; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G023000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:29588431..29591597
RNA-Seq ExpressionLsi02G023000
SyntenyLsi02G023000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022953989.1 uncharacterized protein LOC111456382 isoform X1 [Cucurbita moschata]2.4e-8883.25Show/hide
Query:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF
        MAA+ELRVEEA+PWLPSQVLDEACDIKV+MRQ HHH QQPYFL RQRRHDRPLLS SDFALS NQKSK SNV S PH RQKPA +AANWTAGGHGMQAIF
Subjt:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF

Query:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE
        LD GRQLGGTGVFLPRGTG T+YQPNKKPACSMVLVPARVVQALNLDVQAL        DPK NQ GRECNS+VKNKKGKDV    CSFVS+NQ +SSQE
Subjt:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE

Query:  IFLPKEWTY
        IFLPKEWTY
Subjt:  IFLPKEWTY

XP_022992554.1 uncharacterized protein LOC111488842 isoform X1 [Cucurbita maxima]2.4e-8882.46Show/hide
Query:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF
        MAA+ELRVEEAMPWLPSQVLDEACDIKV+MRQ HHH QQPYFL RQR HDRPLLS SDFALS NQKSK SNV S PH RQKPA +AANWTAGGHGMQAIF
Subjt:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF

Query:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL----------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSS
        LD GRQLGGTGVFLPRGTGGT+YQPNKKPACSMVLVPARVVQALNLDVQAL          DPK N+ GRECNS+VKNKKGKDV   +CSFVS+NQ +SS
Subjt:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL----------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSS

Query:  QEIFLPKEWTY
        QEIFLPKEWTY
Subjt:  QEIFLPKEWTY

XP_023548800.1 uncharacterized protein LOC111807346 isoform X1 [Cucurbita pepo subsp. pepo]4.9e-8983.73Show/hide
Query:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF
        MAA+ELRVEEA+PWLPSQVLDEACDIKV+MRQ HHH QQPYFL RQRRHDRPLLS SDFALS NQKSK SNV S PH RQKPA +AANWTAGGHGMQAIF
Subjt:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF

Query:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE
        LD GRQLGGTGVFLPRGTGGT+YQPNKKPACSMVLVPARVVQALNLDVQAL        DPK NQ GRECNS+VKNKKGKDV    CSFVS+NQ +SSQE
Subjt:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE

Query:  IFLPKEWTY
        IFLPKEWTY
Subjt:  IFLPKEWTY

XP_038899697.1 uncharacterized protein LOC120086955 isoform X1 [Benincasa hispida]1.3e-9788.52Show/hide
Query:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF
        MAADELRVEEAMPWLP+QVLDEACDIKV+M+Q+HHHIQQPYFLH  RRHDRPLLSPSDF+LSPNQKSK +NVCSRPH RQKPAAA ANWTAGGHGMQAIF
Subjt:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF

Query:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE
        LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL        +PK+NQKGRECNSIVKNKKGKDVTST+CS +SQNQTNSSQE
Subjt:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE

Query:  IFLPKEWTY
        IFLPKEWTY
Subjt:  IFLPKEWTY

XP_038899698.1 uncharacterized protein LOC120086955 isoform X2 [Benincasa hispida]6.0e-9587.56Show/hide
Query:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF
        MAADELRVEEAMPWLP+QVLDEACDIKV+M+Q+HHHIQQPYFLH  RRHDRPLLSPSDF+LSP  KSK +NVCSRPH RQKPAAA ANWTAGGHGMQAIF
Subjt:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF

Query:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE
        LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL        +PK+NQKGRECNSIVKNKKGKDVTST+CS +SQNQTNSSQE
Subjt:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE

Query:  IFLPKEWTY
        IFLPKEWTY
Subjt:  IFLPKEWTY

TrEMBL top hitse value%identityAlignment
A0A0A0KAI7 Uncharacterized protein2.6e-8883.1Show/hide
Query:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQN-HHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAI
        MAAD+L VEEAMPWLPSQVLDEACDIKV+ RQ+ HHHI QP FLHRQR H RP LSPSDFALS N+KSK SN CSRPH RQKPAAAA NWTAGGHGMQAI
Subjt:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQN-HHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAI

Query:  FLDSGRQLGGTGVFLPRGTGG-TSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGREC-NSIVKNKKGKDVTSTHCSFVSQNQTNS
        FLDSGRQLGGTGVFLPRGTGG T+YQPN+KPACSMVLVPARVV+ALNLDVQAL        + KNNQKGREC NSIVKNKK KDVTSTHCSF+SQNQTNS
Subjt:  FLDSGRQLGGTGVFLPRGTGG-TSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGREC-NSIVKNKKGKDVTSTHCSFVSQNQTNS

Query:  SQE-IFLPKEWTY
        SQ+ IFLPKEWTY
Subjt:  SQE-IFLPKEWTY

A0A6J1GR68 uncharacterized protein LOC111456382 isoform X24.2e-8682.3Show/hide
Query:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF
        MAA+ELRVEEA+PWLPSQVLDEACDIKV+MRQ HHH QQPYFL RQRRHDRPLLS SDFALS   KSK SNV S PH RQKPA +AANWTAGGHGMQAIF
Subjt:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF

Query:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE
        LD GRQLGGTGVFLPRGTG T+YQPNKKPACSMVLVPARVVQALNLDVQAL        DPK NQ GRECNS+VKNKKGKDV    CSFVS+NQ +SSQE
Subjt:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE

Query:  IFLPKEWTY
        IFLPKEWTY
Subjt:  IFLPKEWTY

A0A6J1GRJ3 uncharacterized protein LOC111456382 isoform X11.2e-8883.25Show/hide
Query:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF
        MAA+ELRVEEA+PWLPSQVLDEACDIKV+MRQ HHH QQPYFL RQRRHDRPLLS SDFALS NQKSK SNV S PH RQKPA +AANWTAGGHGMQAIF
Subjt:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF

Query:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE
        LD GRQLGGTGVFLPRGTG T+YQPNKKPACSMVLVPARVVQALNLDVQAL        DPK NQ GRECNS+VKNKKGKDV    CSFVS+NQ +SSQE
Subjt:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL--------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQE

Query:  IFLPKEWTY
        IFLPKEWTY
Subjt:  IFLPKEWTY

A0A6J1JW11 uncharacterized protein LOC111488842 isoform X24.2e-8681.52Show/hide
Query:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF
        MAA+ELRVEEAMPWLPSQVLDEACDIKV+MRQ HHH QQPYFL RQR HDRPLLS SDFALS   KSK SNV S PH RQKPA +AANWTAGGHGMQAIF
Subjt:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF

Query:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL----------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSS
        LD GRQLGGTGVFLPRGTGGT+YQPNKKPACSMVLVPARVVQALNLDVQAL          DPK N+ GRECNS+VKNKKGKDV   +CSFVS+NQ +SS
Subjt:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL----------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSS

Query:  QEIFLPKEWTY
        QEIFLPKEWTY
Subjt:  QEIFLPKEWTY

A0A6J1JXV2 uncharacterized protein LOC111488842 isoform X11.2e-8882.46Show/hide
Query:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF
        MAA+ELRVEEAMPWLPSQVLDEACDIKV+MRQ HHH QQPYFL RQR HDRPLLS SDFALS NQKSK SNV S PH RQKPA +AANWTAGGHGMQAIF
Subjt:  MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIF

Query:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL----------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSS
        LD GRQLGGTGVFLPRGTGGT+YQPNKKPACSMVLVPARVVQALNLDVQAL          DPK N+ GRECNS+VKNKKGKDV   +CSFVS+NQ +SS
Subjt:  LDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL----------DPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSS

Query:  QEIFLPKEWTY
        QEIFLPKEWTY
Subjt:  QEIFLPKEWTY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54000.1 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3.6e-0536.36Show/hide
Query:  MQAIFL---DSGRQLGGTGVFLPRGTGGTS-YQPNKKPACSMVLVPARVVQALNLDVQALDPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQ
        M+A+F+      R   GTGVFLPR    TS  +  +KP  S VLVPAR+ Q LNL++   +P  +       S  +       +S     V   Q  S Q
Subjt:  MQAIFL---DSGRQLGGTGVFLPRGTGGTS-YQPNKKPACSMVLVPARVVQALNLDVQALDPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQ

Query:  EIFLPKEWTY
        E  LP EW Y
Subjt:  EIFLPKEWTY

AT4G02830.1 unknown protein1.3e-1040Show/hide
Query:  ANW--TAGGHGMQAIFL-DSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDV--QALDPKNNQKGRECNSIVKNKKGKDVTSTHCSF
        +NW  + G   MQA FL   GR   GTGVFLP      S+ P KK ACS VL+P RVVQALNL++    +      + RE +S    KK + + +T    
Subjt:  ANW--TAGGHGMQAIFL-DSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDV--QALDPKNNQKGRECNSIVKNKKGKDVTSTHCSF

Query:  VSQNQTNSSQEIFLPKEWTY
         ++N  +S +++ LP+EW Y
Subjt:  VSQNQTNSSQEIFLPKEWTY

AT4G02830.2 unknown protein1.3e-1040Show/hide
Query:  ANW--TAGGHGMQAIFL-DSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDV--QALDPKNNQKGRECNSIVKNKKGKDVTSTHCSF
        +NW  + G   MQA FL   GR   GTGVFLP      S+ P KK ACS VL+P RVVQALNL++    +      + RE +S    KK + + +T    
Subjt:  ANW--TAGGHGMQAIFL-DSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDV--QALDPKNNQKGRECNSIVKNKKGKDVTSTHCSF

Query:  VSQNQTNSSQEIFLPKEWTY
         ++N  +S +++ LP+EW Y
Subjt:  VSQNQTNSSQEIFLPKEWTY

AT5G59050.1 unknown protein5.9e-0834.4Show/hide
Query:  GMQAIFLD-SGRQL--GGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQALDPKNNQKG---RECNSIVKNKKGKDVTSTHCSFVSQNQTN
        G++A+F+D SG +   GGTGVFLPRG  GT  +  KK  CS V++PARVV+AL +    L   +          ++++ +   K + S   + +S+ Q+ 
Subjt:  GMQAIFLD-SGRQL--GGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQALDPKNNQKG---RECNSIVKNKKGKDVTSTHCSFVSQNQTN

Query:  SSQEI------------FLPKEWTY
        S  E+             LP+EWTY
Subjt:  SSQEI------------FLPKEWTY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGACGAACTTCGTGTAGAAGAAGCAATGCCATGGCTTCCTAGTCAAGTTCTTGACGAAGCTTGCGATATCAAGGTGTTTATGAGGCAAAACCACCACCACAT
ACAACAACCTTACTTCCTCCATCGCCAACGGCGACACGATCGTCCTCTGTTATCGCCGTCCGATTTCGCTCTTTCACCGAATCAGAAATCGAAGTGCAGTAATGTCTGTT
CTCGGCCGCACCTGAGGCAAAAACCAGCGGCTGCGGCGGCGAATTGGACGGCTGGAGGACATGGAATGCAAGCGATTTTTCTCGATTCCGGCCGGCAATTAGGCGGTACC
GGCGTTTTTCTTCCTCGGGGAACAGGCGGCACCAGTTACCAACCAAACAAGAAGCCAGCTTGTTCCATGGTGCTTGTCCCTGCTCGTGTTGTTCAAGCTCTTAATCTCGA
TGTTCAAGCATTAGACCCCAAAAACAACCAAAAGGGAAGAGAATGCAACTCAATAGTGAAAAACAAGAAGGGCAAAGATGTAACATCCACACATTGCTCCTTCGTGTCCC
AAAATCAAACCAATTCATCCCAAGAGATATTCCTTCCTAAAGAATGGACCTATTAA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTCTCATCAATTCTCTGAATCTAGAGAGACAAACAAAAACTGAAACCAAAAATCTCTCTCTCTGTTTCACTTCCATGGCTGCCGACGAACTTCGTGTAGAAGA
AGCAATGCCATGGCTTCCTAGTCAAGTTCTTGACGAAGCTTGCGATATCAAGGTGTTTATGAGGCAAAACCACCACCACATACAACAACCTTACTTCCTCCATCGCCAAC
GGCGACACGATCGTCCTCTGTTATCGCCGTCCGATTTCGCTCTTTCACCGAATCAGAAATCGAAGTGCAGTAATGTCTGTTCTCGGCCGCACCTGAGGCAAAAACCAGCG
GCTGCGGCGGCGAATTGGACGGCTGGAGGACATGGAATGCAAGCGATTTTTCTCGATTCCGGCCGGCAATTAGGCGGTACCGGCGTTTTTCTTCCTCGGGGAACAGGCGG
CACCAGTTACCAACCAAACAAGAAGCCAGCTTGTTCCATGGTGCTTGTCCCTGCTCGTGTTGTTCAAGCTCTTAATCTCGATGTTCAAGCATTAGACCCCAAAAACAACC
AAAAGGGAAGAGAATGCAACTCAATAGTGAAAAACAAGAAGGGCAAAGATGTAACATCCACACATTGCTCCTTCGTGTCCCAAAATCAAACCAATTCATCCCAAGAGATA
TTCCTTCCTAAAGAATGGACCTATTAATGTCCAAATTAATTCATATTTTACAATGTATGAAAAACTTCATAATGCAAGCTAGGGAGCTAGCTCTTTAAATGATTTCATTC
TAATGTACATTTTAATAATCCGTCAAATTGTAATGTTCATTTTTACCGGTAAATCAAATATCATTTCTGTC
Protein sequenceShow/hide protein sequence
MAADELRVEEAMPWLPSQVLDEACDIKVFMRQNHHHIQQPYFLHRQRRHDRPLLSPSDFALSPNQKSKCSNVCSRPHLRQKPAAAAANWTAGGHGMQAIFLDSGRQLGGT
GVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQALDPKNNQKGRECNSIVKNKKGKDVTSTHCSFVSQNQTNSSQEIFLPKEWTY