; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G023830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiondesiccation-related protein PCC13-62-like
Genome locationchr02:30512688..30513744
RNA-Seq ExpressionLsi02G023830
SyntenyLsi02G023830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068016.1 desiccation-related protein PCC13-62-like [Cucumis melo var. makuwa]7.3e-4653.51Show/hide
Query:  LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNR-------------------YLSERE
        L   I G V PRPLLDL K+ I  L  +AFD PL PPFDPY  PL+  +L  FITY G+ GLV +AP     ++R                   YL +R 
Subjt:  LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNR-------------------YLSERE

Query:  NDRVVPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
        NDRV+PY ITVAEFT+ TSELANRLG+CG+KDEG+ VPR LGA+NRTESN+LA D NSL YTRT  E++R++ G    S PG F+
Subjt:  NDRVVPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
TYK18116.1 desiccation-related protein PCC13-62-like [Cucumis melo var. makuwa]1.0e-3955Show/hide
Query:  GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLSERENDRVVPYNITVAEFTSRTSELANRL
        G+   RPLL+L K+V +D+F +A    L P FDPY+  +N +L      Y G+VGLVGA P L L ++R   +R N+ V PYNITVAEFT+RTS LAN+L
Subjt:  GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLSERENDRVVPYNITVAEFTSRTSELANRL

Query:  GKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
          CGLKDEGI VPR LGA+NRTESN+LA DV S +Y+RT +E+LR++Y +G  S  GAF+
Subjt:  GKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
XP_008451604.1 PREDICTED: desiccation-related protein PCC13-62-like [Cucumis melo]7.3e-4653.51Show/hide
Query:  LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNR-------------------YLSERE
        L   I G V PRPLLDL K+ I  L  +AFD PL PPFDPY  PL+  +L  FITY G+ GLV +AP     ++R                   YL +R 
Subjt:  LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNR-------------------YLSERE

Query:  NDRVVPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
        NDRV+PY ITVAEFT+ TSELANRLG+CG+KDEG+ VPR LGA+NRTESN+LA D NSL YTRT  E++R++ G    S PG F+
Subjt:  NDRVVPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
XP_023515237.1 desiccation-related protein PCC13-62-like [Cucurbita pepo subsp. pepo]7.8e-4052.3Show/hide
Query:  RPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLS-------------------ERENDRVVPYNITV
        RPLL+L K V +DLF +A    L PPFDPY   ++ +L +    Y G  GLV AAP L  L++R L+                   ER N+ V PYN+TV
Subjt:  RPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLS-------------------ERENDRVVPYNITV

Query:  AEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
        AEFT+ TS LAN+LGKCGLKDEG+ VPR LGA+NRTE+NVLA D  SL+Y RT +EILR++YGTG   +PGAF+
Subjt:  AEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
XP_038898837.1 desiccation-related protein PCC13-62-like [Benincasa hispida]2.3e-4455.8Show/hide
Query:  IVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGA-------------APALALLKNR------YLSERENDRV
        IVG+VPPRPLL+L  +V+AD    A    LIP FDPYA   N +L  Q ITY   V LVGA             A  LA+   +      YL +R N  V
Subjt:  IVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGA-------------APALALLKNR------YLSERENDRV

Query:  VPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
        +PYNIT+AEFT+RTSEL NRL KCGLKDEGI VPR LGA+NRT+SN+LA D NSLAYTR TKE+LR+ YGTG  S PG+++
Subjt:  VPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
TrEMBL top hitse value%identityAlignment
A0A0A0K965 Uncharacterized protein6.5e-4050.28Show/hide
Query:  GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLS-------------------ERENDRVVP
        G+   RPLL+L K+V +D+F +A    L P FDPY+  +N +L      Y G+VGLVGA P L L ++R L+                   +R N+ V P
Subjt:  GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLS-------------------ERENDRVVP

Query:  YNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
        YNITVAEFT+ TS LAN+LGKCGL+DEGI VP  LGA+NRTESN+LA DVNS +Y+RT +E+LR++YG+G  S  GAF+
Subjt:  YNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
A0A1S3BRA4 desiccation-related protein PCC13-62-like3.5e-4653.51Show/hide
Query:  LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNR-------------------YLSERE
        L   I G V PRPLLDL K+ I  L  +AFD PL PPFDPY  PL+  +L  FITY G+ GLV +AP     ++R                   YL +R 
Subjt:  LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNR-------------------YLSERE

Query:  NDRVVPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
        NDRV+PY ITVAEFT+ TSELANRLG+CG+KDEG+ VPR LGA+NRTESN+LA D NSL YTRT  E++R++ G    S PG F+
Subjt:  NDRVVPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
A0A5A7VN58 Desiccation-related protein PCC13-62-like3.5e-4653.51Show/hide
Query:  LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNR-------------------YLSERE
        L   I G V PRPLLDL K+ I  L  +AFD PL PPFDPY  PL+  +L  FITY G+ GLV +AP     ++R                   YL +R 
Subjt:  LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNR-------------------YLSERE

Query:  NDRVVPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
        NDRV+PY ITVAEFT+ TSELANRLG+CG+KDEG+ VPR LGA+NRTESN+LA D NSL YTRT  E++R++ G    S PG F+
Subjt:  NDRVVPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
A0A5A7VQX7 Desiccation-related protein PCC13-62-like4.9e-4055Show/hide
Query:  GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLSERENDRVVPYNITVAEFTSRTSELANRL
        G+   RPLL+L K+V +D+F +A    L P FDPY+  +N +L      Y G+VGLVGA P L L ++R   +R N+ V PYNITVAEFT+RTS LAN+L
Subjt:  GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLSERENDRVVPYNITVAEFTSRTSELANRL

Query:  GKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
          CGLKDEGI VPR LGA+NRTESN+LA DV S +Y+RT +E+LR++Y +G  S  GAF+
Subjt:  GKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
A0A5D3D3T3 Desiccation-related protein PCC13-62-like4.9e-4055Show/hide
Query:  GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLSERENDRVVPYNITVAEFTSRTSELANRL
        G+   RPLL+L K+V +D+F +A    L P FDPY+  +N +L      Y G+VGLVGA P L L ++R   +R N+ V PYNITVAEFT+RTS LAN+L
Subjt:  GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLSERENDRVVPYNITVAEFTSRTSELANRL

Query:  GKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
          CGLKDEGI VPR LGA+NRTESN+LA DV S +Y+RT +E+LR++Y +G  S  GAF+
Subjt:  GKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
SwissProt top hitse value%identityAlignment
P22242 Desiccation-related protein PCC13-625.5e-2842.53Show/hide
Query:  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNR-------------------YLSERENDRVVPYNIT
        PRPLLDL  K  A +   AF + L PPFDPYA  +N +L    + Y G+ G VGA P L    +R                    L ER  D+V PY IT
Subjt:  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNR-------------------YLSERENDRVVPYNIT

Query:  VAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAF
        VAEFT++ SEL N+LG  G+KD G+ V   LGA+ +   NVLAGD NSLA+ RT +  L           P AF
Subjt:  VAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAF
Arabidopsis top hitse value%identityAlignment
AT1G47980.1 unknown protein2.9e-3241.38Show/hide
Query:  RPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYL------SERENDRVV-------------PYNITV
        RP LDL KK  A +  +AF    +PPF+PYA   N ++    + Y G+ G VGA P L    +R L       E   D V+             PY +TV
Subjt:  RPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYL------SERENDRVV-------------PYNITV

Query:  AEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
        A FT + S+L N+LGK G+KDEG+ VP+ +GA+ +   NVL G+  SL++ RT +EILR++YG+G  S+PG FY
Subjt:  AEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
AT3G62730.1 unknown protein3.2e-3142.61Show/hide
Query:  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLK-------------------NRYLSERENDRVVPY-NI
        PRPL++L ++  A    +A      P FDPYA  LN +L   +I Y G+ G VG  P L                          L ER+N++V  Y  +
Subjt:  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLK-------------------NRYLSERENDRVVPY-NI

Query:  TVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY
        TVAE T+  S L N LG CG+KDEG+ VP  LGA+NRT SN+L+ D  SL+Y RT +EILRV+YGTG    PG F+
Subjt:  TVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGGAAGTTTAATTGTGGGAAAAGTTCCTCCAAGGCCATTGTTGGATCTAAGAAAGAAAGTTATTGCAGACCTTTTTCAACAAGCATTTGACGAGCCACTCATTCCTCC
TTTCGACCCTTATGCCACTCCCCTTAACATCGTCCTCCTTCTTCAGTTCATTACTTACAACGGAATGGTCGGCCTCGTCGGAGCAGCCCCGGCGTTAGCTTTGCTTAAAA
ATCGGTATTTGTCCGAAAGGGAAAATGACAGGGTGGTTCCCTATAATATAACTGTGGCGGAGTTCACGAGTCGCACGTCGGAGTTGGCGAACCGGCTCGGGAAATGTGGT
CTGAAAGACGAAGGAATTAGGGTTCCTCGGCCGCTCGGGGCAGATAATCGAACCGAGAGCAACGTTCTTGCTGGTGATGTTAACTCTCTTGCATATACACGAACTACAAA
GGAGATCTTGCGCGTAATTTATGGAACCGGCCGTGCAAGTATCCCTGGTGCATTTTATACCCAA
mRNA sequenceShow/hide mRNA sequence
CTTGGAAGTTTAATTGTGGGAAAAGTTCCTCCAAGGCCATTGTTGGATCTAAGAAAGAAAGTTATTGCAGACCTTTTTCAACAAGCATTTGACGAGCCACTCATTCCTCC
TTTCGACCCTTATGCCACTCCCCTTAACATCGTCCTCCTTCTTCAGTTCATTACTTACAACGGAATGGTCGGCCTCGTCGGAGCAGCCCCGGCGTTAGCTTTGCTTAAAA
ATCGGTATTTGTCCGAAAGGGAAAATGACAGGGTGGTTCCCTATAATATAACTGTGGCGGAGTTCACGAGTCGCACGTCGGAGTTGGCGAACCGGCTCGGGAAATGTGGT
CTGAAAGACGAAGGAATTAGGGTTCCTCGGCCGCTCGGGGCAGATAATCGAACCGAGAGCAACGTTCTTGCTGGTGATGTTAACTCTCTTGCATATACACGAACTACAAA
GGAGATCTTGCGCGTAATTTATGGAACCGGCCGTGCAAGTATCCCTGGTGCATTTTATACCCAA
Protein sequenceShow/hide protein sequence
LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLSERENDRVVPYNITVAEFTSRTSELANRLGKCG
LKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFYTQ