; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G023870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G023870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranslocator protein-like protein
Genome locationchr02:30547474..30548049
RNA-Seq ExpressionLsi02G023870
SyntenyLsi02G023870
Gene Ontology termsGO:0050896 - response to stimulus (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsIPR004307 - TspO/MBR-related protein
IPR038330 - TspO/MBR-related superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068008.1 translocator protein-like protein [Cucumis melo var. makuwa]2.8e-7882.2Show/hide
Query:  MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAA
        MAST+LKHRKTD+ + + TV A  N G KKA+NK IAKRGL+SLALAISIPVSLTLL IFL SN KNYYPAS  R FWVPSTKVVNWGSLTSSLLMGVAA
Subjt:  MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAA

Query:  WLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL
        WLVWAEGGFH+RPNALY+YGLYL + +AWY LV GAGA+RL SLACLGKTAALVGCDRLFR VNPIAADLVKPCLVWSV LTVV LTMASL
Subjt:  WLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL

KAG6575839.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6872.31Show/hide
Query:  MASTELKHRKTDEDSSSPTVP----AADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLM
        MASTELKHR T +   SPTVP    AAD   AK+ KNKAIAKRGLKSLA+A+SIP+++TLLSI LL+ PKNYYP S  + FWVPS +VVNWGSL SSLLM
Subjt:  MASTELKHRKTDEDSSSPTVP----AADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLM

Query:  GVAAWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL
        G+++WL WAEGGF ARPNALY+Y LYL +C+AWYGLVLGAG++ LGS+ACLGKTA LVGCDRLFR VN IAADLV+PCLVWSVFLT+V+LTM ++
Subjt:  GVAAWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL

XP_022992488.1 translocator protein homolog [Cucurbita maxima]9.1e-6973.44Show/hide
Query:  MASTELKHRKTDEDSSSPTVP-AADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVA
        MASTELKHR T +   SP VP AAD    K+AKNKAIAKRGLKSLA+A+SIP+++TLLSI LLS PKNYYP S  + FWVPS +VVNWGSL SSLLMG++
Subjt:  MASTELKHRKTDEDSSSPTVP-AADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVA

Query:  AWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL
        +WL WAEGGF A+PNALY+Y LYL +C+AWYGLVLGAG++ LGS+ACLGKTA LVGCDRLFR VN IAADLV+PCLVWSVFLT+V+LTM S+
Subjt:  AWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL

XP_023548365.1 translocator protein homolog [Cucurbita pepo subsp. pepo]3.7e-7073.3Show/hide
Query:  MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAA
        MASTELKHR T +   SP  PAAD + AK+AKNKAIAKRGLKSLA+A+SIP+++TLLSI LLS PKNYYP S  + FWVPS +VVNWGSL SSLLMG+++
Subjt:  MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAA

Query:  WLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL
        WL WAEGGF A+PNA+Y+Y LYL +C+AWYGLVLGAG++ LGS+ACLGKTA LVGCDRLFR VN IAADLV+PCLVWSVFLT+V+LTM S+
Subjt:  WLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL

XP_038897197.1 translocator protein homolog [Benincasa hispida]5.7e-8789.53Show/hide
Query:  MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAA
        MASTELKHRKTD DSSSPTVPAADN GAKKAKNKAI KRGLKSLALAI+IP+SLTLLS+FLLSNPKNYYPAS AR FW+PS KVVNWGSLTSSLLMGVAA
Subjt:  MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAA

Query:  WLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL
        WLVWAEGGFHA+PNALY+Y LYLA+CVAWY LV GAGA+RLGSLACLGKTAALVGCDRLFR VNPIAADLVKPCLVWSVFLTVV LTM SL
Subjt:  WLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL

TrEMBL top hitse value%identityAlignment
A0A0A0KAU9 Uncharacterized protein6.4e-7678.01Show/hide
Query:  MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAA
        MAST+LKHRKTD+ + + TV A DN G KK+KNK IAKRGL+SLALAISIPVSLTL  I L SN KNYYPAS  + FWVPS KVVNWGSLTSSLLMGVAA
Subjt:  MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAA

Query:  WLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL
        WLVWAEGGFHARPNALY+YGLY  +C+ WY L+ GAGA+RL +LACLGKTAALVGCDRLFR VNP+AADLVKPCLVWSV LTVV LT+ SL
Subjt:  WLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL

A0A5A7VJL5 Translocator protein-like protein1.4e-7882.2Show/hide
Query:  MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAA
        MAST+LKHRKTD+ + + TV A  N G KKA+NK IAKRGL+SLALAISIPVSLTLL IFL SN KNYYPAS  R FWVPSTKVVNWGSLTSSLLMGVAA
Subjt:  MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAA

Query:  WLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL
        WLVWAEGGFH+RPNALY+YGLYL + +AWY LV GAGA+RL SLACLGKTAALVGCDRLFR VNPIAADLVKPCLVWSV LTVV LTMASL
Subjt:  WLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL

A0A6J1DBR2 translocator protein homolog5.1e-5764.06Show/hide
Query:  MASTELKHRKTDE--DSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGV
        MAS +LKHRK  E  DS++ T PA         K  A A+RGLKSLA+A+S+PVSL+LL+++LLS+P  + P+S  + FW PS   VN GS  SSLLMG 
Subjt:  MASTELKHRKTDE--DSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGV

Query:  AAWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMAS
        A WLVWA+GGFH+ PNALY+Y LY+ +C  WYGL+LGAGA RL ++ACL KTAALVGCDRLFRRVNPIAADLVKPCL WSVFLTVV LTM +
Subjt:  AAWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMAS

A0A6J1GQH6 translocator protein homolog1.7e-6872.92Show/hide
Query:  MASTELKHRKTDEDSSSPTVP-AADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVA
        MASTELKHR T +   SP VP AAD   AK+ KNKAIAKRGLKSLA+A+SIP+++TLLSI LL+ PKNYYP S  + FWVPS +VVNWGSL SSLLMG++
Subjt:  MASTELKHRKTDEDSSSPTVP-AADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVA

Query:  AWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL
        +WL WAEGGF ARPNALY+Y LYL +C+AW+GLVLGAG++ LGS+ACLGKTA LVGCDRLFR VN IAADLV+PCLVWSVFLT+V+LTM S+
Subjt:  AWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL

A0A6J1JZC9 translocator protein homolog4.4e-6973.44Show/hide
Query:  MASTELKHRKTDEDSSSPTVP-AADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVA
        MASTELKHR T +   SP VP AAD    K+AKNKAIAKRGLKSLA+A+SIP+++TLLSI LLS PKNYYP S  + FWVPS +VVNWGSL SSLLMG++
Subjt:  MASTELKHRKTDEDSSSPTVP-AADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVA

Query:  AWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL
        +WL WAEGGF A+PNALY+Y LYL +C+AWYGLVLGAG++ LGS+ACLGKTA LVGCDRLFR VN IAADLV+PCLVWSVFLT+V+LTM S+
Subjt:  AWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL

SwissProt top hitse value%identityAlignment
O82245 Translocator protein homolog5.1e-3037.44Show/hide
Query:  MASTELKHRKTDEDSSSPTVPA------ADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSL
        M S ++++R  D+  ++ T  A      AD++  K+ + +A+AKRGLKSL +A++ PV +TL + + L     Y   + +   W+P   +++   L SS 
Subjt:  MASTELKHRKTDEDSSSPTVPA------ADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSL

Query:  LMGVAAWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMA
        LMG+AAWLVW +GGFH +PNALY+Y     +C+ W  +    G+   G    LG++AAL GC + F  ++P+A +LVKPCL W+ F+  V + +A
Subjt:  LMGVAAWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMA

Arabidopsis top hitse value%identityAlignment
AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related3.6e-3137.44Show/hide
Query:  MASTELKHRKTDEDSSSPTVPA------ADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSL
        M S ++++R  D+  ++ T  A      AD++  K+ + +A+AKRGLKSL +A++ PV +TL + + L     Y   + +   W+P   +++   L SS 
Subjt:  MASTELKHRKTDEDSSSPTVPA------ADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSL

Query:  LMGVAAWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMA
        LMG+AAWLVW +GGFH +PNALY+Y     +C+ W  +    G+   G    LG++AAL GC + F  ++P+A +LVKPCL W+ F+  V + +A
Subjt:  LMGVAAWLVWAEGGFHARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACCGAGCTAAAACACCGAAAAACAGACGAGGATTCCTCCTCCCCCACCGTCCCCGCCGCCGACAACAGCGGTGCTAAGAAAGCAAAGAACAAAGCCATAGC
CAAACGAGGCCTAAAGTCTCTAGCTCTTGCAATCTCTATCCCCGTTTCGCTCACTCTTCTCTCCATCTTCCTCCTCTCTAACCCCAAAAACTACTACCCGGCCTCCGTCG
CGAGGCTCTTTTGGGTCCCGTCGACGAAGGTCGTTAATTGGGGGTCTTTGACTTCTAGCTTATTGATGGGCGTGGCGGCCTGGCTGGTCTGGGCCGAGGGCGGGTTCCAC
GCCAGGCCCAACGCCCTCTACATTTATGGGTTGTACTTGGCGATGTGCGTGGCGTGGTACGGCCTCGTGCTTGGAGCTGGCGCGCAACGGCTCGGCTCGTTGGCGTGTTT
GGGAAAGACGGCGGCGTTGGTTGGGTGCGACCGGTTGTTCCGGAGAGTGAACCCGATTGCGGCGGACTTGGTTAAGCCTTGTTTGGTTTGGTCTGTTTTTCTTACGGTTG
TGACTCTTACTATGGCTTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACCGAGCTAAAACACCGAAAAACAGACGAGGATTCCTCCTCCCCCACCGTCCCCGCCGCCGACAACAGCGGTGCTAAGAAAGCAAAGAACAAAGCCATAGC
CAAACGAGGCCTAAAGTCTCTAGCTCTTGCAATCTCTATCCCCGTTTCGCTCACTCTTCTCTCCATCTTCCTCCTCTCTAACCCCAAAAACTACTACCCGGCCTCCGTCG
CGAGGCTCTTTTGGGTCCCGTCGACGAAGGTCGTTAATTGGGGGTCTTTGACTTCTAGCTTATTGATGGGCGTGGCGGCCTGGCTGGTCTGGGCCGAGGGCGGGTTCCAC
GCCAGGCCCAACGCCCTCTACATTTATGGGTTGTACTTGGCGATGTGCGTGGCGTGGTACGGCCTCGTGCTTGGAGCTGGCGCGCAACGGCTCGGCTCGTTGGCGTGTTT
GGGAAAGACGGCGGCGTTGGTTGGGTGCGACCGGTTGTTCCGGAGAGTGAACCCGATTGCGGCGGACTTGGTTAAGCCTTGTTTGGTTTGGTCTGTTTTTCTTACGGTTG
TGACTCTTACTATGGCTTCTCTTTGA
Protein sequenceShow/hide protein sequence
MASTELKHRKTDEDSSSPTVPAADNSGAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYYPASVARLFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFH
ARPNALYIYGLYLAMCVAWYGLVLGAGAQRLGSLACLGKTAALVGCDRLFRRVNPIAADLVKPCLVWSVFLTVVTLTMASL