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Lsi02G023580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein no-on-transient A-like
Genome locationchr02:30241250..30241591
RNA-Seq ExpressionLsi02G023580
SyntenyLsi02G023580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]1.4e-1655.56Show/hide
Query:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARVRMRP-LVTGTGPGTHTSAANRSRVAS
        MAAI+ L+SIALLALLFFSESLL        TS++LTG+ HRNIL + AH+I + +V+SS +RK N    K R R+RP L++G+    H SA NRSRVAS
Subjt:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARVRMRP-LVTGTGPGTHTSAANRSRVAS

Query:  FGIGFLL---IFLGLFM
        F +G +L   IFLGLF+
Subjt:  FGIGFLL---IFLGLFM

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]6.5e-2262.61Show/hide
Query:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKK-ARVRMRPLVTGTG-PGTHTSAANRSRVA
        MAAIKSL+ I+LLALLFFSESL TSAA+  G SN++TGML RN+LQ+A H+IAD      SE KMNVHIK+    R+RP+  GTG  G   SAA+RS+VA
Subjt:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKK-ARVRMRPLVTGTG-PGTHTSAANRSRVA

Query:  SFGIGFLLIFLGLFM
        SFG+GFLL F  LF+
Subjt:  SFGIGFLLIFLGLFM

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2867.26Show/hide
Query:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARVRMRPLVTGTGPGTHTSAANRSRVASF
        MAA+KSL+S+ALLALL FSESL  SA +R G SN+LTGML RN+LQ+AAHQIADN+V+SS ERKMNVHIK+   RMRP+ T    GT +SAANRSR+AS 
Subjt:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARVRMRPLVTGTGPGTHTSAANRSRVASF

Query:  GIGFLLIFLGLFM
        G+G +L+ LGLF+
Subjt:  GIGFLLIFLGLFM

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]2.8e-2567.54Show/hide
Query:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARV-RMRPLVTGTGPGTHTSAANRSRVAS
        MAAIKSLISI+LLALLFFSESL TSAAN  G SN++T ML RNILQ+A H+IAD      SE KMNV IKK  + R RP+  GTG GT +SAANRSRV S
Subjt:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARV-RMRPLVTGTGPGTHTSAANRSRVAS

Query:  FGIGFLLIFLGLFM
        FG+GFLL F GL +
Subjt:  FGIGFLLIFLGLFM

XP_008451666.1 PREDICTED: protein no-on-transient A-like [Cucumis melo]4.8e-1750Show/hide
Query:  MAAIKSLISIALLALLFFSESLL-TSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKM-NVHIK---------------------------K
        MAAIK+ I I+LLALLFF E L       RG  SN++TG+LHR ILQ+AAH+ A +NV+SSSERKM NVH+K                           +
Subjt:  MAAIKSLISIALLALLFFSESLL-TSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKM-NVHIK---------------------------K

Query:  ARVRMRPLVTGTGPGTHTSAANRSRVASFGIGFLLIFLGLFM
         R   R  + G G G H SAANRS VASFG+GFLL  LGLFM
Subjt:  ARVRMRPLVTGTGPGTHTSAANRSRVASFGIGFLLIFLGLFM

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ7 Uncharacterized protein1.4e-2567.54Show/hide
Query:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARV-RMRPLVTGTGPGTHTSAANRSRVAS
        MAAIKSLISI+LLALLFFSESL TSAAN  G SN++T ML RNILQ+A H+IAD      SE KMNV IKK  + R RP+  GTG GT +SAANRSRV S
Subjt:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARV-RMRPLVTGTGPGTHTSAANRSRVAS

Query:  FGIGFLLIFLGLFM
        FG+GFLL F GL +
Subjt:  FGIGFLLIFLGLFM

A0A1S3BRF6 protein no-on-transient A-like2.3e-1750Show/hide
Query:  MAAIKSLISIALLALLFFSESLL-TSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKM-NVHIK---------------------------K
        MAAIK+ I I+LLALLFF E L       RG  SN++TG+LHR ILQ+AAH+ A +NV+SSSERKM NVH+K                           +
Subjt:  MAAIKSLISIALLALLFFSESLL-TSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKM-NVHIK---------------------------K

