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Lsi02G023560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationchr02:30224650..30227343
RNA-Seq ExpressionLsi02G023560
SyntenyLsi02G023560
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]1.8e-1564.21Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE
        MA+IR L+SIALLALLF FSESL TS+SLTGIP RNI  T AH I N SVESS QRKS+    + RRRIRP+ I  S   H KS   RSR AS+E
Subjt:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]3.2e-0447.06Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIG---SSHRKSEAKRSRGA
        MA+I+SLL I+LLALLF FSESL T        SNS+TG+ RRN+ QTA H I +S  + +   K          RIRPV+ G   + +RKS A RS+ A
Subjt:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIG---SSHRKSEAKRSRGA

Query:  SY
        S+
Subjt:  SY

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]5.6e-0953.06Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSSHRKSEAKRSRGAS
        MA+++SL+S+ALLALL +FSESL          SNSLTG+ RRN+ QTAAH I ++SVESS +RK     +  +RR+RPV+ G+  R S A RSR AS
Subjt:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSSHRKSEAKRSRGAS

XP_008451651.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]1.8e-1564.21Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE
        MA+IR L+SIALLALLF FSESL TS+SLTGIP RNI  T AH I N SVESS QRKS+    + RRRIRP+ I  S   H KS   RSR AS+E
Subjt:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE

TrEMBL top hitse value%identityAlignment
A0A0A0K929 Uncharacterized protein5.1e-0856.52Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQ--RKSSNFRIE--ARRRIRPVSIGSS---HRKSEAKR
        MA+IR LLSIA LA LF FSESL TS+SLTGIP R I  TAAH I + SVE SS   RKS+   I+   +RR  P+ + SS   H KS A R
Subjt:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQ--RKSSNFRIE--ARRRIRPVSIGSS---HRKSEAKR

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like8.7e-1664.21Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE
        MA+IR L+SIALLALLF FSESL TS+SLTGIP RNI  T AH I N SVESS QRKS+    + RRRIRP+ I  S   H KS   RSR AS+E
Subjt:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE

A0A5A7VLE5 Protein no-on-transient A-like1.5e-0447.06Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIG---SSHRKSEAKRSRGA
        MA+I+SLL I+LLALLF FSESL T        SNS+TG+ RRN+ QTA H I +S  + +   K          RIRPV+ G   + +RKS A RS+ A
Subjt:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIG---SSHRKSEAKRSRGA

Query:  SY
        S+
Subjt:  SY

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like8.7e-1664.21Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE
        MA+IR L+SIALLALLF FSESL TS+SLTGIP RNI  T AH I N SVESS QRKS+    + RRRIRP+ I  S   H KS   RSR AS+E
Subjt:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCAGATCCCTACTTTCCATAGCTCTCTTGGCTCTTCTCTTCATCTTCTCCGAATCACTACCCACTTCCAATTCTCTCACCGGAATTCCTCGCCGGAACAT
CTTTCAGACGGCAGCTCATGGGATTACAAATAGCAGTGTTGAGTCCTCTTCCCAAAGGAAGTCGAGTAATTTCCGTATCGAAGCTAGAAGGCGGATTCGACCTGTAAGTA
TCGGCAGCAGCCACCGTAAATCAGAGGCGAAACGGAGCCGAGGAGCATCCTATGAGCCGCTCACTGAGGGCTTTGATTTGGCTTGGCGACTGCCTGACAATGACCGATCG
AGTGACAGTATTGGAGCCGGAAGTGGAAGAATGGTGGAGAGGGAGGGGAGGAGAGGGGATCAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
TAACAATAATCATAACAAAAGATAAGGTAAGAAAAATGGTTGGTGGATGACAAGATGAGATTTCAATAAAATAATAATAAGAATATACCTAATAATAATATCAAAATCAA
ATGGGCAGCCAAAAACTAAATTATTTCAATCCATCTTCCAAATGGCTTCCATCAGATCCCTACTTTCCATAGCTCTCTTGGCTCTTCTCTTCATCTTCTCCGAATCACTA
CCCACTTCCAATTCTCTCACCGGAATTCCTCGCCGGAACATCTTTCAGACGGCAGCTCATGGGATTACAAATAGCAGTGTTGAGTCCTCTTCCCAAAGGAAGTCGAGTAA
TTTCCGTATCGAAGCTAGAAGGCGGATTCGACCTGTAAGTATCGGCAGCAGCCACCGTAAATCAGAGGCGAAACGGAGCCGAGGAGCATCCTATGAGCCGCTCACTGAGG
GCTTTGATTTGGCTTGGCGACTGCCTGACAATGACCGATCGAGTGACAGTATTGGAGCCGGAAGTGGAAGAATGGTGGAGAGGGAGGGGAGGAGAGGGGATCAAAAGTGA
Protein sequenceShow/hide protein sequence
MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSSHRKSEAKRSRGASYEPLTEGFDLAWRLPDNDRS
SDSIGAGSGRMVEREGRRGDQK