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Lsi02G023570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023570
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein no-on-transient A-like
Genome locationchr02:30236979..30237323
RNA-Seq ExpressionLsi02G023570
SyntenyLsi02G023570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]1.7e-1453.78Show/hide
Query:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTN-VHIKKARGGRIRPI-VTGTGTGNRKSAANRSRV
        MA I+ L+SIALLALLFFSESL T        S+SLTG+  RN+L T AH I + +VESS +RK+N +H K  R  RIRPI ++G+   + KSA NRSRV
Subjt:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTN-VHIKKARGGRIRPI-VTGTGTGNRKSAANRSRV

Query:  ASYGVGFLL---FFLGFFM
        AS+ VG +L    FLG F+
Subjt:  ASYGVGFLL---FFLGFFM

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]6.5e-3071.3Show/hide
Query:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTG-TGNRKSAANRSRVA
        MA IKSL+ I+LLALLFFSESL+TSAAD  GASNS+TGM+RRNVLQTA HEIAD      SE K NVHIK+  GGRIRP+  GTG TGNRKSAA+RS+VA
Subjt:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTG-TGNRKSAANRSRVA

Query:  SYGVGFLLFFLGFFM
        S+G+GFLLFF   F+
Subjt:  SYGVGFLLFFLGFFM

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2767.54Show/hide
Query:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTGTGNRKSAANRSRVAS
        MA +KSL+S+ALLALL FSESL  SA D  G SNSLTGM+RRNVLQTAAH+IADN+VESS ERK NVHIK+    R+RP+ TGT    R SAANRSR+AS
Subjt:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTGTGNRKSAANRSRVAS

Query:  YGVGFLLFFLGFFM
         GVG +L  LG F+
Subjt:  YGVGFLLFFLGFFM

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]7.9e-2869.3Show/hide
Query:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTGTGNRKSAANRSRVAS
        MA IKSLISI+LLALLFFSESL+TSAA+  GASNS+T M+RRN+LQTA HEIAD      SE K NV IKK   GR RPI  GTGTG R SAANRSRV S
Subjt:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTGTGNRKSAANRSRVAS

Query:  YGVGFLLFFLGFFM
        +G+GFLLFF G  +
Subjt:  YGVGFLLFFLGFFM

XP_008451666.1 PREDICTED: protein no-on-transient A-like [Cucumis melo]1.1e-1651.41Show/hide
Query:  MADIKSLISIALLALLFFSESLATSAADHDGA-SNSLTGMIRRNVLQTAAHEIADNNVESSSERK-TNVHIK----------------KARGGR------
        MA IK+ I I+LLALLFF E L        GA SNS+TG++ R +LQTAAH+ A +NVESSSERK  NVH+K                  RGGR      
Subjt:  MADIKSLISIALLALLFFSESLATSAADHDGA-SNSLTGMIRRNVLQTAAHEIADNNVESSSERK-TNVHIK----------------KARGGR------

Query:  ----IRPIVTGTGTGNRKSAANRSRVASYGVGFLLFFLGFFM
             R  + G GTG+ KSAANRS VAS+GVGFLLF LG FM
Subjt:  ----IRPIVTGTGTGNRKSAANRSRVASYGVGFLLFFLGFFM

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ7 Uncharacterized protein3.8e-2869.3Show/hide
Query:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTGTGNRKSAANRSRVAS
        MA IKSLISI+LLALLFFSESL+TSAA+  GASNS+T M+RRN+LQTA HEIAD      SE K NV IKK   GR RPI  GTGTG R SAANRSRV S
Subjt:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTGTGNRKSAANRSRVAS

Query:  YGVGFLLFFLGFFM
        +G+GFLLFF G  +
Subjt:  YGVGFLLFFLGFFM

A0A1S3BRF6 protein no-on-transient A-like5.2e-1751.41Show/hide
Query:  MADIKSLISIALLALLFFSESLATSAADHDGA-SNSLTGMIRRNVLQTAAHEIADNNVESSSERK-TNVHIK----------------KARGGR------
        MA IK+ I I+LLALLFF E L        GA SNS+TG++ R +LQTAAH+ A +NVESSSERK  NVH+K                  RGGR      
Subjt:  MADIKSLISIALLALLFFSESLATSAADHDGA-SNSLTGMIRRNVLQTAAHEIADNNVESSSERK-TNVHIK----------------KARGGR------

Query:  ----IRPIVTGTGTGNRKSAANRSRVASYGVGFLLFFLGFFM
             R  + G GTG+ KSAANRS VAS+GVGFLLF LG FM
Subjt:  ----IRPIVTGTGTGNRKSAANRSRVASYGVGFLLFFLGFFM

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like4.6e-1355.34Show/hide
Query:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTN-VHIKKARGGRIRPI-VTGTGTGNRKSAANRSRV
        MA I+ L+SIALLALLFFSESL T        S+SLTG+  RN+L T AH I + +VESS +RK+N +H K  R  RIRPI ++G+   + KSA NRSRV
Subjt:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTN-VHIKKARGGRIRPI-VTGTGTGNRKSAANRSRV

Query:  ASY
        AS+
Subjt:  ASY

A0A5A7VLE5 Protein no-on-transient A-like3.1e-3071.3Show/hide
Query:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTG-TGNRKSAANRSRVA
        MA IKSL+ I+LLALLFFSESL+TSAAD  GASNS+TGM+RRNVLQTA HEIAD      SE K NVHIK+  GGRIRP+  GTG TGNRKSAA+RS+VA
Subjt:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTG-TGNRKSAANRSRVA

Query:  SYGVGFLLFFLGFFM
        S+G+GFLLFF   F+
Subjt:  SYGVGFLLFFLGFFM

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like8.3e-1553.78Show/hide
Query:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTN-VHIKKARGGRIRPI-VTGTGTGNRKSAANRSRV
        MA I+ L+SIALLALLFFSESL T        S+SLTG+  RN+L T AH I + +VESS +RK+N +H K  R  RIRPI ++G+   + KSA NRSRV
Subjt:  MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTN-VHIKKARGGRIRPI-VTGTGTGNRKSAANRSRV

Query:  ASYGVGFLL---FFLGFFM
        AS+ VG +L    FLG F+
Subjt:  ASYGVGFLL---FFLGFFM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACATCAAATCCCTAATTTCCATAGCTCTTCTCGCCCTTCTCTTCTTTTCCGAATCCCTAGCCACTTCTGCCGCCGATCACGACGGCGCTTCCAATTCTCTAAC
CGGAATGATCCGCCGGAACGTCCTTCAGACGGCGGCTCATGAAATTGCAGATAACAATGTCGAGTCCTCTTCCGAACGAAAGACGAATGTTCATATCAAAAAAGCTAGAG
GGGGGCGGATTCGACCTATAGTGACTGGCACTGGCACTGGCAACCGTAAATCGGCGGCGAATCGGAGCCGAGTCGCTTCATATGGCGTTGGATTTCTGCTCTTCTTTTTG
GGATTTTTCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGACATCAAATCCCTAATTTCCATAGCTCTTCTCGCCCTTCTCTTCTTTTCCGAATCCCTAGCCACTTCTGCCGCCGATCACGACGGCGCTTCCAATTCTCTAAC
CGGAATGATCCGCCGGAACGTCCTTCAGACGGCGGCTCATGAAATTGCAGATAACAATGTCGAGTCCTCTTCCGAACGAAAGACGAATGTTCATATCAAAAAAGCTAGAG
GGGGGCGGATTCGACCTATAGTGACTGGCACTGGCACTGGCAACCGTAAATCGGCGGCGAATCGGAGCCGAGTCGCTTCATATGGCGTTGGATTTCTGCTCTTCTTTTTG
GGATTTTTCATGTGA
Protein sequenceShow/hide protein sequence
MADIKSLISIALLALLFFSESLATSAADHDGASNSLTGMIRRNVLQTAAHEIADNNVESSSERKTNVHIKKARGGRIRPIVTGTGTGNRKSAANRSRVASYGVGFLLFFL
GFFM