG RIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM VSSFESQ
Subjt:  MEDRRQRTPEIN-------GGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQ

Query:  SSSLRNDETERKEQKAVFEFECLDEKLLDELLDFDEETN
        SSSL+NDETERKE+  V EFECLDE LLDELLDF +E N
Subjt:  SSSLRNDETERKEQKAVFEFECLDEKLLDELLDFDEETN

XP_042496191.1 ethylene-responsive transcription factor ERF098-like [Macadamia integrifolia]1.5e-3371.19Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL----MNVSSFESQSSSLR-NDETERKEQKAVFEFE
        VKYRGVRRRPWGKFAAEIRDSTR GVR+WLGTF TAEEAARAYD+AAFRMRG LA LNFP+EYP      +  S  S SSSLR N E +R   K V E E
Subjt:  VKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL----MNVSSFESQSSSLR-NDETERKEQKAVFEFE

Query:  CLDEKLLDELLDFDEETN
        CLD+KLLDELL  DE+ N
Subjt:  CLDEKLLDELLDFDEETN

TrEMBL top hitse value%identityAlignment
A0A2P5ECS8 AP2/ERF domain containing protein2.7e-3361.94Show/hide
Query:  NGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN--------VSSFESQSSSLR-----
        N GGG   VKYRGVRRRPWGKFAAEIRDSTR G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEYPL N         ++F S +SS+R     
Subjt:  NGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN--------VSSFESQSSSLR-----

Query:  NDETERKEQKAVFEFECLDEKLLDELLDFDEETN
        +  +  ++ K V EFE LD+KLL+ELLD+D++ N
Subjt:  NDETERKEQKAVFEFECLDEKLLDELLDFDEETN

A0A3Q7J2W9 AP2/ERF domain-containing protein4.6e-3361.76Show/hide
Query:  MEDRRQRTPEINGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSF----ESQSSS
        ME         NGGGG+  +KYRGVRRRPWGKFAAEIRDS R+G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEY L + SS      S SSS
Subjt:  MEDRRQRTPEINGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSF----ESQSSS

Query:  LRNDETERKEQKAVFEFECLDEKLLDELLDFDEETN
             +     + V EFE LD+KLL+ELLD DEE N
Subjt:  LRNDETERKEQKAVFEFECLDEKLLDELLDFDEETN

A0A6N2AUH4 AP2/ERF domain-containing protein1.2e-3362.5Show/hide
Query:  MEDRRQRTPEINGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSF----ESQSSS
        ME         NGGGG+  +KYRGVRRRPWGKFAAEIRDS R+G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEY L + SS      S SSS
Subjt:  MEDRRQRTPEINGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSF----ESQSSS

Query:  LRNDETERKEQKAVFEFECLDEKLLDELLDFDEETN
             +     + V EFE LD+KLL+ELLD DEETN
Subjt:  LRNDETERKEQKAVFEFECLDEKLLDELLDFDEETN

A0A7J6GXW5 AP2/ERF domain-containing protein3.2e-3466.14Show/hide
Query:  DRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLRNDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SS  S SS++RN ET+++
Subjt:  DRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLRNDETERK

Query:  EQKAVFEFECLDEKLLDELLDFDEETN
        E   VFEFE LD+KLLDELLDFD + N
Subjt:  EQKAVFEFECLDEKLLDELLDFDEETN

A0A803PGP0 Uncharacterized protein3.2e-3466.14Show/hide
Query:  DRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLRNDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SS  S SS++RN ET+++
Subjt:  DRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLRNDETERK

Query:  EQKAVFEFECLDEKLLDELLDFDEETN
        E   VFEFE LD+KLLDELLDFD + N
Subjt:  EQKAVFEFECLDEKLLDELLDFDEETN

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI51.6e-2258.65Show/hide
Query:  KYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS----SFESQSSSLRNDETERKEQKA-----VF
        KYRGVRRRPWGK+AAEIRDS R G R+WLGTFETAEEAA AYDRAAFRMRG  A LNFP E    +VS    S  S S +  N+      + +     VF
Subjt:  KYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS----SFESQSSSLRNDETERKEQKA-----VF

Query:  EFEC
        E  C
Subjt:  EFEC

P93822 Ethylene-responsive transcription factor 143.5e-3057.85Show/hide
Query:  NGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRNDETERKEQKAVF
        +GGGG    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY +   SS  + +SS           + VF
Subjt:  NGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRNDETERKEQKAVF

Query:  EFECLDEKLLDELLDFDEETN
        EFE LD+ +LDELL++ E  N
Subjt:  EFECLDEKLLDELLDFDEETN

Q9LSX0 Ethylene-responsive transcription factor ERF0961.1e-2856.67Show/hide
Query:  GGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-MNVSSFESQSSSLRNDETERKEQKAVFE
        G G    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY +   VSS  + + S     +     + VFE
Subjt:  GGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-MNVSSFESQSSSLRNDETERKEQKAVFE

Query:  FECLDEKLLDELLDFDEETN
        FE LD+ +L+ELL+  E+ N
Subjt:  FECLDEKLLDELLDFDEETN

Q9LTC5 Ethylene-responsive transcription factor ERF0981.4e-3159.06Show/hide
Query:  NGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEE-YPLMN--------VSSFESQSSSLRNDET
        N    D+  ++RGVRRRPWGKFAAEIRD +R G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP E YP M+         SS  S SS   +   
Subjt:  NGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEE-YPLMN--------VSSFESQSSSLRNDET

Query:  ERKEQKAVFEFECLDEKLLDELLDFDE
         R+ Q+ VFEFE LD+K+L+ELLD +E
Subjt:  ERKEQKAVFEFECLDEKLLDELLDFDE

Q9LTC6 Ethylene-responsive transcription factor ERF0956.6e-2955.46Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRNDETERK------EQKAVFEF
        +KYRGVR+RPWGK+AAEIRDS R G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M      S  +++ +  +  +      + + V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRNDETERK------EQKAVFEF

Query:  ECLDEKLLDELLDFDEETN
        E LD+ LL+ELLD+ E +N
Subjt:  ECLDEKLLDELLDFDEETN

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 142.5e-3157.85Show/hide
Query:  NGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRNDETERKEQKAVF
        +GGGG    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY +   SS  + +SS           + VF
Subjt:  NGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRNDETERKEQKAVF

Query:  EFECLDEKLLDELLDFDEETN
        EFE LD+ +LDELL++ E  N
Subjt:  EFECLDEKLLDELLDFDEETN

AT2G31230.1 ethylene-responsive element binding factor 151.2e-2264.1Show/hide
Query:  GGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFES
        G D    YRGVR+RPWGKFAAEIRDSTR G+R+WLGTF+ AEEAA AYD+AAF  +G LATLNFP E    ++   E+
Subjt:  GGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFES

AT3G23220.1 Integrase-type DNA-binding superfamily protein4.7e-3055.46Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRNDETERK------EQKAVFEF
        +KYRGVR+RPWGK+AAEIRDS R G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M      S  +++ +  +  +      + + V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRNDETERK------EQKAVFEF

Query:  ECLDEKLLDELLDFDEETN
        E LD+ LL+ELLD+ E +N
Subjt:  ECLDEKLLDELLDFDEETN

AT3G23230.1 Integrase-type DNA-binding superfamily protein1.0e-3259.06Show/hide
Query:  NGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEE-YPLMN--------VSSFESQSSSLRNDET
        N    D+  ++RGVRRRPWGKFAAEIRD +R G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP E YP M+         SS  S SS   +   
Subjt:  NGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEE-YPLMN--------VSSFESQSSSLRNDET

Query:  ERKEQKAVFEFECLDEKLLDELLDFDE
         R+ Q+ VFEFE LD+K+L+ELLD +E
Subjt:  ERKEQKAVFEFECLDEKLLDELLDFDE

AT5G43410.1 Integrase-type DNA-binding superfamily protein8.0e-3056.67Show/hide
Query:  GGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-MNVSSFESQSSSLRNDETERKEQKAVFE
        G G    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY +   VSS  + + S     +     + VFE
Subjt:  GGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-MNVSSFESQSSSLRNDETERKEQKAVFE

Query:  FECLDEKLLDELLDFDEETN
        FE LD+ +L+ELL+  E+ N
Subjt:  FECLDEKLLDELLDFDEETN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATCGTCGCCAGAGAACACCGGAGATCAACGGAGGAGGAGGAGATAGGTTTGTGAAGTACAGAGGAGTACGGCGGCGGCCGTGGGGGAAGTTTGCGGCGGAGAT
TCGGGACTCGACACGGCGGGGGGTTCGGATTTGGCTGGGGACTTTTGAGACGGCTGAAGAAGCGGCGAGAGCGTACGATCGAGCGGCTTTCAGAATGAGAGGGCAATTGG
CAACTCTGAATTTTCCGGAGGAATATCCATTAATGAACGTTTCGAGCTTTGAATCTCAATCAAGTTCGTTGAGAAATGATGAAACAGAGAGAAAAGAACAAAAAGCAGTA
TTTGAATTTGAGTGTTTGGATGAGAAATTGTTGGATGAACTTCTCGACTTTGACGAGGAAACCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATCGTCGCCAGAGAACACCGGAGATCAACGGAGGAGGAGGAGATAGGTTTGTGAAGTACAGAGGAGTACGGCGGCGGCCGTGGGGGAAGTTTGCGGCGGAGAT
TCGGGACTCGACACGGCGGGGGGTTCGGATTTGGCTGGGGACTTTTGAGACGGCTGAAGAAGCGGCGAGAGCGTACGATCGAGCGGCTTTCAGAATGAGAGGGCAATTGG
CAACTCTGAATTTTCCGGAGGAATATCCATTAATGAACGTTTCGAGCTTTGAATCTCAATCAAGTTCGTTGAGAAATGATGAAACAGAGAGAAAAGAACAAAAAGCAGTA
TTTGAATTTGAGTGTTTGGATGAGAAATTGTTGGATGAACTTCTCGACTTTGACGAGGAAACCAACTGA
Protein sequenceShow/hide protein sequence
MEDRRQRTPEINGGGGDRFVKYRGVRRRPWGKFAAEIRDSTRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLRNDETERKEQKAV
FEFECLDEKLLDELLDFDEETN