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Lsi02G022490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G022490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionlight-inducible protein CPRF2
Genome locationchr02:28965303..28965659
RNA-Seq ExpressionLsi02G022490
SyntenyLsi02G022490
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR020983 - Basic leucine-zipper, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059685.1 light-inducible protein CPRF2 [Cucumis melo var. makuwa]3.8e-4986.67Show/hide
Query:  MAEETVKRVTGVNPLLVAMSQTQMPFVNS-QMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH
        MAEETVKRVTGVNPLLVAMSQTQMPFVNS QMPMQ+NTQFFHQNMSAF NSPP+H NLEVPVPPNPP I HVGRS NDVAT+M+D+PSVHIDHVQKQ MH
Subjt:  MAEETVKRVTGVNPLLVAMSQTQMPFVNS-QMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH

Query:  GSMSAWDSEPSHATPNHKKN
          MS WD+EPSHATPNHKKN
Subjt:  GSMSAWDSEPSHATPNHKKN

XP_008451264.1 PREDICTED: light-inducible protein CPRF2 [Cucumis melo]3.8e-4986.67Show/hide
Query:  MAEETVKRVTGVNPLLVAMSQTQMPFVNS-QMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH
        MAEETVKRVTGVNPLLVAMSQTQMPFVNS QMPMQ+NTQFFHQNMSAF NSPP+H NLEVPVPPNPP I HVGRS NDVAT+M+D+PSVHIDHVQKQ MH
Subjt:  MAEETVKRVTGVNPLLVAMSQTQMPFVNS-QMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH

Query:  GSMSAWDSEPSHATPNHKKN
          MS WD+EPSHATPNHKKN
Subjt:  GSMSAWDSEPSHATPNHKKN

XP_011659270.1 light-inducible protein CPRF2 [Cucumis sativus]3.8e-4986.67Show/hide
Query:  MAEETVKRVTGVNPLLVAMSQTQMPFVN-SQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH
        MAEETVKRVTGVNPLLVAMSQTQMPFVN +QMPMQSNTQFFHQNMSAF NSPP+H NLEVPVPPNPP I HVGRS NDVAT+M+D+PSVHIDHVQKQ MH
Subjt:  MAEETVKRVTGVNPLLVAMSQTQMPFVN-SQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH

Query:  GSMSAWDSEPSHATPNHKKN
          MS WD+EPSHATPNHKKN
Subjt:  GSMSAWDSEPSHATPNHKKN

XP_022953496.1 light-inducible protein CPRF2-like [Cucurbita moschata]2.7e-4783.76Show/hide
Query:  MAEETVKRVTGVNPLLVAMSQTQMPFVNSQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPP-NPPIPHVGRSQNDVATKMSDMPSVHIDHVQKQAMHG
        MAEETVKRVTGVNPLL AMSQ+QMPFV+SQMP QSNTQFFH+NMS F NSPPHH NLE PVP  +PPIPHVGRSQNDVATKM+DMPSVHIDHVQKQ +HG
Subjt:  MAEETVKRVTGVNPLLVAMSQTQMPFVNSQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPP-NPPIPHVGRSQNDVATKMSDMPSVHIDHVQKQAMHG

Query:  SMSAWDSEPSHATPNHK
        +MS WD+EPSHA PNHK
Subjt:  SMSAWDSEPSHATPNHK

XP_038896196.1 light-inducible protein CPRF2 [Benincasa hispida]8.7e-5491.6Show/hide
Query:  MAEETVKRVTGVNPLLVAMSQTQMPFVNSQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPN-PPIPHVGRSQNDVATKMSDMPSVHIDHVQKQAMHG
        MAEETVKRVTGVNPLLVAMSQTQMPFVN+QMPMQSNTQFFHQNMSAF NSPPHH NLEVPVPPN PPIPHVGRSQNDVATK +DMPSVHIDHVQKQA+HG
Subjt:  MAEETVKRVTGVNPLLVAMSQTQMPFVNSQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPN-PPIPHVGRSQNDVATKMSDMPSVHIDHVQKQAMHG

Query:  SMSAWDSEPSHATPNHKKN
         MS WD+EPSHATPNHKKN
Subjt:  SMSAWDSEPSHATPNHKKN

TrEMBL top hitse value%identityAlignment
A0A0A0K5J3 BZIP domain-containing protein1.8e-4986.67Show/hide
Query:  MAEETVKRVTGVNPLLVAMSQTQMPFVN-SQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH
        MAEETVKRVTGVNPLLVAMSQTQMPFVN +QMPMQSNTQFFHQNMSAF NSPP+H NLEVPVPPNPP I HVGRS NDVAT+M+D+PSVHIDHVQKQ MH
Subjt:  MAEETVKRVTGVNPLLVAMSQTQMPFVN-SQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH

Query:  GSMSAWDSEPSHATPNHKKN
          MS WD+EPSHATPNHKKN
Subjt:  GSMSAWDSEPSHATPNHKKN

A0A1S3BS54 light-inducible protein CPRF21.8e-4986.67Show/hide
Query:  MAEETVKRVTGVNPLLVAMSQTQMPFVNS-QMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH
        MAEETVKRVTGVNPLLVAMSQTQMPFVNS QMPMQ+NTQFFHQNMSAF NSPP+H NLEVPVPPNPP I HVGRS NDVAT+M+D+PSVHIDHVQKQ MH
Subjt:  MAEETVKRVTGVNPLLVAMSQTQMPFVNS-QMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH

Query:  GSMSAWDSEPSHATPNHKKN
          MS WD+EPSHATPNHKKN
Subjt:  GSMSAWDSEPSHATPNHKKN

A0A5D3DR38 Light-inducible protein CPRF21.8e-4986.67Show/hide
Query:  MAEETVKRVTGVNPLLVAMSQTQMPFVNS-QMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH
        MAEETVKRVTGVNPLLVAMSQTQMPFVNS QMPMQ+NTQFFHQNMSAF NSPP+H NLEVPVPPNPP I HVGRS NDVAT+M+D+PSVHIDHVQKQ MH
Subjt:  MAEETVKRVTGVNPLLVAMSQTQMPFVNS-QMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPP-IPHVGRSQNDVATKMSDMPSVHIDHVQKQAMH

Query:  GSMSAWDSEPSHATPNHKKN
          MS WD+EPSHATPNHKKN
Subjt:  GSMSAWDSEPSHATPNHKKN

A0A6J1GN50 light-inducible protein CPRF2-like1.3e-4783.76Show/hide
Query:  MAEETVKRVTGVNPLLVAMSQTQMPFVNSQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPP-NPPIPHVGRSQNDVATKMSDMPSVHIDHVQKQAMHG
        MAEETVKRVTGVNPLL AMSQ+QMPFV+SQMP QSNTQFFH+NMS F NSPPHH NLE PVP  +PPIPHVGRSQNDVATKM+DMPSVHIDHVQKQ +HG
Subjt:  MAEETVKRVTGVNPLLVAMSQTQMPFVNSQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPP-NPPIPHVGRSQNDVATKMSDMPSVHIDHVQKQAMHG

Query:  SMSAWDSEPSHATPNHK
        +MS WD+EPSHA PNHK
Subjt:  SMSAWDSEPSHATPNHK

A0A6J1JTX3 light-inducible protein CPRF2-like1.5e-4682.91Show/hide
Query:  MAEETVKRVTGVNPLLVAMSQTQMPFVNSQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPP-NPPIPHVGRSQNDVATKMSDMPSVHIDHVQKQAMHG
        MAEETVKRVTGVNPLLVAMSQ+QMPFV+ +MP QSNTQFFH+NMS F NSPPHH NLE PVP  +PPIPHVGRSQNDVATKM+DMPSVHIDHVQKQ MHG
Subjt:  MAEETVKRVTGVNPLLVAMSQTQMPFVNSQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPP-NPPIPHVGRSQNDVATKMSDMPSVHIDHVQKQAMHG

Query:  SMSAWDSEPSHATPNHK
         MS WD+EPS+A PNHK
Subjt:  SMSAWDSEPSHATPNHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAGAAACAGTGAAAAGAGTGACAGGAGTGAATCCACTGCTTGTTGCAATGTCTCAAACCCAAATGCCATTTGTCAATAGCCAAATGCCTATGCAATCCAACAC
TCAATTCTTCCATCAAAATATGTCTGCATTTGGAAACAGCCCTCCACATCACCATAATTTGGAAGTGCCTGTCCCACCTAATCCTCCCATTCCACATGTTGGAAGATCAC
AGAATGACGTGGCAACCAAAATGTCTGATATGCCCTCTGTGCATATTGATCACGTGCAGAAGCAGGCCATGCATGGCTCTATGTCAGCTTGGGATTCAGAACCTTCCCAT
GCAACTCCAAACCACAAGAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAGAAACAGTGAAAAGAGTGACAGGAGTGAATCCACTGCTTGTTGCAATGTCTCAAACCCAAATGCCATTTGTCAATAGCCAAATGCCTATGCAATCCAACAC
TCAATTCTTCCATCAAAATATGTCTGCATTTGGAAACAGCCCTCCACATCACCATAATTTGGAAGTGCCTGTCCCACCTAATCCTCCCATTCCACATGTTGGAAGATCAC
AGAATGACGTGGCAACCAAAATGTCTGATATGCCCTCTGTGCATATTGATCACGTGCAGAAGCAGGCCATGCATGGCTCTATGTCAGCTTGGGATTCAGAACCTTCCCAT
GCAACTCCAAACCACAAGAAGAATTGA
Protein sequenceShow/hide protein sequence
MAEETVKRVTGVNPLLVAMSQTQMPFVNSQMPMQSNTQFFHQNMSAFGNSPPHHHNLEVPVPPNPPIPHVGRSQNDVATKMSDMPSVHIDHVQKQAMHGSMSAWDSEPSH
ATPNHKKN