CuGenDBv2

Gene ID	Lsi02G022790
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Lysine-rich arabinogalactan protein like
Genome location	chr02:29350394..29351011
RNA-Seq Expression	Lsi02G022790
Synteny	Lsi02G022790
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064057.1 uncharacterized protein E6C27_scaffold99G00600 [Cucumis melo var. makuwa]

2.6e-82

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Query:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV
        M+LE  SAMETLVIVEQYRDEFCYRVK LES RFGN TIK+     HNRL       FRPTPLEISSIPVY FSSPKTPPP A       PI +NG+ICV
Subjt:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV

Query:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL
        NESIDFDEHCCY+RLSFPELWAGPTYSNSPPASSLP+PKFSIRGNRTVSLE PTNSVE++H IVKSAPPSPTRG+THPSSREP H ADSATRTLRRILNL
Subjt:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL

Query:  DVDSE
        DV+SE
Subjt:  DVDSE

KAG7014452.1 hypothetical protein SDJN02_24629, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.2e-72

70.51

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Query:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSA-------ATIPRSSPIL
        M+LE DSAMETLV+VEQYRDEFCY  KTLES R GN TIKEGK KN           FRP PL+ISSIPVY FSSP+TPPPSA       +TI RS+ I 
Subjt:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSA-------ATIPRSSPIL

Query:  MNGEICVNESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTN----SVEEIHPIVKSAPPSPTRG-HTHPSSREPFHGAD
        +N EIC  ES +FDEHCCYERLSFPELWAGPTYSNSPPASSLP+PKFS+ GNRTVSLEFPTN    SVE+IH         PT G +THPS+REPFHGAD
Subjt:  MNGEICVNESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTN----SVEEIHPIVKSAPPSPTRG-HTHPSSREPFHGAD

Query:  SATRTLRRILNLDVDSE
        SATRTLRRILNLD+DSE
Subjt:  SATRTLRRILNLDVDSE

XP_008451331.1 PREDICTED: uncharacterized protein LOC103492654 [Cucumis melo]

1.0e-81

79.51

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Query:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV
        M+LE  SAMETLVIVEQYRDEFCYRVK LES RFGN TIK+     HNRL       FRPTPLEISSIPVY FSSPKTPPP A       PI +NG+ICV
Subjt:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV

Query:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL
        +ESIDFDEHCCY+RLSFPELWAGPTYSNSPPASSLP+PKFSIRGNRTVSLE PTNSVE++H IVKSAPPSPTRG+THPSSREP H ADSATRTLRRILNL
Subjt:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL

Query:  DVDSE
        DV+SE
Subjt:  DVDSE

XP_011659294.1 uncharacterized protein LOC105436159 [Cucumis sativus]

2.0e-82

78.54

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Query:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV
        M+LE  SAMETLVI+EQYRDEFC+R+K LESGRFGN TIK+     HNR        FRPTPLEISSIPVYCFSSPKTPP  A       PI +N + CV
Subjt:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV

Query:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL
        NESIDFD HCCY+RLSFPELWAGPTYSNSPPASSLP+PKFSIRGNRTVSLE PTNSVE+IHPIVKSAPPSPTRGHTHPSSREP HGAD ATRTLRRILNL
Subjt:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL

Query:  DVDSE
        DV+SE
Subjt:  DVDSE

XP_038899008.1 uncharacterized protein LOC120086432 [Benincasa hispida]

5.5e-96

87.32

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Query:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV
        M+LE DSAMETLVIVEQYRDEFCYRVKTLESGRFGN TIK+     HNRLSFQ GTGFRP PLEISSIPVYCFSSPKTPPPSAATIP      ++GEICV
Subjt:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV

Query:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL
        NESIDFDEHCCY+R+SFPELWAGPTYSNSPPASSLP+PKFSIRGNRTVSLE PTNSVE+IHPIVKSAPPSPTRG+THPSSREPFHGADSATRTLRRILNL
Subjt:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL

Query:  DVDSE
        DV+SE
Subjt:  DVDSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5M6 Uncharacterized protein

9.8e-83

78.54

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Query:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV
        M+LE  SAMETLVI+EQYRDEFC+R+K LESGRFGN TIK+     HNR        FRPTPLEISSIPVYCFSSPKTPP  A       PI +N + CV
Subjt:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV

Query:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL
        NESIDFD HCCY+RLSFPELWAGPTYSNSPPASSLP+PKFSIRGNRTVSLE PTNSVE+IHPIVKSAPPSPTRGHTHPSSREP HGAD ATRTLRRILNL
Subjt:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL

Query:  DVDSE
        DV+SE
Subjt:  DVDSE

A0A1S3BR78 uncharacterized protein LOC103492654

4.9e-82

79.51

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Query:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV
        M+LE  SAMETLVIVEQYRDEFCYRVK LES RFGN TIK+     HNRL       FRPTPLEISSIPVY FSSPKTPPP A       PI +NG+ICV
Subjt:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV

Query:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL
        +ESIDFDEHCCY+RLSFPELWAGPTYSNSPPASSLP+PKFSIRGNRTVSLE PTNSVE++H IVKSAPPSPTRG+THPSSREP H ADSATRTLRRILNL
Subjt:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL

Query:  DVDSE
        DV+SE
Subjt:  DVDSE

A0A5D3DRH9 Uncharacterized protein

1.3e-82

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Query:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV
        M+LE  SAMETLVIVEQYRDEFCYRVK LES RFGN TIK+     HNRL       FRPTPLEISSIPVY FSSPKTPPP A       PI +NG+ICV
Subjt:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICV

Query:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL
        NESIDFDEHCCY+RLSFPELWAGPTYSNSPPASSLP+PKFSIRGNRTVSLE PTNSVE++H IVKSAPPSPTRG+THPSSREP H ADSATRTLRRILNL
Subjt:  NESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNL

Query:  DVDSE
        DV+SE
Subjt:  DVDSE

A0A6J1GP91 uncharacterized protein LOC111455884

7.8e-72

71.1

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Query:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSA-------ATIPRSSPIL
        M+LE DSAMETLVIVEQYRDEFCY  KTLES R GN TIKEGK KN           FRP PL+ISSIPVY FSSP+TPPPSA       +TI RS+ I 
Subjt:  MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSA-------ATIPRSSPIL

Query:  MNGEIC-VNESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTN----SVEEIHPIVKSAPPSPTRG-HTHPSSREPFHGA
        +N EIC   ES +FDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFS+ GNRTVSLEFPTN    SVE+IH         PT G +THPS+REPFHGA
Subjt:  MNGEIC-VNESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTN----SVEEIHPIVKSAPPSPTRG-HTHPSSREPFHGA

Query:  DSATRTLRRILNLDVDSE
        DSATRTLRRILNLD+DSE
Subjt:  DSATRTLRRILNLDVDSE

A0A6J1JND6 uncharacterized protein LOC111488454

2.0e-67

69.38

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Query:  METLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSA-------ATIPRSSPILMNGEICVN
        METLVIVEQYRDEFC   KTLES R GN TIKEGK KN           FRP PL+ISSIPVY FSSP+TPPPSA       +TI RS+ I +NGEIC  
Subjt:  METLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSA-------ATIPRSSPILMNGEICVN

Query:  ESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTN----SVEEIHPIVKSAPPSPTRG-HTHPSSREPFHGADSATRTLRR
        ES +FDEHCCYERLSFPELWAGPTYSNSPPA+SLPMPKFS+ GNRTVSL+  TN    SVE+IH         PTRG +THPS  EPFHGADSATRTLRR
Subjt:  ESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTN----SVEEIHPIVKSAPPSPTRG-HTHPSSREPFHGADSATRTLRR

Query:  ILNLDVDSE
        ILNLD+DSE
Subjt:  ILNLDVDSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02715.1 unknown protein

4.9e-26

38.6

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Query:  METLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVY--CFSSPKTPPPSAATIP----------RSSPILMNG
        METL++  ++RD++ Y  K+L   RF +   K    +  N  +FQSG G  P P   SS P+     S  ++P    + +P          R+SPI +  
Subjt:  METLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVY--CFSSPKTPPPSAATIP----------RSSPILMNG

Query:  ------EICVNESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPT-NSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADS
                C +E +D         LS+ ELWAGPTYSNSPP +S+P+PKFS++  RTVSL FP  +S  +I  + KSAP SPT      S   PF    S
Subjt:  ------EICVNESIDFDEHCCYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPT-NSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADS

Query:  ATRTLRRILNLDVDS
        AT TLRR+LNL++++
Subjt:  ATRTLRRILNLDVDS

Sequences

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CDS sequence

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ATGGTTTTGGAGTCTGATTCAGCGATGGAAACATTGGTGATTGTAGAACAGTACAGAGATGAGTTCTGCTATCGTGTCAAAACTCTAGAATCGGGTCGATTTGGGAATTT
TACGATTAAAGAAGGAAAAGGGAAAAATCATAATCGATTGAGTTTTCAGTCAGGGACAGGATTTCGCCCTACTCCATTGGAGATTTCTTCAATTCCTGTTTATTGCTTTT
CTTCCCCCAAAACACCACCCCCTTCCGCCGCAACAATTCCGAGAAGTTCCCCGATTCTGATGAATGGGGAAATTTGTGTTAATGAGAGCATTGATTTCGATGAACATTGC
TGTTATGAGAGGCTATCATTTCCTGAGCTTTGGGCTGGACCAACTTACTCAAATTCACCCCCTGCAAGTTCACTGCCAATGCCCAAATTTTCAATTCGAGGAAATAGAAC
AGTGTCACTCGAATTTCCCACCAATTCAGTTGAAGAAATTCACCCAATTGTGAAATCTGCACCACCATCCCCAACTAGGGGCCATACTCATCCTTCTTCAAGAGAGCCAT
TCCATGGTGCTGATTCTGCTACAAGAACACTTAGAAGAATCCTTAACCTTGATGTTGACTCTGAATGA

mRNA sequence

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Protein sequence

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MVLESDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATIPRSSPILMNGEICVNESIDFDEHC
CYERLSFPELWAGPTYSNSPPASSLPMPKFSIRGNRTVSLEFPTNSVEEIHPIVKSAPPSPTRGHTHPSSREPFHGADSATRTLRRILNLDVDSE

Lsi02G022790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome