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Lsi02G023060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzinc transporter 5
Genome locationchr02:29663937..29668198
RNA-Seq ExpressionLsi02G023060
SyntenyLsi02G023060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057606.1 hypothetical protein E6C27_scaffold497G00830 [Cucumis melo var. makuwa]6.0e-5278.63Show/hide
Query:  GQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQQLDSECICGLLS
        GQW QPP VAPRPLCASQIALANYACA LPYS +LPPPPPSSSLS NH+SQG+P HTH HGH HR    H H IPLSP+EENCCKWVQQ+DSEC+C LLS
Subjt:  GQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQQLDSECICGLLS

Query:  RLPAFLERPQHNFSVTVGG--SCDATYSCGG
        RLPAFL+RP HNFSV +GG  SC+ATYSCGG
Subjt:  RLPAFLERPQHNFSVTVGG--SCDATYSCGG

KAG7014427.1 hypothetical protein SDJN02_24604, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-4372.73Show/hide
Query:  VTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQ
        VTLFLALI +TE QW QPP VAPRP C SQIALAN ACAMLPYST +   PPS SLSDNHES G P +   H H   H HGHQH I LSPMEENCCKWVQ
Subjt:  VTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQ

Query:  QLDSECICGLLSRLPAFLERPQHNFSVTVGGS
        QLDS+C+C LLSRLPAFLERPQH  S +VGG+
Subjt:  QLDSECICGLLSRLPAFLERPQHNFSVTVGGS

XP_023548911.1 uncharacterized protein LOC111807420 [Cucurbita pepo subsp. pepo]5.6e-5074.65Show/hide
Query:  VTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQ
        VTLFLALI +TE QW QPP VAPRP C SQIALAN ACAMLPYST +   PPS SLSDNHES G P +   H H H H HGHQH I LSPMEENCCKWVQ
Subjt:  VTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQ

Query:  QLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGGG
        QLDS+C+C LLSRLPAFLERPQH  S +VGGSC+AT+SCGGG
Subjt:  QLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGGG

XP_031744964.1 uncharacterized protein LOC116405195 [Cucumis sativus]8.3e-5473.76Show/hide
Query:  VTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQ
        V LFL LIT++E QW QPP VAPRPLCASQI LANYACA LPY+ + PPPPPSSSLS+N +SQG+P H H HGH HR    H H IPL+P+EENCCKWVQ
Subjt:  VTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQ

Query:  QLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGG
        Q+DSEC+C LLSRLPAFL+RP HNFSVT+GGSC+ATY CGG
Subjt:  QLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGG

XP_038899044.1 uncharacterized protein LOC120086453 [Benincasa hispida]7.5e-7191.72Show/hide
Query:  VTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQ
        VTLFLALIT+TEGQW QPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPS SLSDNHESQG+P+  HRH HQH H HGHQ  IPLSPMEENCCKWVQ
Subjt:  VTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQ

Query:  QLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGGGIKI
        QLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGGGIKI
Subjt:  QLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGGGIKI

TrEMBL top hitse value%identityAlignment
A0A0A0KAN7 Uncharacterized protein4.0e-5473.76Show/hide
Query:  VTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQ
        V LFL LIT++E QW QPP VAPRPLCASQI LANYACA LPY+ + PPPPPSSSLS+N +SQG+P H H HGH HR    H H IPL+P+EENCCKWVQ
Subjt:  VTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQ

Query:  QLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGG
        Q+DSEC+C LLSRLPAFL+RP HNFSVT+GGSC+ATY CGG
Subjt:  QLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGG

A0A0B2QE80 Uncharacterized protein2.8e-3148.97Show/hide
Query:  MIVTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKW
        + +TLFLA++ + E Q +  P   PRPLCASQ AL NYAC+ LP+S  +PP  PS    +N+    +  H HRHGH+HRH   HQ     +P E+NCC+W
Subjt:  MIVTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKW

Query:  VQQLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGGGI
         +++D +C+C LL RLP FL RP H +++ VG SCD TYSCG  I
Subjt:  VQQLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGGGI

A0A5A7UTY5 Uncharacterized protein2.9e-5278.63Show/hide
Query:  GQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQQLDSECICGLLS
        GQW QPP VAPRPLCASQIALANYACA LPYS +LPPPPPSSSLS NH+SQG+P HTH HGH HR    H H IPLSP+EENCCKWVQQ+DSEC+C LLS
Subjt:  GQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQQLDSECICGLLS

Query:  RLPAFLERPQHNFSVTVGG--SCDATYSCGG
        RLPAFL+RP HNFSV +GG  SC+ATYSCGG
Subjt:  RLPAFLERPQHNFSVTVGG--SCDATYSCGG

A0A6P4AZX7 uncharacterized protein DDB_G02727242.4e-3049.65Show/hide
Query:  MIVTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKW
        M+    L L+ + E Q    P VAPRPLCASQ ALA+YAC+++P++ + P PP   S  D         H HRHGH HRH H H+H    SP EE+CC+W
Subjt:  MIVTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKW

Query:  VQQLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGG
        ++QLDS+C+C +L  LP FL RP H +SV VG +CD T+SC G
Subjt:  VQQLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGG

K7MYJ6 Uncharacterized protein2.4e-3047.3Show/hide
Query:  MIVTLFLALITETEGQWR---QPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENC
        + +T+FLAL+ + E   R    P    PRPLCASQ AL NYAC+ LP+S  +PP  PS+  S N E +G  ++ H   H+H H HGH+H    +  E+NC
Subjt:  MIVTLFLALITETEGQWR---QPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENC

Query:  CKWVQQLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGGGI
        C+W +++D++C+C LL RLP FL RP H +++ VG SCD TYSCG  I
Subjt:  CKWVQQLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGGGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.5e-1830.04Show/hide
Query:  VTLFLALITETEGQ--WRQPPDVAPRPLCASQIALANYACAMLPYSTVLPP----PPPS---------------------------------SSLSDNHE
        VTL LAL + T GQ   + PP   PRPLCASQ ALANYAC+ LP  TV PP    PPP+                                     D+H+
Subjt:  VTLFLALITETEGQ--WRQPPDVAPRPLCASQIALANYACAMLPYSTVLPP----PPPS---------------------------------SSLSDNHE

Query:  SQGTPSHTH---------------------------------------------------------------RHGHQHRHPHGHQHMIPLSPMEENCCKW
              H H                                                               R  H+H H H H+H       +E CCKW
Subjt:  SQGTPSHTH---------------------------------------------------------------RHGHQHRHPHGHQHMIPLSPMEENCCKW

Query:  VQQLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGG
        ++Q+D+EC+C LL RLP  L +P HN++V V  SC  T+ CGG
Subjt:  VQQLDSECICGLLSRLPAFLERPQHNFSVTVGGSCDATYSCGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTAACGTTGTTCTTGGCTCTGATTACTGAAACAGAGGGTCAATGGCGGCAGCCACCGGACGTTGCTCCTCGACCACTCTGCGCCTCCCAGATTGCACTAGCAAA
CTATGCTTGCGCAATGTTGCCTTACTCCACAGTCCTGCCACCTCCACCTCCATCATCATCACTCTCTGATAACCATGAAAGCCAAGGCACTCCCAGCCACACACACCGGC
ACGGACACCAGCACAGACACCCGCATGGACACCAGCACATGATCCCGCTATCGCCAATGGAGGAGAATTGTTGCAAGTGGGTGCAGCAGTTGGATAGTGAATGTATATGC
GGGCTGTTGTCCCGGTTGCCTGCATTCCTAGAGAGGCCTCAGCATAACTTTTCTGTTACCGTTGGCGGTTCGTGTGATGCTACATACTCGTGCGGAGGAGGAATCAAAAT
CTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTAACGTTGTTCTTGGCTCTGATTACTGAAACAGAGGGTCAATGGCGGCAGCCACCGGACGTTGCTCCTCGACCACTCTGCGCCTCCCAGATTGCACTAGCAAA
CTATGCTTGCGCAATGTTGCCTTACTCCACAGTCCTGCCACCTCCACCTCCATCATCATCACTCTCTGATAACCATGAAAGCCAAGGCACTCCCAGCCACACACACCGGC
ACGGACACCAGCACAGACACCCGCATGGACACCAGCACATGATCCCGCTATCGCCAATGGAGGAGAATTGTTGCAAGTGGGTGCAGCAGTTGGATAGTGAATGTATATGC
GGGCTGTTGTCCCGGTTGCCTGCATTCCTAGAGAGGCCTCAGCATAACTTTTCTGTTACCGTTGGCGGTTCGTGTGATGCTACATACTCGTGCGGAGGAGGAATCAAAAT
CTAA
Protein sequenceShow/hide protein sequence
MIVTLFLALITETEGQWRQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPPPSSSLSDNHESQGTPSHTHRHGHQHRHPHGHQHMIPLSPMEENCCKWVQQLDSECIC
GLLSRLPAFLERPQHNFSVTVGGSCDATYSCGGGIKI