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Lsi02G023150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSignal peptidase complex subunit 1
Genome locationchr02:29748976..29751239
RNA-Seq ExpressionLsi02G023150
SyntenyLsi02G023150
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006465 - signal peptide processing (biological process)
GO:0045047 - protein targeting to ER (biological process)
GO:0005787 - signal peptidase complex (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR009542 - Signal peptidase complex subunit Spc1/SPCS1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51679.1 hypothetical protein Csa_009252 [Cucumis sativus]2.7e-3787.1Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQ+MLVAFAVV F TGYVMGSF++MILVYA  VFLTTLITVPNWPFFNRHPL WLDP +A+KYPKPQPQEPVVLKKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

XP_004135313.1 probable signal peptidase complex subunit 1 [Cucumis sativus]2.7e-3787.1Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQ+MLVAFAVV F TGYVMGSF++MILVYA  VFLTTLITVPNWPFFNRHPL WLDP +A+KYPKPQPQEPVVLKKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

XP_008446045.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo]3.5e-3788.17Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQIMLVAFAVV F TGYVMGSF+MMILVYA  VFLTTLITVPNWPFFNRHPL WLDP +A+KYPKPQPQEPVV KKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

XP_023549840.1 probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo]1.9e-3584.95Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQ+MQIMLVAFAVV F TGYVM SF+MM+LVYA  V LTTLITVPNWPFFNRHPL WLDP VA+KYPKPQPQEPVVLKKKP KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

XP_038882954.1 probable signal peptidase complex subunit 1 [Benincasa hispida]5.1e-3686.02Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQIMLVAFAVV F TGY+MGSF+MMILVYA  V LTTLITVPNWPFFNRHPL WLDP +A+KYPKPQPQEPVVLKKK AKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

TrEMBL top hitse value%identityAlignment
A0A0A0KS09 Uncharacterized protein1.3e-3787.1Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQ+MLVAFAVV F TGYVMGSF++MILVYA  VFLTTLITVPNWPFFNRHPL WLDP +A+KYPKPQPQEPVVLKKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

A0A1S3BET6 probable signal peptidase complex subunit 11.7e-3788.17Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQIMLVAFAVV F TGYVMGSF+MMILVYA  VFLTTLITVPNWPFFNRHPL WLDP +A+KYPKPQPQEPVV KKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

A0A5D3CZV6 Putative signal peptidase complex subunit 11.7e-3788.17Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQIMLVAFAVV F TGYVMGSF+MMILVYA  VFLTTLITVPNWPFFNRHPL WLDP +A+KYPKPQPQEPVV KKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

A0A6J1GX63 probable signal peptidase complex subunit 12.7e-3583.87Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQ+MQIMLVAFAVV F TGYVM SF+MM+LVYA  V LTTLITVPNWPFFNRHPL WLDP VA+KYPKPQPQEPV LKKKP KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

A0A6J1KDF1 probable signal peptidase complex subunit 19.4e-3684.95Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQ+MQIMLVAFAVV F TGYVM SF+MM+LVYA  V LTTLITVPNWPFFNRHPL WLDP VA+KYPKPQPQEPVVLKKKP KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

SwissProt top hitse value%identityAlignment
B0FWK4 Signal peptidase complex subunit 15.0e-1042.5Show/hide
Query:  KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL---DPCVADKYP
        +MD+ GQKLAEQ+ Q +++  A+VGF  GYV   F   + +  A    + L+T+P WP + RHPL WL   D    DK P
Subjt:  KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL---DPCVADKYP

Q3T134 Signal peptidase complex subunit 16.5e-1041.25Show/hide
Query:  KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL---DPCVADKYP
        +MD+ GQKLAEQ+ Q +++  A+VGF  GY+   F   + +  A    + L+T+P WP + RHPL WL   D    DK P
Subjt:  KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL---DPCVADKYP

Q944J0 Probable signal peptidase complex subunit 18.8e-2360.22Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKL EQLMQI+LV   VV    GY   SF+ M+L+YA  V LTTL+TVPNWPF+N HPL WLDP  A+K+PKP+    V  KKK +KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

Q9D958 Signal peptidase complex subunit 18.5e-1044.12Show/hide
Query:  KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL
        +MD+ GQKLAEQ+ Q +++  A+VGF  GYV   F   + +  A    + L+T+P WP + RHPL WL
Subjt:  KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL

Q9Y6A9 Signal peptidase complex subunit 18.5e-1044.12Show/hide
Query:  KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL
        +MD+ GQKLAEQ+ Q +++  A+VGF  GYV   F   + +  A    + L+T+P WP + RHPL WL
Subjt:  KMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL

Arabidopsis top hitse value%identityAlignment
AT2G22425.1 Microsomal signal peptidase 12 kDa subunit (SPC12)6.2e-2460.22Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKL EQLMQI+LV   VV    GY   SF+ M+L+YA  V LTTL+TVPNWPF+N HPL WLDP  A+K+PKP+    V  KKK +KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

AT2G22425.2 Microsomal signal peptidase 12 kDa subunit (SPC12)6.2e-2460.22Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKL EQLMQI+LV   VV    GY   SF+ M+L+YA  V LTTL+TVPNWPF+N HPL WLDP  A+K+PKP+    V  KKK +KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK

AT4G40042.1 Microsomal signal peptidase 12 kDa subunit (SPC12)2.5e-2562.37Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQI+L+  AVV F  GY   SF+MM+L+YA  V LTTLIT+PNWP FNRH L WLDP  A+K+PKPQ       KK  +KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAAGATGGACTGGCTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAGATTATGTTGGTTGCATTTGCCGTTGTGGGCTTTTCGACTGGCTATGTTATGGGATCATT
TCAAATGATGATCTTGGTTTACGCTGCTGCTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAATTGGTTGGATCCTTGTG
TGGCTGATAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTTGAAGAAGAAACCTGCTAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
CTCTCCTTCTCTCAGTTTTCAAATTCCTTCTACTTTCATTTGTATATTTCTAAATCTTTGTTCGCAGCGCCTACGATTTTCATTATACTTGAATCTTCCTAATCTTTCTT
CATTGGGTTGGATCATACGATTTATCTTCTTGTTTTCCATGTTTAAGATGGACTGGCTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAGATTATGTTGGTTGCATTTGCC
GTTGTGGGCTTTTCGACTGGCTATGTTATGGGATCATTTCAAATGATGATCTTGGTTTACGCTGCTGCTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTT
CTTCAATCGCCACCCGCTCAATTGGTTGGATCCTTGTGTGGCTGATAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTTGAAGAAGAAACCTGCTAAGAAGTAGA
TTGAGATAATTGTCCCCCTTTTTTTTTTAATGGAAGAGGAAATATTTCATAAACCAACAACAGGACGAGAGACCACAACCTCAGAAATAACTGAGGAAAATCACCTTGGC
ACAAAAGGAAACTGCCCTCCATCTTCTTTAGAGAGGTCGTCGAATGAGGCTGCTCATCGCCTTGCTCCAGGCGACAATGGAGTTTGAGAATTTTGTGTTTGATTTTGGTT
GTAATGGTTTTTTTTCCCTTGGTTTTCAATGTAGGCTAAAAGAAAACATTTCAATTGATTCTAGAGCATGAAATTAGACTATAGATCCTTTCCTTTTGATTAGTTAATCC
TTACCAATGATGGGATTCATTCTTCTTTTATATATATATATGTGCGCGCGCTTCAC
Protein sequenceShow/hide protein sequence
MFKMDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVADKYPKPQPQEPVVLKKKPAKK