CuGenDBv2

Gene ID	Lsi02G024070
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	60S ribosomal protein L22-2
Genome location	chr02:30684491..30686433
RNA-Seq Expression	Lsi02G024070
Synteny	Lsi02G024070
Gene Ontology terms	GO:0002181 - cytoplasmic translation (biological process) GO:0006979 - response to oxidative stress (biological process) GO:0042744 - hydrogen peroxide catabolic process (biological process) GO:0098869 - cellular oxidant detoxification (biological process) GO:0005576 - extracellular region (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005840 - ribosome (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0004601 - peroxidase activity (molecular function) GO:0020037 - heme binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR002671 - Ribosomal protein L22e IPR038526 - Ribosomal protein L22e superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136027.1 60S ribosomal protein L22-2 [Cucumis sativus]

9.4e-33

96.25

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

XP_022960081.1 60S ribosomal protein L22-2-like [Cucurbita moschata]

4.7e-32

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRGAAASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

XP_022991268.1 60S ribosomal protein L22-2-like [Cucurbita maxima]

2.1e-32

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTR+KNKITVNSDSNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

XP_023514139.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]

1.4e-31

93.75

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRGAAASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGA GDSVTVTR+KNKITVNSDSNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

XP_023548993.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]

2.1e-32

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTR+KNKITVNSDSNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K637 Uncharacterized protein

4.5e-33

96.25

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

A0A1S3BRQ9 60S ribosomal protein L22-2

4.5e-33

96.25

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

A0A5D3D2W6 60S ribosomal protein L22-2-like

4.5e-33

96.25

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

A0A6J1DLK6 60S ribosomal protein L22-2

4.5e-33

96.25

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

A0A6J1JVR1 60S ribosomal protein L22-2-like

1.0e-32

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTR+KNKITVNSDSNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

SwissProt top hits

e value

%identity

Alignment

P47198 60S ribosomal protein L22

3.0e-13

57.33

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Query:  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTREKNKITVNSDSNFSKSF
        A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KITV S+  FSK +
Subjt:  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTREKNKITVNSDSNFSKSF

Q98TF8 60S ribosomal protein L22

2.3e-13

57.89

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Query:  AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTREKNKITVNSDSNFSKSF
        AA GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KITV S+  FSK +
Subjt:  AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTREKNKITVNSDSNFSKSF

Q9FE58 60S ribosomal protein L22-3

3.4e-25

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TREK+KITV +D  FSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

Q9M9W1 60S ribosomal protein L22-2

1.5e-25

76.25

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TREK+KITV +D  FSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

Q9SRX7 Putative 60S ribosomal protein L22-1

5.0e-21

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR   KI VN++SNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

Arabidopsis top hits

e value

%identity

Alignment

AT1G02830.1 Ribosomal L22e protein family

3.6e-22

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR   KI VN++SNFSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

AT3G05560.1 Ribosomal L22e protein family

1.1e-26

76.25

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TREK+KITV +D  FSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

AT3G05560.2 Ribosomal L22e protein family

1.1e-26

76.25

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TREK+KITV +D  FSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

AT3G05560.3 Ribosomal L22e protein family

1.1e-26

76.25

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TREK+KITV +D  FSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

AT5G27770.1 Ribosomal L22e protein family

2.4e-26

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Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF
        MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TREK+KITV +D  FSK +
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSF

Sequences

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CDS sequence

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ATGGTTAGGGCAACAAGTTGCAGAGCAGAAGCAAAAATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGTGTGACCTTCGTCATCGATTGTGC
GAAGCCAGTTGAGGACAAGATCATGGACATCGCCTCGTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGTAAAGCCGGGGCACTTGGTGACTCGGTTACCGTCA
CTCGGGAGAAGAACAAGATCACCGTCAACTCCGATAGCAATTTCTCCAAGAGTTTCGGCACTTTCCAAAAGAAAATTGGCTAA

mRNA sequence

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Protein sequence

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MVRATSCRAEAKMSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKSFGTFQKKIG

Lsi02G024070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome