; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G024180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024180
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:30794917..30796978
RNA-Seq ExpressionLsi02G024180
SyntenyLsi02G024180
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575810.1 hypothetical protein SDJN03_26449, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2649Show/hide
Query:  VENNSVSQLVAW-CGAFAFACSLVLASTFKRSKKIISPKK-SQDRDSDLDVGGFRESTTQDADEKARKMEGLQLLLDQSSSSDIISRSCHTTWKTLVKYT
        + ++S+S+ V W  GAF F C L + STFK SKKII+P K  QD DS+L+V GFRES ++  +E  R+ + LQ    QSSS+D+IS SCHTT + LVKY+
Subjt:  VENNSVSQLVAW-CGAFAFACSLVLASTFKRSKKIISPKK-SQDRDSDLDVGGFRESTTQDADEKARKMEGLQLLLDQSSSSDIISRSCHTTWKTLVKYT

Query:  SIEDSE-DENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDE-TWLAEWKYKPSTSTSSSSSSTSSEETSSSG
         +EDS  DE + LTT+ I  K ++EN+VV  YEEEEY +S+KS+E E            ESFSS+ FDE TWL  W  K S+S+SSSS      + + SG
Subjt:  SIEDSE-DENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDE-TWLAEWKYKPSTSTSSSSSSTSSEETSSSG

XP_008451548.1 PREDICTED: uncharacterized protein LOC103492795 [Cucumis melo]1.7e-5460.15Show/hide
Query:  MLSDQEKSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKI-ISPKKSQDRDSDLDVGGFRESTTQDADEKARKMEGLQ
        M  D EKSSFHLERP+ P NKK+ E+  VENN V +LV W GAF F C L++ASTFK+SKKI  SPK+S++ DSDLDV          AD+KA++MEGL+
Subjt:  MLSDQEKSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKI-ISPKKSQDRDSDLDVGGFRESTTQDADEKARKMEGLQ

Query:  LLLDQSSSSDIISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKK-EDENIVVIIYEEEEYPNSK-KSIETETKKYDEISSKFAESFSSKA-FDETW
        L+L  SSS+DIIS  CHT+ K L    SIEDSE EN P+TTE IL KK ++ENIVVIIYEEEEY NS+  SIE  T+KYDE SS  A+SF S A FDE  
Subjt:  LLLDQSSSSDIISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKK-EDENIVVIIYEEEEYPNSK-KSIETETKKYDEISSKFAESFSSKA-FDETW

Query:  LAEWKYKPSTSTSSSS------SSTSSEETSSSGILLQEIDGDDKNIDIVIYIDDDDEDGEDKHVH
          + K   STS+SSSS      SST SEETSS+G+L QEI+ DDKNIDI+IYID DDE+ E +H H
Subjt:  LAEWKYKPSTSTSSSS------SSTSSEETSSSGILLQEIDGDDKNIDIVIYIDDDDEDGEDKHVH

XP_022953717.1 uncharacterized protein LOC111456164 [Cucurbita moschata]8.1e-2850.73Show/hide
Query:  VENNSVSQLVAW-CGAFAFACSLVLASTFKRSKKIISPKKS-QDRDSDLDVGGFRESTTQDADEKARKMEGLQLLLDQSSSSDIISRSCHTTWKTLVKYT
        + ++S+S+ V W  GAF F C L + STFK SKKII+P K+ QD DS+L+V GFRES T+  DE  R+ + LQ    QSSS+D+IS SCHTT + LVKY+
Subjt:  VENNSVSQLVAW-CGAFAFACSLVLASTFKRSKKIISPKKS-QDRDSDLDVGGFRESTTQDADEKARKMEGLQLLLDQSSSSDIISRSCHTTWKTLVKYT

Query:  SIEDSE-DENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDE-TWLAEWKYKPSTSTSSSSSSTSSEETSSSG
         +EDS  DE + LTT+ I  K ++EN+VV  YEEEEY +S+KS+E E           AESFSS+ FDE TWL  W  K  +S+ S +SS+S EE SS G
Subjt:  SIEDSE-DENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDE-TWLAEWKYKPSTSTSSSSSSTSSEETSSSG

