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Lsi02G023600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:30253204..30253668
RNA-Seq ExpressionLsi02G023600
SyntenyLsi02G023600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575858.1 hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1964.71Show/hide
Query:  IKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMF-----SMVDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLC
        IKS ISI LL LLLLS  L I AADHGV A + L  +F        + HQV EN  GYQYSFEQKIRRRARR+++RAEGPSPS AN SRTS F I S LC
Subjt:  IKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMF-----SMVDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLC

Query:  LC
        LC
Subjt:  LC

KGN45443.2 hypothetical protein Csa_016459 [Cucumis sativus]1.5e-1665.79Show/hide
Query:  AHNSLVKMFSMVDHHQVVENENGYQYSFEQKI-RRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLCLCIIFGLFI
        A NS + MF M ++ QVVEN+NGY+YSFEQKI ++RARRS K AEGPSPSMAN+SR + FDI+S LC+CI+FGL +
Subjt:  AHNSLVKMFSMVDHHQVVENENGYQYSFEQKI-RRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLCLCIIFGLFI

XP_022954099.1 uncharacterized protein LOC111456466 [Cucurbita moschata]2.0e-2162.39Show/hide
Query:  IKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMF-----SMVDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLC
        IKS ISI LL LLLLS  L I AADHGV A + L ++F        + HQV EN  GYQYSFEQKIRRRARR+++RAEGPSPS AN S+TS F + S LC
Subjt:  IKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMF-----SMVDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLC

Query:  LCIIFGLFI
        LC +FGLF+
Subjt:  LCIIFGLFI

XP_022992473.1 uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima]6.5e-2061.47Show/hide
Query:  IKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMFSM-----VDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLC
        IKS ISI LL LLLL   L I AADHGV A + L  +F +      + HQV EN  G QYSFEQKIRRRARR+++RAEGPSPS AN SRTS F + S LC
Subjt:  IKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMFSM-----VDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLC

Query:  LCIIFGLFI
        LC +FGLF+
Subjt:  LCIIFGLFI

TrEMBL top hitse value%identityAlignment
A0A0A0K934 Uncharacterized protein1.1e-1763.16Show/hide
Query:  MPPIIKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMFSMVDHHQVVENENGYQYSFEQKI-RRRARRSIKRAEGPSPSMANQSRTSLFDI
        MPP IKS IS+ LL LLLLSR  S  A +H + A NS + MF M ++ QVVEN+NGY+YSFEQKI ++RARRS K AEGPSPSMAN+SR + F I
Subjt:  MPPIIKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMFSMVDHHQVVENENGYQYSFEQKI-RRRARRSIKRAEGPSPSMANQSRTSLFDI

A0A6J1GRX2 uncharacterized protein LOC1114564669.7e-2262.39Show/hide
Query:  IKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMF-----SMVDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLC
        IKS ISI LL LLLLS  L I AADHGV A + L ++F        + HQV EN  GYQYSFEQKIRRRARR+++RAEGPSPS AN S+TS F + S LC
Subjt:  IKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMF-----SMVDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLC

Query:  LCIIFGLFI
        LC +FGLF+
Subjt:  LCIIFGLFI

A0A6J1JZB1 uncharacterized protein LOC111488793 isoform X13.1e-2061.47Show/hide
Query:  IKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMFSM-----VDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLC
        IKS ISI LL LLLL   L I AADHGV A + L  +F +      + HQV EN  G QYSFEQKIRRRARR+++RAEGPSPS AN SRTS F + S LC
Subjt:  IKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMFSM-----VDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLC

Query:  LCIIFGLFI
        LC +FGLF+
Subjt:  LCIIFGLFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCAATTATCAAATCTTCAATCTCCATAACTCTTCTAGTTCTTCTGTTGCTCTCTCGATCCCTATCAATTTTCGCCGCCGATCACGGCGTAACAGCTCATAATTC
TCTAGTCAAAATGTTTTCGATGGTAGACCATCATCAAGTTGTAGAGAATGAGAATGGATATCAATACTCTTTTGAGCAAAAAATCAGAAGGCGAGCTCGACGATCCATTA
AGAGAGCTGAAGGTCCAAGTCCATCAATGGCGAATCAGAGTCGAACGTCGTTGTTTGACATTAGGTCTTCGTTGTGTCTGTGTATTATTTTTGGCTTGTTCATTGTTGAA
GATTGTTTTAGATTCATTGTTGTGATTGTGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCAATTATCAAATCTTCAATCTCCATAACTCTTCTAGTTCTTCTGTTGCTCTCTCGATCCCTATCAATTTTCGCCGCCGATCACGGCGTAACAGCTCATAATTC
TCTAGTCAAAATGTTTTCGATGGTAGACCATCATCAAGTTGTAGAGAATGAGAATGGATATCAATACTCTTTTGAGCAAAAAATCAGAAGGCGAGCTCGACGATCCATTA
AGAGAGCTGAAGGTCCAAGTCCATCAATGGCGAATCAGAGTCGAACGTCGTTGTTTGACATTAGGTCTTCGTTGTGTCTGTGTATTATTTTTGGCTTGTTCATTGTTGAA
GATTGTTTTAGATTCATTGTTGTGATTGTGGATTAA
Protein sequenceShow/hide protein sequence
MPPIIKSSISITLLVLLLLSRSLSIFAADHGVTAHNSLVKMFSMVDHHQVVENENGYQYSFEQKIRRRARRSIKRAEGPSPSMANQSRTSLFDIRSSLCLCIIFGLFIVE
DCFRFIVVIVD