Query:  ARVRMRPLVTGTGPGTHTSAANRSRVASFGIGFLLIFLGLFM
         R   R  + G G G H SAANRS VASFG+GFLL  LGLFM
Subjt:  ARVRMRPLVTGTGPGTHTSAANRSRVASFGIGFLLIFLGLFM

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like2.4e-1456.44Show/hide
Query:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARVRMRP-LVTGTGPGTHTSAANRSRVAS
        MAAI+ L+SIALLALLFFSESLL        TS++LTG+ HRNIL + AH+I + +V+SS +RK N    K R R+RP L++G+    H SA NRSRVAS
Subjt:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARVRMRP-LVTGTGPGTHTSAANRSRVAS

Query:  F
        F
Subjt:  F

A0A5A7VLE5 Protein no-on-transient A-like3.1e-2262.61Show/hide
Query:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKK-ARVRMRPLVTGTG-PGTHTSAANRSRVA
        MAAIKSL+ I+LLALLFFSESL TSAA+  G SN++TGML RN+LQ+A H+IAD      SE KMNVHIK+    R+RP+  GTG  G   SAA+RS+VA
Subjt:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKK-ARVRMRPLVTGTG-PGTHTSAANRSRVA

Query:  SFGIGFLLIFLGLFM
        SFG+GFLL F  LF+
Subjt:  SFGIGFLLIFLGLFM

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like6.7e-1755.56Show/hide
Query:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARVRMRP-LVTGTGPGTHTSAANRSRVAS
        MAAI+ L+SIALLALLFFSESLL        TS++LTG+ HRNIL + AH+I + +V+SS +RK N    K R R+RP L++G+    H SA NRSRVAS
Subjt:  MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARVRMRP-LVTGTGPGTHTSAANRSRVAS

Query:  FGIGFLL---IFLGLFM
        F +G +L   IFLGLF+
Subjt:  FGIGFLL---IFLGLFM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCATCAAATCCCTAATTTCCATAGCTCTTCTCGCCCTTCTCTTCTTCTCCGAATCCCTACTCACTTCTGCTGCCAATCGCGGCGGCACTTCCAATGCTCTTAC
CGGAATGCTCCATCGGAACATCCTTCAGTCGGCGGCTCATCAAATTGCAGATAACAATGTCGATTCCTCTTCCGAACGAAAGATGAATGTTCATATCAAAAAAGCCAGAG
TGCGGATGCGACCTTTAGTGACTGGCACTGGCCCTGGCACCCATACATCGGCGGCGAATCGGAGCCGAGTCGCTTCTTTTGGCATTGGATTTCTGCTAATTTTTTTGGGA
TTGTTCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCATCAAATCCCTAATTTCCATAGCTCTTCTCGCCCTTCTCTTCTTCTCCGAATCCCTACTCACTTCTGCTGCCAATCGCGGCGGCACTTCCAATGCTCTTAC
CGGAATGCTCCATCGGAACATCCTTCAGTCGGCGGCTCATCAAATTGCAGATAACAATGTCGATTCCTCTTCCGAACGAAAGATGAATGTTCATATCAAAAAAGCCAGAG
TGCGGATGCGACCTTTAGTGACTGGCACTGGCCCTGGCACCCATACATCGGCGGCGAATCGGAGCCGAGTCGCTTCTTTTGGCATTGGATTTCTGCTAATTTTTTTGGGA
TTGTTCATGTGA
Protein sequenceShow/hide protein sequence
MAAIKSLISIALLALLFFSESLLTSAANRGGTSNALTGMLHRNILQSAAHQIADNNVDSSSERKMNVHIKKARVRMRPLVTGTGPGTHTSAANRSRVASFGIGFLLIFLG
LFM