Query:  ILLQE
        +   E
Subjt:  ILLQE

XP_031744420.1 putative uncharacterized protein DDB_G0281733 [Cucumis sativus]2.5e-6163.08Show/hide
Query:  KSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKIISPKKSQDRDSDLDV-GGFRESTTQDADEKARKMEGLQLLLDQS
        KSSFHLERPD PANKK+ E+  VEN  V +LV W GAF F C L++ASTFK+SKK ISPK  ++  S+LDV GGF+ES+T+D D+KARKMEGL+L+L  S
Subjt:  KSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKIISPKKSQDRDSDLDV-GGFRESTTQDADEKARKMEGLQLLLDQS

Query:  SSSDIISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKA-FDETWLAEWKYKP
        SS+DIIS  CHT+ K  +   SIEDS DEN  LTTEPIL KKE++NIV+IIYEEEEY NS++S ET T+KYDE SS+  +SF S A FDE    + K +P
Subjt:  SSSDIISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKA-FDETWLAEWKYKP

Query:  S---------TSTSSSSSSTSSEETSSSGI-LLQEIDGDDKNIDIVIYIDDDDEDGEDKH
        S         +S+SSSSSS+SSEETSSSG+ L QEIDGDD NIDI+IYI DDDE+ EDKH
Subjt:  S---------TSTSSSSSSTSSEETSSSGI-LLQEIDGDDKNIDIVIYIDDDDEDGEDKH

XP_038899634.1 uncharacterized G-patch domain protein DDB_G0278987-like [Benincasa hispida]8.0e-7668.08Show/hide
Query:  MLSDQEKSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKIISPKK-SQDRDSDLDVGGFRESTTQDADEKARKMEGLQ
        M SDQEKSSFH + P T  NKKH   RI+EN+ V ++ AW GAFAFACSLVLASTFKRSKKIISPK+ SQD DSDLDVG          D+KAR+MEGLQ
Subjt:  MLSDQEKSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKIISPKK-SQDRDSDLDVGGFRESTTQDADEKARKMEGLQ

Query:  LLLDQSSSSDIISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDETWLAE
        LLL QSSS+DII+RSCHTT    VKYTSIEDS++ENRPL TE IL KK++ENIVV+IYEE EYPNS++ IE E +KY+E SSK  +SF S  FD+TWL E
Subjt:  LLLDQSSSSDIISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDETWLAE

Query:  WKYKPSTSTSSSSSSTSSEETS-SSGILLQEIDGDDKNIDIVIYIDDDDEDGEDKHVHRI
        W Y+PSTS+SSSSSS+SSEETS S G+  QEIDGDDK++DIVIYIDDD+E+GED+   R+
Subjt:  WKYKPSTSTSSSSSSTSSEETS-SSGILLQEIDGDDKNIDIVIYIDDDDEDGEDKHVHRI

TrEMBL top hitse value%identityAlignment
A0A0A0K656 Uncharacterized protein1.2e-4861.26Show/hide
Query:  KSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKIISPKKSQDRDSDLDV-GGFRESTTQDADEKARKMEGLQLLLDQS
        KSSFHLERPD PANKK+ E+  VEN  V +LV W GAF F C L++ASTFK+SKK ISPK  ++  S+LDV GGF+ES+T+D D+KARKMEGL+L+L  S
Subjt:  KSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKIISPKKSQDRDSDLDV-GGFRESTTQDADEKARKMEGLQLLLDQS

Query:  SSSDIISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKA-FDETWLAEWKYKP
        SS+DIIS  CHT+ K  +   SIEDS DEN  LTTEPIL KKE++NIV+IIYEEEEY NS++S ET T+KYDE SS+  +SF S A FDE    + K +P
Subjt:  SSSDIISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKA-FDETWLAEWKYKP

