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Lsi02G024120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF538
Genome locationchr02:30764488..30764964
RNA-Seq ExpressionLsi02G024120
SyntenyLsi02G024120
Gene Ontology termsNA
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136020.3 uncharacterized protein LOC101206914 [Cucumis sativus]1.4e-6786.79Show/hide
Query:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS
        MSFSKLMASLLLLA IS S+S VS  +ALTAYDILQQYGFPVGILPIG TGY+LNRATGEFSL+L+QKCKFKI+SYELEYKST++GVIS+GRIRKLKGVS
Subjt:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS

Query:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDK-VGSLVSAS
        VKI LLWLSIVEVVNDG+DLQFSVGIASANFPLDSFYESP+CGCGFDCD   GSLVSAS
Subjt:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDK-VGSLVSAS

XP_008451556.1 PREDICTED: uncharacterized protein LOC103492801 [Cucumis melo]7.5e-6987.42Show/hide
Query:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS
        MSFSKL+ASLLLLA IS S+S +S  K LTAYDILQQYGFPVGILPIG TGYELNRATGEFSL+LNQ+CKFKI+SYELEYKST++GVISQGRIRKLKGVS
Subjt:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS

Query:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDK-VGSLVSAS
        VKIVLLWLSIVEVVNDG+DLQFSVGIASANFPLDSFYESP+CGCGFDCD   GSLVSAS
Subjt:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDK-VGSLVSAS

XP_022953728.1 uncharacterized protein LOC111456173 [Cucurbita moschata]1.2e-6682.91Show/hide
Query:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS
        MSFSKLMASLL LAF+SFSS  VSAQKALTAYDI+QQYGFPVGILP+GVTGY+L+R TG FSLFL+QKCKF I+SYELEYK T+ GVISQG++ KLKGVS
Subjt:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS

Query:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS
        VKI++LWLSIVEVV+DG++L FSVGIASANFP+DSFYESPQCGCGFDC+KVGSLVSAS
Subjt:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS

XP_022991260.1 uncharacterized protein At5g01610-like [Cucurbita maxima]1.4e-6784.81Show/hide
Query:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS
        MSFSKLMASLL LAF+SFSS  VSAQKALTAYDI+QQYGFPVGILP+GVTGYEL+R TG FSLFL+QKCKF I+SYELEYK TI GVISQGR+ KLKGVS
Subjt:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS

Query:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS
        VKI++LWLSIVEVV+DG++L FSVGIASANFP+DSFYESPQCGCGFDC+KVGSLVSAS
Subjt:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS

XP_038898643.1 uncharacterized protein LOC120086187 [Benincasa hispida]8.6e-7390.68Show/hide
Query:  MSFSKLMAS---LLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLK
        M+FSKLMAS   LLLLAF+SFSS  VSAQK LTAYDILQQYGFPVGILP+GV GYELNRATGEFSLFLNQKCKFKIESYELEYKST++GVISQGRIRKLK
Subjt:  MSFSKLMAS---LLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLK

Query:  GVSVKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS
        GVSVKIVLLWLSIVEVVNDG+DLQFSVGIASANFPLDSFYESP+CGCGFDCDK GSLVSAS
Subjt:  GVSVKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS

TrEMBL top hitse value%identityAlignment
A0A1S3BSV3 uncharacterized protein LOC1034928013.6e-6987.42Show/hide
Query:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS
        MSFSKL+ASLLLLA IS S+S +S  K LTAYDILQQYGFPVGILPIG TGYELNRATGEFSL+LNQ+CKFKI+SYELEYKST++GVISQGRIRKLKGVS
Subjt:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS

Query:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDK-VGSLVSAS
        VKIVLLWLSIVEVVNDG+DLQFSVGIASANFPLDSFYESP+CGCGFDCD   GSLVSAS
Subjt:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDK-VGSLVSAS

A0A6J1DLP9 uncharacterized protein At5g01610-like1.2e-6481.13Show/hide
Query:  FSKLMAS---LLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGV
        +SK MAS   LLL AF+SFS+  VSAQKALTAYDILQQYGFPVGILP+GVTGYEL+R TGEFSL+LNQKC+F IESY LEYK TIKGVISQGRIR LKGV
Subjt:  FSKLMAS---LLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGV

Query:  SVKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS
        +VK++LLWL+IVEVVNDG DLQFSVGIASANFP+D FYESPQCGCGFDC K G LV+AS
Subjt:  SVKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS

A0A6J1GP52 uncharacterized protein LOC1114561735.8e-6782.91Show/hide
Query:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS
        MSFSKLMASLL LAF+SFSS  VSAQKALTAYDI+QQYGFPVGILP+GVTGY+L+R TG FSLFL+QKCKF I+SYELEYK T+ GVISQG++ KLKGVS
Subjt:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS

Query:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS
        VKI++LWLSIVEVV+DG++L FSVGIASANFP+DSFYESPQCGCGFDC+KVGSLVSAS
Subjt:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS

A0A6J1H965 uncharacterized protein At5g01610-like7.4e-6276.73Show/hide
Query:  MSFSKLMASLLLLAFISFSS-SFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGV
        MSFSKL+   LLLAFIS SS     AQK+L+AYDILQQYGFPVGILP+GVTGYE N+ATGEFSLFLN+KC+F I+SYELEYK T+KGVISQG I+ LKGV
Subjt:  MSFSKLMASLLLLAFISFSS-SFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGV

Query:  SVKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS
        SVKI+L+W +IVEVV+D ++L+FS+G+ASANFP++SFYESPQCGCGFDCDKVGSLVSAS
Subjt:  SVKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS

A0A6J1JSE0 uncharacterized protein At5g01610-like6.9e-6884.81Show/hide
Query:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS
        MSFSKLMASLL LAF+SFSS  VSAQKALTAYDI+QQYGFPVGILP+GVTGYEL+R TG FSLFL+QKCKF I+SYELEYK TI GVISQGR+ KLKGVS
Subjt:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVS

Query:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS
        VKI++LWLSIVEVV+DG++L FSVGIASANFP+DSFYESPQCGCGFDC+KVGSLVSAS
Subjt:  VKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02813.1 Protein of unknown function, DUF5386.0e-3245.07Show/hide
Query:  MASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVSVKIVLL
        M+  ++   +  +S  VS QK  + Y +L+ Y  P GILP GV  Y+LNR TG F +  N  C+F I+SY+++YK  I G+I++GR+ +L GVSVK++  
Subjt:  MASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVSVKIVLL

Query:  WLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDC
        W++I EV  DG+D++F VG AS  F    F +SP+CGCGF+C
Subjt:  WLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDC

AT1G02816.1 Protein of unknown function, DUF5387.1e-4160.83Show/hide
Query:  TAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIE-SYELEYKSTIKGVISQGRIRKLKGVSVKIVLLWLSIVEVVNDGEDLQFSVGIAS
        TAY +LQ Y FPVGILP GV  Y+L+++TG+F  + N+ C F ++ SY+L+YKSTI G IS+ +I KL GV VK++ LWL+IVEV+ +G++L+FSVGI S
Subjt:  TAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIE-SYELEYKSTIKGVISQGRIRKLKGVSVKIVLLWLSIVEVVNDGEDLQFSVGIAS

Query:  ANFPLDSFYESPQCGCGFDC
        ANF +D FYESPQCGCGFDC
Subjt:  ANFPLDSFYESPQCGCGFDC

AT4G02360.1 Protein of unknown function, DUF5384.6e-4055.8Show/hide
Query:  LLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVSVKIVLLWLSIV
        ++ F+ F+ SF  + +  TAYD ++ Y  P GILP GV  YELN  TG F ++ N  C+F I+SY+L+YKSTI GVIS G ++ LKGVSVK++  W++I 
Subjt:  LLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVSVKIVLLWLSIV

Query:  EVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCD
        EV  DG DL FSVGIASA+FP  +F ESPQCGCGFDC+
Subjt:  EVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCD

AT4G02370.1 Protein of unknown function, DUF5381.6e-3750.69Show/hide
Query:  LMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFK-IESYELEYKSTIKGVISQGRIRKLKGVSVKIV
        L+AS L L+ ++ +    +     TAY +LQ Y FPVGILP GV  Y+L+  TG+F  + N  C F  + SY+L YKSTI G IS+ +++KL GV VK++
Subjt:  LMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFK-IESYELEYKSTIKGVISQGRIRKLKGVSVKIV

Query:  LLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDC
         LWL+IVEV+ +G++++FSVGI SANF +  F ESPQCGCGF+C
Subjt:  LLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDC

AT5G19590.1 Protein of unknown function, DUF5382.2e-1836.11Show/hide
Query:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKI--ESYELEYKSTIKGVISQGRIRKLKG
        M  S  + S+L+L  IS        +K   A+  L  +GFP+G+LP+ V  Y LN+ +G+FSLFLN  CK  +  ++Y   Y + + G ISQG+I +L+G
Subjt:  MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKI--ESYELEYKSTIKGVISQGRIRKLKG

Query:  VSVKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQC
        + V+      SI  + + G++L F V   +A +P  +F ES  C
Subjt:  VSVKIVLLWLSIVEVVNDGEDLQFSVGIASANFPLDSFYESPQC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCTCTAAACTTATGGCTTCTCTTCTTCTCCTTGCTTTCATCTCATTCTCAAGCTCTTTCGTCTCTGCTCAAAAAGCTCTTACCGCCTACGATATTCTCCAACA
GTACGGCTTCCCCGTCGGCATTCTTCCCATCGGGGTAACCGGCTACGAATTGAACAGAGCCACCGGAGAATTTAGCCTCTTCTTGAATCAGAAGTGCAAATTTAAGATCG
AATCGTATGAATTGGAGTACAAATCTACCATCAAGGGCGTGATTTCCCAAGGCAGAATCAGGAAACTGAAAGGTGTTTCTGTTAAGATCGTCCTCCTGTGGCTCAGCATC
GTGGAAGTCGTTAACGATGGTGAGGACCTCCAATTCTCTGTAGGAATTGCCTCTGCCAATTTTCCGCTTGACAGTTTCTATGAGTCGCCGCAGTGTGGATGTGGATTTGA
CTGTGATAAGGTTGGTAGCTTGGTTTCGGCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCTCTAAACTTATGGCTTCTCTTCTTCTCCTTGCTTTCATCTCATTCTCAAGCTCTTTCGTCTCTGCTCAAAAAGCTCTTACCGCCTACGATATTCTCCAACA
GTACGGCTTCCCCGTCGGCATTCTTCCCATCGGGGTAACCGGCTACGAATTGAACAGAGCCACCGGAGAATTTAGCCTCTTCTTGAATCAGAAGTGCAAATTTAAGATCG
AATCGTATGAATTGGAGTACAAATCTACCATCAAGGGCGTGATTTCCCAAGGCAGAATCAGGAAACTGAAAGGTGTTTCTGTTAAGATCGTCCTCCTGTGGCTCAGCATC
GTGGAAGTCGTTAACGATGGTGAGGACCTCCAATTCTCTGTAGGAATTGCCTCTGCCAATTTTCCGCTTGACAGTTTCTATGAGTCGCCGCAGTGTGGATGTGGATTTGA
CTGTGATAAGGTTGGTAGCTTGGTTTCGGCTTCTTGA
Protein sequenceShow/hide protein sequence
MSFSKLMASLLLLAFISFSSSFVSAQKALTAYDILQQYGFPVGILPIGVTGYELNRATGEFSLFLNQKCKFKIESYELEYKSTIKGVISQGRIRKLKGVSVKIVLLWLSI
VEVVNDGEDLQFSVGIASANFPLDSFYESPQCGCGFDCDKVGSLVSAS