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Lsi02G023140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:29743440..29745897
RNA-Seq ExpressionLsi02G023140
SyntenyLsi02G023140
Gene Ontology termsGO:0006811 - ion transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005488 - binding (molecular function)
GO:0019829 - ATPase-coupled cation transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057596.1 hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa]3.7e-6661.48Show/hide
Query:  MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPA------PIGKRAQFPAGENAAPALMSVPAPETTIDNVSNHH--KNP
        MASNEGV S++M+I+ GLVKISG +N DPSIFVK IAK GKKA+F A +N+APA      PIG+  QFP  EN         AP  T DN S HH     
Subjt:  MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPA------PIGKRAQFPAGENAAPALMSVPAPETTIDNVSNHH--KNP

Query:  SINSDNHCYKIDRTQH-GNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQ-FMR---------PQSQYGGVGFRGSHGFWPRMSEP---PRPPPPP
        SINS+NHC K +RT H GNS +G+FSDH   SDKVHINEAAAVNPPV LPL N+ FMR         P  QYG + FRGSHGFWP MSEP     PPPPP
Subjt:  SINSDNHCYKIDRTQH-GNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQ-FMR---------PQSQYGGVGFRGSHGFWPRMSEP---PRPPPPP

Query:  ---MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG
           M P H YYRW EP+PYYLQEQ  PVGN P HYLFNDENTEG
Subjt:  ---MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG

KAG6593135.1 hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sororia]5.6e-3043.29Show/hide
Query:  MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPAPIGKRAQFPAGENAAPALMSVPAPETTIDNVSNHHKNPSINSDNHC
        MA+NE V S+ +DI+ GLV I+     DP   V+A+++ GK A+   M   APAP    A                      D+V  H   PS  SD HC
Subjt:  MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPAPIGKRAQFPAGENAAPALMSVPAPETTIDNVSNHHKNPSINSDNHC

Query:  YKIDRTQHGNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPL-HNQFMRPQSQYGGVGFRGSHGFWPRMSEP---PRPP------PPPMPPAHRYYRWSE
         KID TQ+   G          S KVH NEAA   PPV +P  H   +RP SQ+GGVG   S GF   M EP   P PP      PP MPP   YYRWSE
Subjt:  YKIDRTQHGNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPL-HNQFMRPQSQYGGVGFRGSHGFWPRMSEP---PRPP------PPPMPPAHRYYRWSE

Query:  PLPYYLQEQSTP---VGNAPGHYLFNDENTE
        P PYY Q+Q  P   V  APGHYLFNDEN +
Subjt:  PLPYYLQEQSTP---VGNAPGHYLFNDENTE

KGN45423.2 hypothetical protein Csa_015802, partial [Cucumis sativus]3.3e-4659.14Show/hide
Query:  MKNT-APAPIGKRAQFPAGENAAPALMSVPAPETTIDNVSNH--HKNPSINSDNHCYKIDRTQHGNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHN
        M+NT AP+PI +  QFP  EN   A    PA  T+ DN S H  H + SINS+NHC K D    GNS +G+FSDH  W DKVHINEAA+VNPPVALPLHN
Subjt:  MKNT-APAPIGKRAQFPAGENAAPALMSVPAPETTIDNVSNH--HKNPSINSDNHCYKIDRTQHGNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHN

Query:  QFMR----------PQSQYGG-VGFRGSHGFWPRMSEPPRPPPPPMPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG
        + +           P  QYG  +GFRGSHGFWP MSEP   P  P PP H YYRW EP+PYYLQEQ  PVGN P HY+FNDENTEG
Subjt:  QFMR----------PQSQYGG-VGFRGSHGFWPRMSEPPRPPPPPMPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG

TYK20998.1 hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa]6.8e-4464.2Show/hide
Query:  APETTIDNVSNHH--KNPSINSDNHCYKIDRTQH-GNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQ-FMR---------PQSQYGGVGFRGSHG
        AP  T DN S HH     SINS+NHC K +RT H GNS +G+FSDH   SDKVHINEAAAVNPPV LPL N+ FMR         P  QYG + FRGSHG
Subjt:  APETTIDNVSNHH--KNPSINSDNHCYKIDRTQH-GNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQ-FMR---------PQSQYGGVGFRGSHG

Query:  FWPRMSEP---PRPPPPP---MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG
        FWP MSEP     PPPPP   M P H YYRW EP+PYYLQEQ  PVGN P HYLFNDENTEG
Subjt:  FWPRMSEP---PRPPPPP---MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG

TrEMBL top hitse value%identityAlignment
A0A0A0K5U2 Uncharacterized protein4.4e-6561.37Show/hide
Query:  MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNT-APAPIGKRAQFPAGENAAPALMSVPAPETTIDNVSNH--HKNPSINSD
        MASNEGV S++M+IE GLVKISG  N DP IF+K I KAGKKA+F AM+NT AP+PI +  QFP  EN   A    PA  T+ DN S H  H + SINS+
Subjt:  MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNT-APAPIGKRAQFPAGENAAPALMSVPAPETTIDNVSNH--HKNPSINSD

Query:  NHCYKIDRTQHGNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQFMR----------PQSQYGG-VGFRGSHGFWPRMSEPPRPPPPPMPPAHRYY
        NHC K D    GNS +G+FSDH  W DKVHINEAA+VNPPVALPLHN+ +           P  QYG  +GFRGSHGFWP MSEP   P  P PP H YY
Subjt:  NHCYKIDRTQHGNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQFMR----------PQSQYGG-VGFRGSHGFWPRMSEPPRPPPPPMPPAHRYY

Query:  RWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG
        RW EP+PYYLQEQ  PVGN P HY+FNDENTEG
Subjt:  RWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG

A0A5A7UTY4 Uncharacterized protein1.8e-6661.48Show/hide
Query:  MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPA------PIGKRAQFPAGENAAPALMSVPAPETTIDNVSNHH--KNP
        MASNEGV S++M+I+ GLVKISG +N DPSIFVK IAK GKKA+F A +N+APA      PIG+  QFP  EN         AP  T DN S HH     
Subjt:  MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPA------PIGKRAQFPAGENAAPALMSVPAPETTIDNVSNHH--KNP

Query:  SINSDNHCYKIDRTQH-GNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQ-FMR---------PQSQYGGVGFRGSHGFWPRMSEP---PRPPPPP
        SINS+NHC K +RT H GNS +G+FSDH   SDKVHINEAAAVNPPV LPL N+ FMR         P  QYG + FRGSHGFWP MSEP     PPPPP
Subjt:  SINSDNHCYKIDRTQH-GNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQ-FMR---------PQSQYGGVGFRGSHGFWPRMSEP---PRPPPPP

Query:  ---MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG
           M P H YYRW EP+PYYLQEQ  PVGN P HYLFNDENTEG
Subjt:  ---MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG

A0A5D3DBX5 Uncharacterized protein3.3e-4464.2Show/hide
Query:  APETTIDNVSNHH--KNPSINSDNHCYKIDRTQH-GNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQ-FMR---------PQSQYGGVGFRGSHG
        AP  T DN S HH     SINS+NHC K +RT H GNS +G+FSDH   SDKVHINEAAAVNPPV LPL N+ FMR         P  QYG + FRGSHG
Subjt:  APETTIDNVSNHH--KNPSINSDNHCYKIDRTQH-GNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQ-FMR---------PQSQYGGVGFRGSHG

Query:  FWPRMSEP---PRPPPPP---MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG
        FWP MSEP     PPPPP   M P H YYRW EP+PYYLQEQ  PVGN P HYLFNDENTEG
Subjt:  FWPRMSEP---PRPPPPP---MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAATGAAGGAGTCGTTTCCATAGACATGGATATAGAAGCAGGATTGGTAAAAATCAGTGGAGGAAACAACTTGGATCCATCAATCTTTGTAAAAGCAATTGC
AAAAGCTGGCAAAAAAGCAAAATTTTCGGCCATGAAGAATACGGCACCGGCACCGATTGGGAAAAGGGCACAATTTCCAGCTGGGGAGAATGCGGCACCGGCACTGATGT
CGGTGCCGGCGCCGGAAACCACCATTGACAATGTTTCGAATCATCATAAGAACCCTTCCATTAATTCAGACAATCACTGTTATAAAATTGACAGGACTCAACATGGCAAT
TCCGGTTCCGGCCATTTTTCCGACCACCATGGCTGGTCCGACAAGGTTCACATCAACGAGGCGGCCGCCGTCAATCCGCCAGTGGCTCTGCCACTTCACAACCAGTTTAT
GCGACCGCAGTCGCAATATGGAGGTGTGGGTTTTCGTGGAAGTCATGGTTTTTGGCCTCGAATGTCGGAACCGCCACGGCCACCACCACCACCAATGCCACCGGCACATA
GATATTATCGGTGGTCGGAACCCCTACCTTATTATTTGCAGGAGCAATCGACACCGGTGGGGAATGCGCCGGGGCACTACCTATTCAACGACGAGAATACAGAAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAATGAAGGAGTCGTTTCCATAGACATGGATATAGAAGCAGGATTGGTAAAAATCAGTGGAGGAAACAACTTGGATCCATCAATCTTTGTAAAAGCAATTGC
AAAAGCTGGCAAAAAAGCAAAATTTTCGGCCATGAAGAATACGGCACCGGCACCGATTGGGAAAAGGGCACAATTTCCAGCTGGGGAGAATGCGGCACCGGCACTGATGT
CGGTGCCGGCGCCGGAAACCACCATTGACAATGTTTCGAATCATCATAAGAACCCTTCCATTAATTCAGACAATCACTGTTATAAAATTGACAGGACTCAACATGGCAAT
TCCGGTTCCGGCCATTTTTCCGACCACCATGGCTGGTCCGACAAGGTTCACATCAACGAGGCGGCCGCCGTCAATCCGCCAGTGGCTCTGCCACTTCACAACCAGTTTAT
GCGACCGCAGTCGCAATATGGAGGTGTGGGTTTTCGTGGAAGTCATGGTTTTTGGCCTCGAATGTCGGAACCGCCACGGCCACCACCACCACCAATGCCACCGGCACATA
GATATTATCGGTGGTCGGAACCCCTACCTTATTATTTGCAGGAGCAATCGACACCGGTGGGGAATGCGCCGGGGCACTACCTATTCAACGACGAGAATACAGAAGGGTGA
Protein sequenceShow/hide protein sequence
MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPAPIGKRAQFPAGENAAPALMSVPAPETTIDNVSNHHKNPSINSDNHCYKIDRTQHGN
SGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQFMRPQSQYGGVGFRGSHGFWPRMSEPPRPPPPPMPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEG