; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G024060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionouter envelope pore protein 16-4, chloroplastic
Genome locationchr02:30678583..30681766
RNA-Seq ExpressionLsi02G024060
SyntenyLsi02G024060
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
InterPro domainsIPR039175 - Mitochondrial import inner membrane translocase subunit TIM22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136026.1 outer envelope pore protein 16-4, chloroplastic [Cucumis sativus]6.5e-3156.36Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVW-VRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL
        MEDELNGVVPCSSLAVES+IRVGT                             AL+G+C+    +    +  VA A  ++        +       C  L
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVW-VRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL

Query:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        VAGTFTLTHCGIQRYR++NDWLNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_008451566.1 PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo]3.8e-3157.32Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRLV
        MEDELNGVVPCSSLAVES+IRVGT                             AL+G+C+          S  S      +S+            C  LV
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRLV

Query:  AGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        AGTFTLTHCGIQRYRR+NDWLNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  AGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_022143748.1 outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia]2.9e-3157.58Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVW-VRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL
        MEDELNGVVPCSSLAVESTIRVGT                             AL+G+C+    +    +  V  A  ++        +       C  L
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVW-VRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL

Query:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_022960078.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata]2.2e-3157.99Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMV-----D
        MEDELNGVVPCSSLAVESTIRVGT                             AL+G+C         M    S    +  S +++ AF    V      
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMV-----D

Query:  CLRLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        C  LVAG FTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  CLRLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_038896772.1 outer envelope pore protein 16-4, chloroplastic [Benincasa hispida]1.1e-3056.36Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVW-VRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL
        ME+ELNGVVPCSSLAVESTIRVGT                             AL+G+C+    +    ++ V  A  ++        +       C  L
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVW-VRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL

Query:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGA IATRTRSWSQVVGM ALVSAFSAAAEYS+SL
Subjt:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

TrEMBL top hitse value%identityAlignment
A0A1S3BSK4 outer envelope pore protein 16-4, chloroplastic1.8e-3157.32Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRLV
        MEDELNGVVPCSSLAVES+IRVGT                             AL+G+C+          S  S      +S+            C  LV
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRLV

Query:  AGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        AGTFTLTHCGIQRYRR+NDWLNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  AGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A5A7VIR9 Outer envelope pore protein 16-41.8e-3157.32Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRLV
        MEDELNGVVPCSSLAVES+IRVGT                             AL+G+C+          S  S      +S+            C  LV
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRLV

Query:  AGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        AGTFTLTHCGIQRYRR+NDWLNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  AGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A6J1CRH2 outer envelope pore protein 16-4, chloroplastic isoform X21.4e-3157.58Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVW-VRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL
        MEDELNGVVPCSSLAVESTIRVGT                             AL+G+C+    +    +  V  A  ++        +       C  L
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVW-VRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL

Query:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A6J1H7T5 outer envelope pore protein 16-4, chloroplastic1.1e-3157.99Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMV-----D
        MEDELNGVVPCSSLAVESTIRVGT                             AL+G+C         M    S    +  S +++ AF    V      
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMV-----D

Query:  CLRLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        C  LVAG FTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  CLRLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A6J1KSU1 outer envelope pore protein 16-4, chloroplastic1.1e-3157.99Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMV-----D
        MEDELNGVVPCSSLAVESTIRVGT                             AL+G+C         M    S    +  S +++ AF    V      
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMV-----D

Query:  CLRLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        C  LVAG FTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  CLRLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

SwissProt top hitse value%identityAlignment
Q5BIN4 Mitochondrial import inner membrane translocase subunit Tim221.8e-0438.71Show/hide
Query:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY
        +V   F+ T C ++ YR K+DW N +I+G + G AI  R    + V+G     +AFSAA +Y
Subjt:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY

Q9CQ85 Mitochondrial import inner membrane translocase subunit Tim225.4e-0437.1Show/hide
Query:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY
        +V   F+ T C ++ YR K+DW N +I+G + G AI  R    +  +G     +AFSAA +Y
Subjt:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY

Q9JKW1 Mitochondrial import inner membrane translocase subunit Tim225.4e-0437.1Show/hide
Query:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY
        +V   F+ T C ++ YR K+DW N +I+G + G AI  R    +  +G     +AFSAA +Y
Subjt:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY

Q9LZH8 Outer envelope pore protein 16-4, chloroplastic1.7e-2140.85Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTI-LVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL
        ME+EL   VPCSSL VES +RV T                              LYG+C   R    + ++ V+ A  ++    +    F         L
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTI-LVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL

Query:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS
        V+G FT+THCG+QRYR KNDW+N L+ GAVAGAA+A  TR+W+QVVGMA LVSAFS  A  +++
Subjt:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS

Arabidopsis top hitse value%identityAlignment
AT3G62880.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein1.2e-2240.85Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTI-LVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL
        ME+EL   VPCSSL VES +RV T                              LYG+C   R    + ++ V+ A  ++    +    F         L
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTI-LVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL

Query:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS
        V+G FT+THCG+QRYR KNDW+N L+ GAVAGAA+A  TR+W+QVVGMA LVSAFS  A  +++
Subjt:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS

AT3G62880.2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein1.2e-2240.85Show/hide
Query:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTI-LVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL
        ME+EL   VPCSSL VES +RV T                              LYG+C   R    + ++ V+ A  ++    +    F         L
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTI-LVKMASVASAMLLSWRSLLENTAFNVVMVDCLRL

Query:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS
        V+G FT+THCG+QRYR KNDW+N L+ GAVAGAA+A  TR+W+QVVGMA LVSAFS  A  +++
Subjt:  VAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGAACTCAACGGCGTCGTTCCATGTTCATCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGTAAACTTAACGAACAATTCCTCAAACTGTGATTCGTT
TGCTATAATTCTCCCTCTGAATCGCTTTTTCCTGTTCATCTTCAGGCCGGCGCTCTATGGGGTTTGTGTATGGGTCCGTACAATTCTCGTAAAAATGGCCTCAGTGGCGT
CGGCCATGCTGCTTTCGTGGCGAAGTCTGTTGGAAAATACGGCTTTCAATGTGGTAATGGTTGATTGTCTTAGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGG
ATTCAAAGATATAGAAGGAAGAATGATTGGTTGAATGGTTTGATTGCGGGTGCGGTCGCAGGAGCAGCGATTGCTACAAGGACTAGAAGTTGGTCGCAGGTAGTTGGGAT
GGCTGCCCTTGTCTCTGCCTTCAGTGCTGCTGCTGAATATTCAAAATCACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACGAACTCAACGGCGTCGTTCCATGTTCATCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGTAAACTTAACGAACAATTCCTCAAACTGTGATTCGTT
TGCTATAATTCTCCCTCTGAATCGCTTTTTCCTGTTCATCTTCAGGCCGGCGCTCTATGGGGTTTGTGTATGGGTCCGTACAATTCTCGTAAAAATGGCCTCAGTGGCGT
CGGCCATGCTGCTTTCGTGGCGAAGTCTGTTGGAAAATACGGCTTTCAATGTGGTAATGGTTGATTGTCTTAGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGG
ATTCAAAGATATAGAAGGAAGAATGATTGGTTGAATGGTTTGATTGCGGGTGCGGTCGCAGGAGCAGCGATTGCTACAAGGACTAGAAGTTGGTCGCAGGTAGTTGGGAT
GGCTGCCCTTGTCTCTGCCTTCAGTGCTGCTGCTGAATATTCAAAATCACTTTAG
Protein sequenceShow/hide protein sequence
MEDELNGVVPCSSLAVESTIRVGTVNLTNNSSNCDSFAIILPLNRFFLFIFRPALYGVCVWVRTILVKMASVASAMLLSWRSLLENTAFNVVMVDCLRLVAGTFTLTHCG
IQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL