; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G024160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionlarge ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic
Genome locationchr02:30783697..30789528
RNA-Seq ExpressionLsi02G024160
SyntenyLsi02G024160
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR003772 - Large ribosomal RNA subunit accumulation protein YceD


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067976.1 uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa]2.3e-16690.34Show/hide
Query:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD
        FKM ATFPTSSVVSSSHS EFI  FY +SKGNVSFNS+FRVPW+FMRNIQPSLG+PCI +KSTSIKCVKPTYQSLFE+NSIITDW DQEGDIEEMGSPW+
Subjt:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD

Query:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS
        GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQISVDVTRK+K+LRLDGIVKTVITLNCYRCCEPAPEC+FSNFS
Subjt:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS

Query:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ
        I+LSEEPIEEPDVIN+G ISGQD+FKT +GNSDEDDEE VDLDDQLYFPPV+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQ
Subjt:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ

Query:  AVKKNDFGPLGNLKRQMQKNS
        AVKKNDFGPLGNLKR+MQ NS
Subjt:  AVKKNDFGPLGNLKRQMQKNS

TYK18147.1 uncharacterized protein E5676_scaffold411G00780 [Cucumis melo var. makuwa]7.5e-16589.72Show/hide
Query:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD
        FKM ATFPTSSVVSSSHS EFI  FY +SKGNVSFNS  R PW+FMRNIQPSLG+PCI +KSTSIKCVKPTYQSLFE+NSIITDW DQEGDIEEMGSPW+
Subjt:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD

Query:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS
        GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQISVDVTRK+K+LRLDGIVKTVITLNCYRCCEPAPEC+FSNFS
Subjt:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS

Query:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ
        I+LSEEPIEEPDVIN+G ISGQD+FKT +GNSDEDDEE VDLDDQLYFPPV+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQ
Subjt:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ

Query:  AVKKNDFGPLGNLKRQMQKNS
        AVKKNDFGPLGNLKR+MQ NS
Subjt:  AVKKNDFGPLGNLKRQMQKNS

XP_008451550.1 PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo]8.9e-16690.03Show/hide
Query:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD
        FKM ATFPTSSVVSSSHS EFI  FY +SKGNVSFNS+FRVPW+FMRNIQPSLG+PCI +KSTSIKCVKPTYQSLFE+NSIITDW DQEGDIEEM SPW+
Subjt:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD

Query:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS
        GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQISVDVTRK+K+LRLDGIVKTVITLNCYRCCEPAPEC+FSNFS
Subjt:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS

Query:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ
        I+LSEEPIEEPDVIN+G ISGQD+FKT +GNSDEDDEE VDLDDQLYFPPV+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQ
Subjt:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ

Query:  AVKKNDFGPLGNLKRQMQKNS
        AVKKNDFGPLGNLKR+MQ NS
Subjt:  AVKKNDFGPLGNLKRQMQKNS

XP_008451552.1 PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo]8.9e-16690.03Show/hide
Query:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD
        FKM ATFPTSSVVSSSHS EFI  FY +SKGNVSFNS+FRVPW+FMRNIQPSLG+PCI +KSTSIKCVKPTYQSLFE+NSIITDW DQEGDIEEM SPW+
Subjt:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD

Query:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS
        GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQISVDVTRK+K+LRLDGIVKTVITLNCYRCCEPAPEC+FSNFS
Subjt:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS

Query:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ
        I+LSEEPIEEPDVIN+G ISGQD+FKT +GNSDEDDEE VDLDDQLYFPPV+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQ
Subjt:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ

Query:  AVKKNDFGPLGNLKRQMQKNS
        AVKKNDFGPLGNLKR+MQ NS
Subjt:  AVKKNDFGPLGNLKRQMQKNS

XP_038897008.1 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like [Benincasa hispida]1.0e-16692.79Show/hide
Query:  MSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWDGA
        MSATFPTSSVVSSSHSNEFIK FYL+SKGNVSF+S+ RVPWKFMRNIQPSLG+ CIMLKSTSIKCVKPTYQSLFE+NSIITDW D +GDIEEMGSPW+GA
Subjt:  MSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWDGA

Query:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFSII
        VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRV K VKDYPFGTPVQISVDVTRKEK+LRLDGIVKTVITLNCYRCCE APEC+FSNFSII
Subjt:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFSII

Query:  LSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAV
        LSEEPIEEPDVIN+G ISGQDMFKTYDGNSDEDDEELVDLDDQLYFP +EKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAV
Subjt:  LSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAV

Query:  KKNDFGPLGNLKRQMQKNS
        KKNDFGPLGNLK+QMQKNS
Subjt:  KKNDFGPLGNLKRQMQKNS

TrEMBL top hitse value%identityAlignment
A0A0A0KAY7 Uncharacterized protein1.2e-16087.46Show/hide
Query:  MSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWDGA
        M ATFPTSSVVSSSHSNEFI  FY +SKG VSF+S+FRVPW+ +RNIQPSLG+PCI +KST+IKCVKPTYQSLFE+NSIITDW DQEGDIEEM SPW+GA
Subjt:  MSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWDGA

Query:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFSII
        +IYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQISVDVTRK K+LRLDGIVKTVITLNCY CCEPAPEC+FSNFSII
Subjt:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFSII

Query:  LSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAV
        LSEEPIEEPDVIN+G ISG+DMFKT +GNSDEDDEEL+DLDDQLYFPP+ KEIDISKNIRDILHLEITMN ICDPGCKG+CLNCGINLNTGSC CSKQAV
Subjt:  LSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAV

Query:  KKNDFGPLGNLKRQMQKNS
        KKNDFGPLG+LKR+MQ NS
Subjt:  KKNDFGPLGNLKRQMQKNS

A0A1S3BR50 uncharacterized protein LOC103492797 isoform X24.3e-16690.03Show/hide
Query:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD
        FKM ATFPTSSVVSSSHS EFI  FY +SKGNVSFNS+FRVPW+FMRNIQPSLG+PCI +KSTSIKCVKPTYQSLFE+NSIITDW DQEGDIEEM SPW+
Subjt:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD

Query:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS
        GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQISVDVTRK+K+LRLDGIVKTVITLNCYRCCEPAPEC+FSNFS
Subjt:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS

Query:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ
        I+LSEEPIEEPDVIN+G ISGQD+FKT +GNSDEDDEE VDLDDQLYFPPV+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQ
Subjt:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ

Query:  AVKKNDFGPLGNLKRQMQKNS
        AVKKNDFGPLGNLKR+MQ NS
Subjt:  AVKKNDFGPLGNLKRQMQKNS

A0A1S3BSU8 uncharacterized protein LOC103492797 isoform X14.3e-16690.03Show/hide
Query:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD
        FKM ATFPTSSVVSSSHS EFI  FY +SKGNVSFNS+FRVPW+FMRNIQPSLG+PCI +KSTSIKCVKPTYQSLFE+NSIITDW DQEGDIEEM SPW+
Subjt:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD

Query:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS
        GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQISVDVTRK+K+LRLDGIVKTVITLNCYRCCEPAPEC+FSNFS
Subjt:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS

Query:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ
        I+LSEEPIEEPDVIN+G ISGQD+FKT +GNSDEDDEE VDLDDQLYFPPV+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQ
Subjt:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ

Query:  AVKKNDFGPLGNLKRQMQKNS
        AVKKNDFGPLGNLKR+MQ NS
Subjt:  AVKKNDFGPLGNLKRQMQKNS

A0A5A7VN29 Uncharacterized protein1.1e-16690.34Show/hide
Query:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD
        FKM ATFPTSSVVSSSHS EFI  FY +SKGNVSFNS+FRVPW+FMRNIQPSLG+PCI +KSTSIKCVKPTYQSLFE+NSIITDW DQEGDIEEMGSPW+
Subjt:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD

Query:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS
        GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQISVDVTRK+K+LRLDGIVKTVITLNCYRCCEPAPEC+FSNFS
Subjt:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS

Query:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ
        I+LSEEPIEEPDVIN+G ISGQD+FKT +GNSDEDDEE VDLDDQLYFPPV+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQ
Subjt:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ

Query:  AVKKNDFGPLGNLKRQMQKNS
        AVKKNDFGPLGNLKR+MQ NS
Subjt:  AVKKNDFGPLGNLKRQMQKNS

A0A5D3D2J4 Uncharacterized protein3.6e-16589.72Show/hide
Query:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD
        FKM ATFPTSSVVSSSHS EFI  FY +SKGNVSFNS  R PW+FMRNIQPSLG+PCI +KSTSIKCVKPTYQSLFE+NSIITDW DQEGDIEEMGSPW+
Subjt:  FKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKPTYQSLFEENSIITDWVDQEGDIEEMGSPWD

Query:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS
        GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQISVDVTRK+K+LRLDGIVKTVITLNCYRCCEPAPEC+FSNFS
Subjt:  GAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVITLNCYRCCEPAPECVFSNFS

Query:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ
        I+LSEEPIEEPDVIN+G ISGQD+FKT +GNSDEDDEE VDLDDQLYFPPV+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQ
Subjt:  IILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQ

Query:  AVKKNDFGPLGNLKRQMQKNS
        AVKKNDFGPLGNLKR+MQ NS
Subjt:  AVKKNDFGPLGNLKRQMQKNS

SwissProt top hitse value%identityAlignment
A0A1D6HQ92 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic8.6e-5551.08Show/hide
Query:  VDQEGDIEEMG--SPWDGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLR--VTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVIT
        V+ E D  + G  SPW+GAV+Y+R+++V H+EY +TLERLGL  LS+  S++RA+ +GL      +    P  TPV +SVDVTR+  RLRLDGIV+TVIT
Subjt:  VDQEGDIEEMG--SPWDGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLR--VTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVIT

Query:  LNCYRCCEPAPECVFSNFSIILSEEPI-EEPDVINIGTISGQDMFK-------TYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNA
        L C+RC EPAP+ +F+NFS++L+E+P+ EEPD   +GTI  +D  K         DG+ D      +D DD+L+FP  +KEIDISK+IRD++HLEIT++A
Subjt:  LNCYRCCEPAPECVFSNFSIILSEEPI-EEPDVINIGTISGQDMFK-------TYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNA

Query:  ICDPGCKGMCLNCGINLN-TGSCNCSKQAVK
        +C+P CKG+CL CG NLN T SC C  + V+
Subjt:  ICDPGCKGMCLNCGINLN-TGSCNCSKQAVK

O81417 Protein SEED AND ROOT HAIR PROTECTIVE PROTEIN5.1e-1544.09Show/hide
Query:  IGIEGIILYKFGSTIAPLQGGLARITCKAVDEYGYEAASYTFLSDSSDENGYFLATLSPSEVEDKRELKECKAFLEVSPLENCQSASDLNNGV
        I +EGII  K G    P+QG  ARI C  VD YG E    + LS  +D  GYF+AT+ PS++   R + +CK +L  SPL +C   +D+N GV
Subjt:  IGIEGIILYKFGSTIAPLQGGLARITCKAVDEYGYEAASYTFLSDSSDENGYFLATLSPSEVEDKRELKECKAFLEVSPLENCQSASDLNNGV

Q9LT27 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic2.6e-8362.35Show/hide
Query:  QSLFEENSIITDWVDQEGDIEEMGSPWDGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRL
        +S  E ++I  DW DQE +IE+ GSPW+G+V+Y+RN+SV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTK VKDYP GTPVQ+SVDV RK+K+LRL
Subjt:  QSLFEENSIITDWVDQEGDIEEMGSPWDGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRL

Query:  DGIVKTVITLNCYRCCEPAPECVFSNFSIILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMN
        DGIV+TVITL C RC E   E +FSNFS++L+EEP+EEPDVI++G   G D  K    + D++D+  +D +D+L+FPP  KEIDISK+IRD++HLEIT+ 
Subjt:  DGIVKTVITLNCYRCCEPAPECVFSNFSIILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMN

Query:  AICDPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRQMQK
        AICD  CKGMCL CG NLN   C+C ++  K   +GPLGNL+ QMQ+
Subjt:  AICDPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRQMQK

Arabidopsis top hitse value%identityAlignment
AT2G47540.1 Pollen Ole e 1 allergen and extensin family protein1.5e-2552.38Show/hide
Query:  EEMLLSTMIGIEGIILYKFGSTIAPLQGGLARITCKAVDEYGYEAASYTFLSDSSDENGYFLATLSPSEVEDKR---ELKECKAFLEVSPLENCQSASDL
        E  LLS+MIG++G+I  K GS + P+QG +AR+TC+  DEYGYEA   T LS ++D  GYFLATLS SEV+D +   ++KEC+AFLE+SP + C   +++
Subjt:  EEMLLSTMIGIEGIILYKFGSTIAPLQGGLARITCKAVDEYGYEAASYTFLSDSSDENGYFLATLSPSEVEDKR---ELKECKAFLEVSPLENCQSASDL

Query:  NNGVS
        N G+S
Subjt:  NNGVS

AT3G19810.1 Protein of unknown function (DUF177)1.8e-8462.35Show/hide
Query:  QSLFEENSIITDWVDQEGDIEEMGSPWDGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRL
        +S  E ++I  DW DQE +IE+ GSPW+G+V+Y+RN+SV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTK VKDYP GTPVQ+SVDV RK+K+LRL
Subjt:  QSLFEENSIITDWVDQEGDIEEMGSPWDGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRL

Query:  DGIVKTVITLNCYRCCEPAPECVFSNFSIILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMN
        DGIV+TVITL C RC E   E +FSNFS++L+EEP+EEPDVI++G   G D  K    + D++D+  +D +D+L+FPP  KEIDISK+IRD++HLEIT+ 
Subjt:  DGIVKTVITLNCYRCCEPAPECVFSNFSIILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMN

Query:  AICDPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRQMQK
        AICD  CKGMCL CG NLN   C+C ++  K   +GPLGNL+ QMQ+
Subjt:  AICDPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRQMQK

AT4G02270.1 root hair specific 133.6e-1644.09Show/hide
Query:  IGIEGIILYKFGSTIAPLQGGLARITCKAVDEYGYEAASYTFLSDSSDENGYFLATLSPSEVEDKRELKECKAFLEVSPLENCQSASDLNNGV
        I +EGII  K G    P+QG  ARI C  VD YG E    + LS  +D  GYF+AT+ PS++   R + +CK +L  SPL +C   +D+N GV
Subjt:  IGIEGIILYKFGSTIAPLQGGLARITCKAVDEYGYEAASYTFLSDSSDENGYFLATLSPSEVEDKRELKECKAFLEVSPLENCQSASDLNNGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTGTTCTCAAGTTCTTGAAAATGGCTTCTCTACATGCAGTTTTCTTGTCATTTTTGGTCATTATTGGTTCAGCTAGTAGTGATAACAATGGTGGTGGGTCTAA
TTATGATCTTATGACACCCAAATTGGGTAAGGAAGAAATGCTTCTCTCTACCATGATTGGTATTGAAGGAATTATTCTTTACAAATTTGGCTCAACAATTGCCCCTCTTC
AAGGTGGTTTGGCAAGAATCACATGTAAAGCAGTGGATGAGTATGGGTATGAGGCAGCTTCTTACACATTTTTAAGTGATTCAAGTGATGAAAATGGGTACTTCTTAGCA
ACACTATCTCCTTCAGAGGTAGAAGACAAGAGGGAGTTGAAGGAATGCAAAGCTTTTTTAGAGGTCTCACCATTAGAGAACTGTCAATCTGCTTCTGATCTCAACAATGG
AGTCTCTGTATTTAAGATGTCAGCCACATTCCCCACATCATCCGTAGTTTCATCTTCTCATTCCAACGAATTTATTAAGGATTTCTATTTGCAATCCAAAGGGAATGTTT
CTTTCAATTCGTATTTCCGAGTTCCATGGAAATTTATGAGAAATATTCAGCCAAGCTTGGGTAACCCATGTATTATGCTGAAATCTACTTCCATAAAGTGTGTGAAACCT
ACTTATCAATCCCTTTTTGAAGAAAATTCAATAATTACTGATTGGGTGGATCAAGAAGGGGATATTGAGGAGATGGGCTCACCTTGGGATGGAGCAGTTATTTACAAGAG
GAACTCTTCAGTTTCTCATGTGGAGTATTGCACAACATTAGAGAGGCTTGGATTGGAGAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCGAAGATGGGTCTACGCG
TAACGAAGGCTGTGAAAGATTATCCCTTTGGAACGCCTGTTCAAATCTCTGTTGATGTTACAAGGAAAGAAAAAAGGTTGAGGCTGGATGGGATAGTTAAGACTGTCATC
ACTCTCAATTGTTATAGGTGTTGTGAACCTGCTCCTGAATGCGTTTTCTCAAATTTCTCCATTATACTAAGCGAAGAACCGATTGAAGAACCTGATGTCATAAATATAGG
AACCATTAGCGGGCAGGATATGTTCAAGACATATGATGGAAATAGTGATGAAGATGATGAAGAGTTGGTTGATTTGGATGATCAACTCTATTTTCCTCCTGTGGAGAAAG
AAATAGATATATCAAAGAACATCAGAGACATCTTGCATCTGGAAATTACTATGAATGCGATATGTGATCCGGGATGCAAAGGCATGTGTCTGAATTGTGGCATAAATTTG
AATACTGGAAGCTGTAACTGTAGTAAGCAGGCTGTAAAGAAAAATGATTTTGGTCCTCTTGGAAATTTGAAAAGGCAAATGCAGAAAAATTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTGTTCTCAAGTTCTTGAAAATGGCTTCTCTACATGCAGTTTTCTTGTCATTTTTGGTCATTATTGGTTCAGCTAGTAGTGATAACAATGGTGGTGGGTCTAA
TTATGATCTTATGACACCCAAATTGGGTAAGGAAGAAATGCTTCTCTCTACCATGATTGGTATTGAAGGAATTATTCTTTACAAATTTGGCTCAACAATTGCCCCTCTTC
AAGGTGGTTTGGCAAGAATCACATGTAAAGCAGTGGATGAGTATGGGTATGAGGCAGCTTCTTACACATTTTTAAGTGATTCAAGTGATGAAAATGGGTACTTCTTAGCA
ACACTATCTCCTTCAGAGGTAGAAGACAAGAGGGAGTTGAAGGAATGCAAAGCTTTTTTAGAGGTCTCACCATTAGAGAACTGTCAATCTGCTTCTGATCTCAACAATGG
AGTCTCTGTATTTAAGATGTCAGCCACATTCCCCACATCATCCGTAGTTTCATCTTCTCATTCCAACGAATTTATTAAGGATTTCTATTTGCAATCCAAAGGGAATGTTT
CTTTCAATTCGTATTTCCGAGTTCCATGGAAATTTATGAGAAATATTCAGCCAAGCTTGGGTAACCCATGTATTATGCTGAAATCTACTTCCATAAAGTGTGTGAAACCT
ACTTATCAATCCCTTTTTGAAGAAAATTCAATAATTACTGATTGGGTGGATCAAGAAGGGGATATTGAGGAGATGGGCTCACCTTGGGATGGAGCAGTTATTTACAAGAG
GAACTCTTCAGTTTCTCATGTGGAGTATTGCACAACATTAGAGAGGCTTGGATTGGAGAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCGAAGATGGGTCTACGCG
TAACGAAGGCTGTGAAAGATTATCCCTTTGGAACGCCTGTTCAAATCTCTGTTGATGTTACAAGGAAAGAAAAAAGGTTGAGGCTGGATGGGATAGTTAAGACTGTCATC
ACTCTCAATTGTTATAGGTGTTGTGAACCTGCTCCTGAATGCGTTTTCTCAAATTTCTCCATTATACTAAGCGAAGAACCGATTGAAGAACCTGATGTCATAAATATAGG
AACCATTAGCGGGCAGGATATGTTCAAGACATATGATGGAAATAGTGATGAAGATGATGAAGAGTTGGTTGATTTGGATGATCAACTCTATTTTCCTCCTGTGGAGAAAG
AAATAGATATATCAAAGAACATCAGAGACATCTTGCATCTGGAAATTACTATGAATGCGATATGTGATCCGGGATGCAAAGGCATGTGTCTGAATTGTGGCATAAATTTG
AATACTGGAAGCTGTAACTGTAGTAAGCAGGCTGTAAAGAAAAATGATTTTGGTCCTCTTGGAAATTTGAAAAGGCAAATGCAGAAAAATTCGTAAGACTTGAATGCAAG
AACATGTGTTCCTTTTGATCAAACCCTGTCTTTCTAATGTGTCTTATCTTGGCTGAGCTCTTTTACAACCATCATTTTGTAATCTTATTCCATCTGCATTTTAACCTTTG
TTACGTTAGAGCACCTGCAATGCAATACTGAAAAAAAAATGTCTGTTGTTACTCTGCTCATTTGCCTGAACCCCCTAAATCTCCAGTTTCTAATTGCAGTTTCTTAATTT
TGATTG
Protein sequenceShow/hide protein sequence
MAAVLKFLKMASLHAVFLSFLVIIGSASSDNNGGGSNYDLMTPKLGKEEMLLSTMIGIEGIILYKFGSTIAPLQGGLARITCKAVDEYGYEAASYTFLSDSSDENGYFLA
TLSPSEVEDKRELKECKAFLEVSPLENCQSASDLNNGVSVFKMSATFPTSSVVSSSHSNEFIKDFYLQSKGNVSFNSYFRVPWKFMRNIQPSLGNPCIMLKSTSIKCVKP
TYQSLFEENSIITDWVDQEGDIEEMGSPWDGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISVDVTRKEKRLRLDGIVKTVI
TLNCYRCCEPAPECVFSNFSIILSEEPIEEPDVINIGTISGQDMFKTYDGNSDEDDEELVDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINL
NTGSCNCSKQAVKKNDFGPLGNLKRQMQKNS