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Lsi02G023590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein no-on-transient A-like
Genome locationchr02:30244543..30244923
RNA-Seq ExpressionLsi02G023590
SyntenyLsi02G023590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]3.8e-2360.63Show/hide
Query:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNR-SG
        MAAIKSL+FI LLALLFFSE L+TSAA   GASNS+TGMLRRN+LQT  H+IAD      SE KMNVHIK+G GG            R RPV  G   +G
Subjt:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNR-SG

Query:  GRTSSANRSRVASFGVGFLLIFLGLFM
         R S+A+RS+VASFG+GFLL F  LF+
Subjt:  GRTSSANRSRVASFGVGFLLIFLGLFM

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2460.32Show/hide
Query:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRSGG
        MAA+KSL+ + LLALL FSE L  SA  R G SNSLTGMLRRN+LQT AHQIADN+VESS ERKMNVHIK+                R RPV  G RS  
Subjt:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRSGG

Query:  RTSSANRSRVASFGVGFLLIFLGLFM
          S+ANRSR+AS GVG +L+ LGLF+
Subjt:  RTSSANRSRVASFGVGFLLIFLGLFM

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1249.62Show/hide
Query:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPA--HQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRS
        MAAIK+L+ I L+ALL F E L TSAAV  GAS SL G+LRRNI+QT A  HQ+A        E+K NVHIK+                R RPV IG   
Subjt:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPA--HQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRS

Query:  GGRTSSANRSRVASFGVGFLL---IFLGLFM
          +TS+ANRSR A  GVG +L   + LGLF+
Subjt:  GGRTSSANRSRVASFGVGFLL---IFLGLFM

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]4.2e-2260.32Show/hide
Query:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRSGG
        MAAIKSLI I LLALLFFSE L+TSAA   GASNS+T MLRRNILQT  H+IAD      SE KMNV IKKG  G            R RP+  G  +G 
Subjt:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRSGG

Query:  RTSSANRSRVASFGVGFLLIFLGLFM
        R+S+ANRSRV SFG+GFLL F GL +
Subjt:  RTSSANRSRVASFGVGFLLIFLGLFM

XP_008451666.1 PREDICTED: protein no-on-transient A-like [Cucumis melo]1.1e-1955.63Show/hide
Query:  MAAIKSLIFIPLLALLFFSEYL-ATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKM-NVHIK----------KGAGGGGRSSSTRTSPTR
        MAAIK+ IFI LLALLFF EYL      VR   SNS+TG+L R ILQT AH+ A +NVESSSERKM NVH+K          +G GGGG          R
Subjt:  MAAIKSLIFIPLLALLFFSEYL-ATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKM-NVHIK----------KGAGGGGRSSSTRTSPTR

Query:  TRPVWIGNRSGGRT----SSANRSRVASFGVGFLLIFLGLFM
         R     N  GG T    S+ANRS VASFGVGFLL  LGLFM
Subjt:  TRPVWIGNRSGGRT----SSANRSRVASFGVGFLLIFLGLFM

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ7 Uncharacterized protein2.0e-2260.32Show/hide
Query:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRSGG
        MAAIKSLI I LLALLFFSE L+TSAA   GASNS+T MLRRNILQT  H+IAD      SE KMNV IKKG  G            R RP+  G  +G 
Subjt:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRSGG

Query:  RTSSANRSRVASFGVGFLLIFLGLFM
        R+S+ANRSRV SFG+GFLL F GL +
Subjt:  RTSSANRSRVASFGVGFLLIFLGLFM

A0A1S3BRF6 protein no-on-transient A-like5.6e-2055.63Show/hide
Query:  MAAIKSLIFIPLLALLFFSEYL-ATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKM-NVHIK----------KGAGGGGRSSSTRTSPTR
        MAAIK+ IFI LLALLFF EYL      VR   SNS+TG+L R ILQT AH+ A +NVESSSERKM NVH+K          +G GGGG          R
Subjt:  MAAIKSLIFIPLLALLFFSEYL-ATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKM-NVHIK----------KGAGGGGRSSSTRTSPTR

Query:  TRPVWIGNRSGGRT----SSANRSRVASFGVGFLLIFLGLFM
         R     N  GG T    S+ANRS VASFGVGFLL  LGLFM
Subjt:  TRPVWIGNRSGGRT----SSANRSRVASFGVGFLLIFLGLFM

A0A5A7VLE5 Protein no-on-transient A-like1.8e-2360.63Show/hide
Query:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNR-SG
        MAAIKSL+FI LLALLFFSE L+TSAA   GASNS+TGMLRRN+LQT  H+IAD      SE KMNVHIK+G GG            R RPV  G   +G
Subjt:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNR-SG

Query:  GRTSSANRSRVASFGVGFLLIFLGLFM
         R S+A+RS+VASFG+GFLL F  LF+
Subjt:  GRTSSANRSRVASFGVGFLLIFLGLFM

A0A5A7VN87 Protein no-on-transient A-like6.2e-1166.67Show/hide
Query:  MAAIKSLIFIPLLALLFFSEYL-ATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKM-NVHIK
        MAAIK+ IFI LLALLFF EYL      VR   SNS+TG+L R ILQT AH+ A +NVESSSERKM NVH+K
Subjt:  MAAIKSLIFIPLLALLFFSEYL-ATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKM-NVHIK

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like8.1e-1148.09Show/hide
Query:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMN-VHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRSG
        MAAI+ L+ I LLALLFFSE L T        S+SLTG+  RNIL T AH+I + +VESS +RK N +H K                 R RP+ I   +G
Subjt:  MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMN-VHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRSG

Query:  GRTSSA-NRSRVASFGVGFLL---IFLGLFM
            SA NRSRVASF VG +L   IFLGLF+
Subjt:  GRTSSA-NRSRVASFGVGFLL---IFLGLFM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCATCAAATCCCTAATTTTCATACCTCTTCTCGCCCTTCTCTTCTTCTCCGAATACCTAGCCACTTCTGCCGCCGTTCGCGACGGCGCTTCCAATTCTCTTAC
CGGAATGCTCCGCCGGAACATCCTTCAGACGCCGGCTCATCAAATTGCAGATAACAATGTCGAGTCCTCTTCCGAACGGAAGATGAACGTTCATATCAAAAAAGGTGCAG
GAGGCGGCGGCCGTTCATCGTCGACGCGTACATCGCCGACGCGGACGCGACCTGTATGGATTGGCAATCGCTCTGGCGGCCGTACATCGTCGGCGAATCGGAGCCGAGTC
GCGTCCTTTGGCGTTGGATTTCTGCTCATTTTTTTGGGACTGTTCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCATCAAATCCCTAATTTTCATACCTCTTCTCGCCCTTCTCTTCTTCTCCGAATACCTAGCCACTTCTGCCGCCGTTCGCGACGGCGCTTCCAATTCTCTTAC
CGGAATGCTCCGCCGGAACATCCTTCAGACGCCGGCTCATCAAATTGCAGATAACAATGTCGAGTCCTCTTCCGAACGGAAGATGAACGTTCATATCAAAAAAGGTGCAG
GAGGCGGCGGCCGTTCATCGTCGACGCGTACATCGCCGACGCGGACGCGACCTGTATGGATTGGCAATCGCTCTGGCGGCCGTACATCGTCGGCGAATCGGAGCCGAGTC
GCGTCCTTTGGCGTTGGATTTCTGCTCATTTTTTTGGGACTGTTCATGTGA
Protein sequenceShow/hide protein sequence
MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRSGGRTSSANRSRV
ASFGVGFLLIFLGLFM