; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G024110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF538
Genome locationchr02:30760526..30760990
RNA-Seq ExpressionLsi02G024110
SyntenyLsi02G024110
Gene Ontology termsNA
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646343.1 hypothetical protein Csa_016699 [Cucumis sativus]8.7e-7087.5Show/hide
Query:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
        MSPTV  SP  +NG+APSVYDILREFNFP GLLPEG+VGCKLDRTTGKLEA+L+ SCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
Subjt:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV

Query:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRK
        EVVRNGDDL+FS+GMATASFPVDNFSECPPGGCGVDC++GK ++
Subjt:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRK

KAG7030212.1 hypothetical protein SDJN02_08559, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-6581.58Show/hide
Query:  TVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVV
        T A SP T+NGEAPSVYDILREFNFP GLLPEGVVGC LDRTTGKLEA+L  +C FSP++PYEL+YK+TISG IS+NRLT+LKGV+VKFMFFWVNIVEVV
Subjt:  TVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVV

Query:  RNGDDLQFSVGMATASFPVDNFSEC-PPGGCGVDCNNGKVRKIKAKSLVSSA
        RNGDDL FSVG+ATASFPVDNFSEC PPGGCG DC NGK  KIK KSLVS A
Subjt:  RNGDDLQFSVGMATASFPVDNFSEC-PPGGCGVDCNNGKVRKIKAKSLVSSA

XP_004136167.1 uncharacterized protein LOC101222381 [Cucumis sativus]6.2e-7690.26Show/hide
Query:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
        MSPTV  SP  +NG+APSVYDILREFNFP GLLPEG+VGCKLDRTTGKLEA+L+ SCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
Subjt:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV

Query:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA
        EVVRNGDDL+FS+GMATASFPVDNFSECPPGGCGVDC++GKVRKIKAKSLVSSA
Subjt:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA

XP_008451557.1 PREDICTED: uncharacterized protein LOC103492802 [Cucumis melo]9.6e-7792.21Show/hide
Query:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
        MSPTV   P TSNGEAPSVYDILREFNFP GLLPEGVVGCKLDRTTGKLEA+L+ SCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
Subjt:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV

Query:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA
        EVVRNGDDL+FS+GMATASFPVDNFSECPPG CGVDCN+GKVRKIKAKSLVSSA
Subjt:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA

XP_038896189.1 uncharacterized protein LOC120084473 [Benincasa hispida]1.4e-7592.86Show/hide
Query:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
        MSPTV  SP TS+ EA SVYDILREFNFP GLLPEGVVG KLDRTTGKLEA+L+GSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
Subjt:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV

Query:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA
        EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCN+GKVRKIKAKSLVSSA
Subjt:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA

TrEMBL top hitse value%identityAlignment
A0A0A0K643 Uncharacterized protein3.0e-7690.26Show/hide
Query:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
        MSPTV  SP  +NG+APSVYDILREFNFP GLLPEG+VGCKLDRTTGKLEA+L+ SCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
Subjt:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV

Query:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA
        EVVRNGDDL+FS+GMATASFPVDNFSECPPGGCGVDC++GKVRKIKAKSLVSSA
Subjt:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA

A0A1S3BR55 uncharacterized protein LOC1034928024.6e-7792.21Show/hide
Query:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
        MSPTV   P TSNGEAPSVYDILREFNFP GLLPEGVVGCKLDRTTGKLEA+L+ SCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
Subjt:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV

Query:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA
        EVVRNGDDL+FS+GMATASFPVDNFSECPPG CGVDCN+GKVRKIKAKSLVSSA
Subjt:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA

A0A5A7VQJ7 Uncharacterized protein4.6e-7792.21Show/hide
Query:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
        MSPTV   P TSNGEAPSVYDILREFNFP GLLPEGVVGCKLDRTTGKLEA+L+ SCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
Subjt:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV

Query:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA
        EVVRNGDDL+FS+GMATASFPVDNFSECPPG CGVDCN+GKVRKIKAKSLVSSA
Subjt:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA

A0A6J1H8I6 uncharacterized protein LOC1114610363.1e-6581.58Show/hide
Query:  TVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVV
        T A SP T+NGEAPSVYDILREFNFP GLLPEGVVGC LDRTTGKLEA+L  +C FSP++PYEL+YK+TISG IS+NRLT+LKGV+VKFMFFWVNIVEVV
Subjt:  TVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVV

Query:  RNGDDLQFSVGMATASFPVDNFSEC-PPGGCGVDCNNGKVRKIKAKSLVSSA
        RNGDDL FSVG+ATASFPVDNFSEC PPGGCG DC NGK  KIK KSLVS A
Subjt:  RNGDDLQFSVGMATASFPVDNFSEC-PPGGCGVDCNNGKVRKIKAKSLVSSA

A0A6J1KX02 uncharacterized protein LOC1114979013.1e-6581.58Show/hide
Query:  TVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVV
        T A SP T+NGEAPSVYDILREFNFP GLLPEGVVGC LDRTTGKLEA+L  +C FSP++PYEL+YK+TISG IS+NRLT+LKGV+VKFMFFWVNIVEVV
Subjt:  TVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVV

Query:  RNGDDLQFSVGMATASFPVDNFSEC-PPGGCGVDCNNGKVRKIKAKSLVSSA
        RNGDDL FSVG+ATASFPVDNFSEC PPGGCG DC NGK  KIK KSLVS A
Subjt:  RNGDDLQFSVGMATASFPVDNFSEC-PPGGCGVDCNNGKVRKIKAKSLVSSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02813.1 Protein of unknown function, DUF5383.3e-2744.36Show/hide
Query:  VAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVVR
        ++ S   S  +  SVY +L  +  P+G+LPEGV    L+R TG  +     +C FS D  Y++KYK  ISG I+R R+  L GVSVK +FFW+NI EV R
Subjt:  VAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVVR

Query:  NGDDLQFSVGMATASFPVDNFSECPPGGCGVDC
        +GDD++F VG A+  F    F + P  GCG +C
Subjt:  NGDDLQFSVGMATASFPVDNFSECPPGGCGVDC

AT1G02816.1 Protein of unknown function, DUF5382.7e-3747.37Show/hide
Query:  SPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVE
        SP +A +   ++ + P+ Y +L+ +NFP G+LP+GVV   LD++TG+  A+   SC F+    Y+L YKSTISG IS N++T L GV VK +F W+NIVE
Subjt:  SPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVE

Query:  VVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSS
        V+RNGD+L+FSVG+ +A+F +D F E P  GCG DC   K + +     VSS
Subjt:  VVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSS

AT4G02360.1 Protein of unknown function, DUF5381.5e-3553.91Show/hide
Query:  NGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVVRNGDDLQFS
        +G+ P+ YD ++ +N P G+LP+GVV  +L+  TG  + +   +C F+  + Y+LKYKSTISG IS   + NLKGVSVK +FFWVNI EV  +G DL FS
Subjt:  NGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVVRNGDDLQFS

Query:  VGMATASFPVDNFSECPPGGCGVDCNNG
        VG+A+ASFP  NF E P  GCG DCNNG
Subjt:  VGMATASFPVDNFSECPPGGCGVDCNNG

AT4G02370.1 Protein of unknown function, DUF5384.6e-3745.45Show/hide
Query:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV
        +S   A     +  + P+ Y +L+ +NFP G+LP+GVV   LD TTGK  A+   SC F+    Y+L YKSTISG IS N+L  L GV VK +F W+NIV
Subjt:  MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIV

Query:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA
        EV+RNGD+++FSVG+ +A+F +  F E P  GCG +C + K+  I+    +SS+
Subjt:  EVVRNGDDLQFSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA

AT5G19860.1 Protein of unknown function, DUF5383.6e-1332.03Show/hide
Query:  SVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEV---VRNGDDLQFSVG
        +VY++L ++  P GLLP+ V    L    G+   HL  SC    D  Y + Y  TISG I    +T LKG+ VK  F W+++ E+   +   D + F VG
Subjt:  SVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEV---VRNGDDLQFSVG

Query:  MATASFPVDNFS---ECPPGGCGVDCNN
               +D F     C   G    C +
Subjt:  MATASFPVDNFS---ECPPGGCGVDCNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCCACCGTCGCGGTGTCGCCCCCCACCAGCAATGGTGAAGCCCCGTCGGTGTACGACATTCTCCGAGAATTCAACTTCCCAAAAGGTCTCCTTCCAGAAGGTGT
CGTGGGTTGCAAGTTAGATCGAACTACTGGAAAATTGGAGGCTCATTTGAGGGGATCATGTCATTTCTCACCAGATGAGCCATATGAATTGAAATACAAATCCACTATTA
GTGGAAACATTTCGAGGAATAGATTGACAAATTTGAAGGGGGTAAGTGTGAAGTTCATGTTCTTTTGGGTCAACATTGTGGAGGTGGTGAGAAATGGCGACGATCTACAA
TTCTCGGTTGGGATGGCTACGGCATCGTTTCCTGTGGATAATTTCTCCGAGTGCCCGCCCGGTGGGTGCGGAGTCGATTGCAACAATGGTAAGGTCAGGAAAATTAAAGC
CAAATCTCTTGTTTCATCAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCCACCGTCGCGGTGTCGCCCCCCACCAGCAATGGTGAAGCCCCGTCGGTGTACGACATTCTCCGAGAATTCAACTTCCCAAAAGGTCTCCTTCCAGAAGGTGT
CGTGGGTTGCAAGTTAGATCGAACTACTGGAAAATTGGAGGCTCATTTGAGGGGATCATGTCATTTCTCACCAGATGAGCCATATGAATTGAAATACAAATCCACTATTA
GTGGAAACATTTCGAGGAATAGATTGACAAATTTGAAGGGGGTAAGTGTGAAGTTCATGTTCTTTTGGGTCAACATTGTGGAGGTGGTGAGAAATGGCGACGATCTACAA
TTCTCGGTTGGGATGGCTACGGCATCGTTTCCTGTGGATAATTTCTCCGAGTGCCCGCCCGGTGGGTGCGGAGTCGATTGCAACAATGGTAAGGTCAGGAAAATTAAAGC
CAAATCTCTTGTTTCATCAGCTTGA
Protein sequenceShow/hide protein sequence
MSPTVAVSPPTSNGEAPSVYDILREFNFPKGLLPEGVVGCKLDRTTGKLEAHLRGSCHFSPDEPYELKYKSTISGNISRNRLTNLKGVSVKFMFFWVNIVEVVRNGDDLQ
FSVGMATASFPVDNFSECPPGGCGVDCNNGKVRKIKAKSLVSSA