; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G022430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G022430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin-responsive protein
Genome locationchr02:28910431..28912917
RNA-Seq ExpressionLsi02G022430
SyntenyLsi02G022430
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575943.1 Auxin-induced protein 22D, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5281.62Show/hide
Query:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV
        MAVS+D    + QATELRLGLPGS+EP+R +G   NKRPFSEI+KESNSSV DAGN LDQ+SQ PPSKAQVVGWPPVRSYRRNCLAGKK+E ES GGV+V
Subjt:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV

Query:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        KVSMDGAP+LRK+DLTIYKSYTELVKALENMFKFNL
Subjt:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

XP_004146959.1 auxin-induced protein 22D [Cucumis sativus]4.4e-5783.82Show/hide
Query:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV
        +A SSDH DLNFQATELRLGLPGSD+ NRRT S  NKRPFSEI+KE+NSSV D GN +DQTSQPPPSKAQVVGWPPVRSYR+NCLA KKSE ESS G +V
Subjt:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV

Query:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        KVSMDGAPYLRKIDLT+YKSYT+LVKALENMFKFNL
Subjt:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

XP_008451269.1 PREDICTED: auxin-induced protein 22D-like [Cucumis melo]2.0e-5786.03Show/hide
Query:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV
        +A SSDH DLNFQATELRLGLPGSDEP+RRT S  NKRPFSEI+KESNSS+ + GN LDQTSQPPPSKAQVVGWPPVRSYR+N LAGKKSE ESS G +V
Subjt:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV

Query:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
Subjt:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

XP_022991276.1 auxin-induced protein 22D-like [Cucurbita maxima]6.6e-5383.09Show/hide
Query:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV
        MAV S+H+DL  QATELRLGLPGS+EP+R +G   NKRPFSEI+KESNSSV DAGN LDQ+S+ PPSKAQVVGWPPVRSYRRNCLAGKK+E ES GGV+V
Subjt:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV

Query:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        KVSMDGAPYLRK+DLTIYKSYTELVKALENMFKFNL
Subjt:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

XP_038897046.1 auxin-induced protein 22D-like [Benincasa hispida]2.3e-6190.51Show/hide
Query:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSG-GVF
        +AVSSDHQDLNFQATELRLGLPGSDEP RRTGSH NKR FSEI+KESN SV DAGNRL+Q SQPPPSKAQVVGWPPVRSYR+NCLAGKKSE ESSG GV+
Subjt:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSG-GVF

Query:  VKVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        VKVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
Subjt:  VKVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

TrEMBL top hitse value%identityAlignment
A0A0A0K770 Auxin-responsive protein2.1e-5783.82Show/hide
Query:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV
        +A SSDH DLNFQATELRLGLPGSD+ NRRT S  NKRPFSEI+KE+NSSV D GN +DQTSQPPPSKAQVVGWPPVRSYR+NCLA KKSE ESS G +V
Subjt:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV

Query:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        KVSMDGAPYLRKIDLT+YKSYT+LVKALENMFKFNL
Subjt:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

A0A1S3BS59 Auxin-responsive protein9.5e-5886.03Show/hide
Query:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV
        +A SSDH DLNFQATELRLGLPGSDEP+RRT S  NKRPFSEI+KESNSS+ + GN LDQTSQPPPSKAQVVGWPPVRSYR+N LAGKKSE ESS G +V
Subjt:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV

Query:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
Subjt:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

A0A5A7UYH3 Auxin-responsive protein9.5e-5886.03Show/hide
Query:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV
        +A SSDH DLNFQATELRLGLPGSDEP+RRT S  NKRPFSEI+KESNSS+ + GN LDQTSQPPPSKAQVVGWPPVRSYR+N LAGKKSE ESS G +V
Subjt:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV

Query:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
Subjt:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

A0A6J1GPG2 Auxin-responsive protein7.1e-5381.62Show/hide
Query:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV
        MAVS+D    + QATELRLGLPGS+EP+R +G   NKRPFSEI+KESNSSV DAGN L+Q+SQ PPSKAQVVGWPPVRSYRRNCLAGKK+E ES GGV+V
Subjt:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV

Query:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        KVSMDGAPYLRK+DLTIYKSYTELVKALENMFKFNL
Subjt:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

A0A6J1JQA6 Auxin-responsive protein3.2e-5383.09Show/hide
Query:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV
        MAV S+H+DL  QATELRLGLPGS+EP+R +G   NKRPFSEI+KESNSSV DAGN LDQ+S+ PPSKAQVVGWPPVRSYRRNCLAGKK+E ES GGV+V
Subjt:  MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV

Query:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        KVSMDGAPYLRK+DLTIYKSYTELVKALENMFKFNL
Subjt:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

SwissProt top hitse value%identityAlignment
O24542 Auxin-induced protein 22D2.1e-3355.3Show/hide
Query:  AVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFVK
        ++ S  ++LN +ATELRLGLPGSDEP +R  +  NKR  S  E     S+ +  +   + +  PP+KAQVVGWPP+RSYR+N +  KK E     G++VK
Subjt:  AVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFVK

Query:  VSMDGAPYLRKIDLTIYKSYTELVKALENMFK
        VSM GAPYLRKIDL +YKSY EL+KALENMFK
Subjt:  VSMDGAPYLRKIDLTIYKSYTELVKALENMFK

O24543 Auxin-induced protein 22E7.6e-2850.35Show/hide
Query:  VSSDHQDLNFQATELRLGLPGSDEPNRR---TGSHL---NKRPFSEIEKES-----NSSVVDAGNRLDQTSQP-PPSKAQVVGWPPVRSYRRNCLAGKKS
        + S   +LN +ATELRLGLPGSDEP  +   +GS +   NKR   E+E+       NS   D+    D       P+K QVVGWPP+RS+R+N L  KK 
Subjt:  VSSDHQDLNFQATELRLGLPGSDEPNRR---TGSHL---NKRPFSEIEKES-----NSSVVDAGNRLDQTSQP-PPSKAQVVGWPPVRSYRRNCLAGKKS

Query:  EAESSGGVFVKVSMDGAPYLRKIDLTIYKSYTELVKALENMFK
        E     G+++KVSM GAPYLRKIDL +YKSY EL+KAL+N+FK
Subjt:  EAESSGGVFVKVSMDGAPYLRKIDLTIYKSYTELVKALENMFK

P33077 Auxin-responsive protein IAA41.3e-2757.03Show/hide
Query:  LNFQATELRLGLPGSDEPNRRTGSHLNKRPFSE-IEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFVKVSMDGAP
        +N +ATELRLGLPG++E      S  NKR   E  EKE  S+         +T    P KAQ+VGWPPVRSYR+N +  KKSE+E  G  +VKVSMDGAP
Subjt:  LNFQATELRLGLPGSDEPNRRTGSHLNKRPFSE-IEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFVKVSMDGAP

Query:  YLRKIDLTIYKSYTELVKALENMFKFNL
        YLRKIDLT+YK Y EL+K+LENMFKF++
Subjt:  YLRKIDLTIYKSYTELVKALENMFKFNL

P49679 Auxin-induced protein IAA44.2e-2650.74Show/hide
Query:  LNFQATELRLGLPGSDEPNRRTGSH-------LNKR--PFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV
        + F+ATELRLGLPG  E   +   H        NKR  P +  E  S S V +  + ++ +S  PP+KA++VGWPP+RSYR+N L     EA+  GG+FV
Subjt:  LNFQATELRLGLPGSDEPNRRTGSH-------LNKR--PFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFV

Query:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        KVSMDGAPYLRKIDL +Y  Y+EL+KALE MFK  +
Subjt:  KVSMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

Q38822 Auxin-responsive protein IAA33.1e-2955.22Show/hide
Query:  LNFQATELRLGLPGSD---EPNRRTG--SHLNKRPFS-EIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSG-GVFVKV
        +N + TELRLGLPG+D   E   R    ++ NKR  S + EKE     +++ +R  +TS  PP KAQ+VGWPPVRSYR+N +  KK+E+E  G G++VKV
Subjt:  LNFQATELRLGLPGSD---EPNRRTG--SHLNKRPFS-EIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSG-GVFVKV

Query:  SMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        SMDGAPYLRKIDL+ YK Y+EL+KALE MFKF++
Subjt:  SMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

Arabidopsis top hitse value%identityAlignment
AT1G04240.1 AUX/IAA transcriptional regulator family protein2.2e-3055.22Show/hide
Query:  LNFQATELRLGLPGSD---EPNRRTG--SHLNKRPFS-EIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSG-GVFVKV
        +N + TELRLGLPG+D   E   R    ++ NKR  S + EKE     +++ +R  +TS  PP KAQ+VGWPPVRSYR+N +  KK+E+E  G G++VKV
Subjt:  LNFQATELRLGLPGSD---EPNRRTG--SHLNKRPFS-EIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSG-GVFVKV

Query:  SMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL
        SMDGAPYLRKIDL+ YK Y+EL+KALE MFKF++
Subjt:  SMDGAPYLRKIDLTIYKSYTELVKALENMFKFNL

AT1G04250.1 AUX/IAA transcriptional regulator family protein4.0e-2448.95Show/hide
Query:  DLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSE------------IEKESNSS----VVDAGNRLDQTSQP--PPSKAQVVGWPPVRSYRRNCLAG-KK
        +LN + TEL LGLPG D     TG   NKR FSE              KE +++      D+  +      P  PP+KAQVVGWPPVRSYR+N +   +K
Subjt:  DLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSE------------IEKESNSS----VVDAGNRLDQTSQP--PPSKAQVVGWPPVRSYRRNCLAG-KK

Query:  SEAESSGGVFVKVSMDGAPYLRKIDLTIYKSYTELVKALENMF
        S        FVKVSMDGAPYLRKIDL +YKSY EL  AL NMF
Subjt:  SEAESSGGVFVKVSMDGAPYLRKIDLTIYKSYTELVKALENMF

AT3G04730.1 indoleacetic acid-induced protein 162.8e-2544.08Show/hide
Query:  LNFQATELRLGLPGSDEPNRRTGSHLNKRPFSE---IEKESNSSVVDAGNRLDQTSQ-----PPPSKAQVVGWPPVRSYRRNCLAGKK------------
        +NF+ATELRLGLPG +      G +  KR FSE   ++   +S+ +D+ +++D  +       PP+KAQVVGWPPVRS+R+N ++G+K            
Subjt:  LNFQATELRLGLPGSDEPNRRTGSHLNKRPFSE---IEKESNSSVVDAGNRLDQTSQ-----PPPSKAQVVGWPPVRSYRRNCLAGKK------------

Query:  ----SEAESSGG-----VFVKVSMDGAPYLRKIDLTIYKSYTELVKALENMF
            S A SS        +VKVSMDGAPYLRKIDL +YK+Y +L  AL  MF
Subjt:  ----SEAESSGG-----VFVKVSMDGAPYLRKIDLTIYKSYTELVKALENMF

AT4G14560.1 indole-3-acetic acid inducible2.0e-2348.82Show/hide
Query:  LNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFVKVSMDGAPY
        LN + TELRLGLPG+ E  +   S +     S  ++++N S         + S PPP+K Q+VGWPPVRS R+N          +    +VKVSMDGAPY
Subjt:  LNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFVKVSMDGAPY

Query:  LRKIDLTIYKSYTELVKALENMFKFNL
        LRKIDL +YK+Y EL+KALENMFKF +
Subjt:  LRKIDLTIYKSYTELVKALENMFKFNL

AT5G43700.1 AUX/IAA transcriptional regulator family protein9.2e-2957.03Show/hide
Query:  LNFQATELRLGLPGSDEPNRRTGSHLNKRPFSE-IEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFVKVSMDGAP
        +N +ATELRLGLPG++E      S  NKR   E  EKE  S+         +T    P KAQ+VGWPPVRSYR+N +  KKSE+E  G  +VKVSMDGAP
Subjt:  LNFQATELRLGLPGSDEPNRRTGSHLNKRPFSE-IEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFVKVSMDGAP

Query:  YLRKIDLTIYKSYTELVKALENMFKFNL
        YLRKIDLT+YK Y EL+K+LENMFKF++
Subjt:  YLRKIDLTIYKSYTELVKALENMFKFNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTCTTCTGACCACCAAGATCTCAACTTCCAAGCCACCGAGCTTCGCCTCGGCCTCCCCGGCTCCGACGAGCCCAATCGCCGCACCGGATCGCACTTGAACAA
GAGACCCTTTTCGGAGATTGAAAAAGAAAGTAACAGCAGCGTTGTGGATGCCGGAAATCGCCTTGATCAAACCTCCCAACCTCCTCCCTCCAAGGCACAAGTTGTTGGAT
GGCCGCCGGTTCGATCATACCGGAGGAATTGTTTGGCCGGAAAGAAGAGCGAGGCAGAAAGTTCCGGCGGAGTGTTCGTGAAAGTGAGCATGGACGGAGCTCCATACTTA
AGGAAGATTGATTTAACCATTTACAAAAGTTATACAGAGCTTGTAAAGGCCTTAGAAAACATGTTCAAATTCAATCTAGTTTGA
mRNA sequenceShow/hide mRNA sequence
AGAAATTTGGTTCTTCCCATTATATATATTCTCTTTTTATTACAAACTTTCACGCCAACCCCCAAAACACAAAAAAACCTTTCCACATTATCATCATTTCTCTCAAATTC
TTCAAACCTTCCATCAATTCTAACTTCAACTCTTCAATGGCAGTTTCTTCTGACCACCAAGATCTCAACTTCCAAGCCACCGAGCTTCGCCTCGGCCTCCCCGGCTCCGA
CGAGCCCAATCGCCGCACCGGATCGCACTTGAACAAGAGACCCTTTTCGGAGATTGAAAAAGAAAGTAACAGCAGCGTTGTGGATGCCGGAAATCGCCTTGATCAAACCT
CCCAACCTCCTCCCTCCAAGGCACAAGTTGTTGGATGGCCGCCGGTTCGATCATACCGGAGGAATTGTTTGGCCGGAAAGAAGAGCGAGGCAGAAAGTTCCGGCGGAGTG
TTCGTGAAAGTGAGCATGGACGGAGCTCCATACTTAAGGAAGATTGATTTAACCATTTACAAAAGTTATACAGAGCTTGTAAAGGCCTTAGAAAACATGTTCAAATTCAA
TCTAGTTTGA
Protein sequenceShow/hide protein sequence
MAVSSDHQDLNFQATELRLGLPGSDEPNRRTGSHLNKRPFSEIEKESNSSVVDAGNRLDQTSQPPPSKAQVVGWPPVRSYRRNCLAGKKSEAESSGGVFVKVSMDGAPYL
RKIDLTIYKSYTELVKALENMFKFNLV