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Lsi02G023390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglutamic acid-rich protein
Genome locationchr02:30010710..30011114
RNA-Seq ExpressionLsi02G023390
SyntenyLsi02G023390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057545.1 glutamic acid-rich protein [Cucumis melo var. makuwa]2.4e-4472.19Show/hide
Query:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPE--GSATSTEFNDAESCTDDTPTVCINEFGIYEGEDE------EEMVENDDD-
        MLST PLFFNF+PHHF HNQGNHIEDISSYFLFEATGDSEAD SVD E   SA++TEFNDAESCTDDTPT+  N     E ED+      EEMVENDDD 
Subjt:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPE--GSATSTEFNDAESCTDDTPTVCINEFGIYEGEDE------EEMVENDDD-

Query:  -------EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS
               EVVESK IGF  KSN SI+STK +FKMLNEVDKNRLFWE CLAS
Subjt:  -------EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS

XP_008451422.1 PREDICTED: glutamic acid-rich protein [Cucumis melo]1.4e-4471.33Show/hide
Query:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPE--GSATSTEFNDAESCTDDTPTVCINEFGIYEGEDE---EEMVENDDD----
        MLST PLFFNF+PHHF HNQGNHIEDISSYFLFEATGDSEAD SVD E   SA++TEFNDAESCTDDTPT+  N     + +D+   EEMVENDDD    
Subjt:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPE--GSATSTEFNDAESCTDDTPTVCINEFGIYEGEDE---EEMVENDDD----

Query:  ------EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS
              EVVESK IGF  KSN SI+STK +FKMLNEVDKNRLFWE CLAS
Subjt:  ------EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS

XP_011659319.1 nuclear polyadenylated RNA-binding protein 3 [Cucumis sativus]5.3e-3970.75Show/hide
Query:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTV--CINEFGIYEGEDEEEM-VENDDD------
        MLS+ PLFFNF+PHHF HNQGNHIEDISSYFLFEATGDSE D       S  STEFNDAESCTDDT  +  C NE    + EDEEEM VENDDD      
Subjt:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTV--CINEFGIYEGEDEEEM-VENDDD------

Query:  ---EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS
           EVVESK IGF  KSN SI+STK EFKMLNEVDKNRLFWE CLAS
Subjt:  ---EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS

XP_022991734.1 uncharacterized protein LOC111488264 [Cucurbita maxima]7.6e-3867.16Show/hide
Query:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTVCINEFGIYEGEDEEEMVENDDDEVVESKPIG
        MLST P FFNFHPH F    GNHIED SS+ LFEATGDSEAD  V    S  S EFNDAESCTDDTP +C NEF  YE +D+++  + ++DE VESKPIG
Subjt:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTVCINEFGIYEGEDEEEMVENDDDEVVESKPIG

Query:  FKTKSNGSIESTKEFKMLNEVDKNRLFWEACLAS
        F T+S+ SI+S +EFKMLNEVDKNRLFWE CLAS
Subjt:  FKTKSNGSIESTKEFKMLNEVDKNRLFWEACLAS

XP_038896353.1 uncharacterized protein LOC120084618 [Benincasa hispida]1.6e-5183.09Show/hide
Query:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTVCINEFG--IYEGEDEEEMVENDDDEVVESKP
        MLST PLFFNF+PH FAH QGNHIEDISSYFL EATGDSE D SVD  GS  STEFNDAESCTDDTPT+C NEFG   YE EDEEEMVEND DEVVESK 
Subjt:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTVCINEFG--IYEGEDEEEMVENDDDEVVESKP

Query:  IGFKTKSNGSIESTKEFKMLNEVDKNRLFWEACLAS
        IGF TKSN SI+STKEFKMLNEVDKNRLFWE CLAS
Subjt:  IGFKTKSNGSIESTKEFKMLNEVDKNRLFWEACLAS

TrEMBL top hitse value%identityAlignment
A0A0A0K519 Uncharacterized protein2.6e-3970.75Show/hide
Query:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTV--CINEFGIYEGEDEEEM-VENDDD------
        MLS+ PLFFNF+PHHF HNQGNHIEDISSYFLFEATGDSE D       S  STEFNDAESCTDDT  +  C NE    + EDEEEM VENDDD      
Subjt:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTV--CINEFGIYEGEDEEEM-VENDDD------

Query:  ---EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS
           EVVESK IGF  KSN SI+STK EFKMLNEVDKNRLFWE CLAS
Subjt:  ---EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS

A0A1S3BRI2 glutamic acid-rich protein6.9e-4571.33Show/hide
Query:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPE--GSATSTEFNDAESCTDDTPTVCINEFGIYEGEDE---EEMVENDDD----
        MLST PLFFNF+PHHF HNQGNHIEDISSYFLFEATGDSEAD SVD E   SA++TEFNDAESCTDDTPT+  N     + +D+   EEMVENDDD    
Subjt:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPE--GSATSTEFNDAESCTDDTPTVCINEFGIYEGEDE---EEMVENDDD----

Query:  ------EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS
              EVVESK IGF  KSN SI+STK +FKMLNEVDKNRLFWE CLAS
Subjt:  ------EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS

A0A5A7UVG0 Glutamic acid-rich protein1.2e-4472.19Show/hide
Query:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPE--GSATSTEFNDAESCTDDTPTVCINEFGIYEGEDE------EEMVENDDD-
        MLST PLFFNF+PHHF HNQGNHIEDISSYFLFEATGDSEAD SVD E   SA++TEFNDAESCTDDTPT+  N     E ED+      EEMVENDDD 
Subjt:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPE--GSATSTEFNDAESCTDDTPTVCINEFGIYEGEDE------EEMVENDDD-

Query:  -------EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS
               EVVESK IGF  KSN SI+STK +FKMLNEVDKNRLFWE CLAS
Subjt:  -------EVVESKPIGFKTKSNGSIESTK-EFKMLNEVDKNRLFWEACLAS

A0A6J1GRH1 uncharacterized protein LOC1114563671.1e-3161.19Show/hide
Query:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTVCINEFGIYEGEDEEEMVENDDDEVVESKPIG
        MLST P FFNFHPH +    G HIED SS  LFEATGDSEAD  V    S  S EFNDAESCTD+TP +  N+   YE +D++   +++++E VESKPIG
Subjt:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTVCINEFGIYEGEDEEEMVENDDDEVVESKPIG

Query:  FKTKSNGSIESTKEFKMLNEVDKNRLFWEACLAS
        F T+S+ SI+S +EFKMLNEV+KNRLFWE CLAS
Subjt:  FKTKSNGSIESTKEFKMLNEVDKNRLFWEACLAS

A0A6J1JVN0 uncharacterized protein LOC1114882643.7e-3867.16Show/hide
Query:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTVCINEFGIYEGEDEEEMVENDDDEVVESKPIG
        MLST P FFNFHPH F    GNHIED SS+ LFEATGDSEAD  V    S  S EFNDAESCTDDTP +C NEF  YE +D+++  + ++DE VESKPIG
Subjt:  MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTVCINEFGIYEGEDEEEMVENDDDEVVESKPIG

Query:  FKTKSNGSIESTKEFKMLNEVDKNRLFWEACLAS
        F T+S+ SI+S +EFKMLNEVDKNRLFWE CLAS
Subjt:  FKTKSNGSIESTKEFKMLNEVDKNRLFWEACLAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47950.1 unknown protein2.4e-0530Show/hide
Query:  NQGNHIEDISSYFLFEATGDSEA-DPSVDPEGSATSTEFNDAESCTDDTPTVCINEFGIYEGED--------EEEMVENDDDEVVESK-----PIGFKTK
        N  N++ D+S + L EA+ DSEA   SVD +      +     S      T C+++     G D        EE    +++DE  E +       G   +
Subjt:  NQGNHIEDISSYFLFEATGDSEA-DPSVDPEGSATSTEFNDAESCTDDTPTVCINEFGIYEGED--------EEEMVENDDDEVVESK-----PIGFKTK

Query:  SNGSIESTKEFKMLNEVDKNRLFWEACLAS
         N +++S     +++E+D+NR+FWEACLAS
Subjt:  SNGSIESTKEFKMLNEVDKNRLFWEACLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCAACTCCTCCTCTCTTCTTCAACTTCCATCCTCACCATTTTGCTCATAACCAAGGCAACCACATTGAAGATATTTCCTCTTACTTTCTCTTCGAGGCCACCGG
CGACTCAGAGGCTGACCCCTCGGTCGACCCCGAGGGCTCGGCCACCTCGACGGAGTTCAACGACGCCGAATCTTGCACCGATGACACTCCTACTGTATGTATTAATGAAT
TTGGAATATATGAAGGTGAAGATGAAGAGGAGATGGTTGAGAATGATGATGATGAGGTTGTTGAAAGCAAGCCAATTGGATTCAAAACAAAGTCAAATGGCTCTATCGAG
TCAACTAAGGAGTTCAAAATGTTGAATGAGGTGGACAAAAACAGGTTGTTTTGGGAGGCTTGTTTGGCTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCAACTCCTCCTCTCTTCTTCAACTTCCATCCTCACCATTTTGCTCATAACCAAGGCAACCACATTGAAGATATTTCCTCTTACTTTCTCTTCGAGGCCACCGG
CGACTCAGAGGCTGACCCCTCGGTCGACCCCGAGGGCTCGGCCACCTCGACGGAGTTCAACGACGCCGAATCTTGCACCGATGACACTCCTACTGTATGTATTAATGAAT
TTGGAATATATGAAGGTGAAGATGAAGAGGAGATGGTTGAGAATGATGATGATGAGGTTGTTGAAAGCAAGCCAATTGGATTCAAAACAAAGTCAAATGGCTCTATCGAG
TCAACTAAGGAGTTCAAAATGTTGAATGAGGTGGACAAAAACAGGTTGTTTTGGGAGGCTTGTTTGGCTTCATAG
Protein sequenceShow/hide protein sequence
MLSTPPLFFNFHPHHFAHNQGNHIEDISSYFLFEATGDSEADPSVDPEGSATSTEFNDAESCTDDTPTVCINEFGIYEGEDEEEMVENDDDEVVESKPIGFKTKSNGSIE
STKEFKMLNEVDKNRLFWEACLAS