Query:  STSTSSSSSSTSSEETSSSGIL
        S STSSSSS  SS + S   I+
Subjt:  STSTSSSSSSTSSEETSSSGIL

A0A1S3BRP4 uncharacterized protein LOC1034927958.4e-5560.15Show/hide
Query:  MLSDQEKSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKI-ISPKKSQDRDSDLDVGGFRESTTQDADEKARKMEGLQ
        M  D EKSSFHLERP+ P NKK+ E+  VENN V +LV W GAF F C L++ASTFK+SKKI  SPK+S++ DSDLDV          AD+KA++MEGL+
Subjt:  MLSDQEKSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKI-ISPKKSQDRDSDLDVGGFRESTTQDADEKARKMEGLQ

Query:  LLLDQSSSSDIISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKK-EDENIVVIIYEEEEYPNSK-KSIETETKKYDEISSKFAESFSSKA-FDETW
        L+L  SSS+DIIS  CHT+ K L    SIEDSE EN P+TTE IL KK ++ENIVVIIYEEEEY NS+  SIE  T+KYDE SS  A+SF S A FDE  
Subjt:  LLLDQSSSSDIISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKK-EDENIVVIIYEEEEYPNSK-KSIETETKKYDEISSKFAESFSSKA-FDETW

Query:  LAEWKYKPSTSTSSSS------SSTSSEETSSSGILLQEIDGDDKNIDIVIYIDDDDEDGEDKHVH
          + K   STS+SSSS      SST SEETSS+G+L QEI+ DDKNIDI+IYID DDE+ E +H H
Subjt:  LAEWKYKPSTSTSSSS------SSTSSEETSSSGILLQEIDGDDKNIDIVIYIDDDDEDGEDKHVH

A0A5A7VKM4 Uncharacterized protein1.6e-2159.48Show/hide
Query:  MLSDQEKSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKI-ISPKKSQDRDSDLDVGGFRESTTQDADEKARKMEGLQ
        M  D EKSSFHLERP+ P NKK  E+  VENN V +LV W GAF F C L++ASTFK+SKKI  SPK+S++ DSDLDV          AD+KA++MEGL+
Subjt:  MLSDQEKSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKI-ISPKKSQDRDSDLDVGGFRESTTQDADEKARKMEGLQ

Query:  LLLDQSSSSDIISRSC
        LLL  SSS+DIIS  C
Subjt:  LLLDQSSSSDIISRSC

A0A6J1GP08 uncharacterized protein LOC1114561643.9e-2850.73Show/hide
Query:  VENNSVSQLVAW-CGAFAFACSLVLASTFKRSKKIISPKKS-QDRDSDLDVGGFRESTTQDADEKARKMEGLQLLLDQSSSSDIISRSCHTTWKTLVKYT
        + ++S+S+ V W  GAF F C L + STFK SKKII+P K+ QD DS+L+V GFRES T+  DE  R+ + LQ    QSSS+D+IS SCHTT + LVKY+
Subjt:  VENNSVSQLVAW-CGAFAFACSLVLASTFKRSKKIISPKKS-QDRDSDLDVGGFRESTTQDADEKARKMEGLQLLLDQSSSSDIISRSCHTTWKTLVKYT

Query:  SIEDSE-DENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDE-TWLAEWKYKPSTSTSSSSSSTSSEETSSSG
         +EDS  DE + LTT+ I  K ++EN+VV  YEEEEY +S+KS+E E           AESFSS+ FDE TWL  W  K  +S+ S +SS+S EE SS G
Subjt:  SIEDSE-DENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDE-TWLAEWKYKPSTSTSSSSSSTSSEETSSSG

Query:  ILLQE
        +   E
Subjt:  ILLQE

A0A6J1JQ73 uncharacterized protein LOC1114879562.2e-2347.55Show/hide
Query:  VENNSVSQLVAW-CGAFAFACSLVLASTFKRSKKII-SPKKSQDRDSDLDVGGFRESTTQDADEKARKMEGLQLLLDQSSSSDIISRSCHTTWKTLVKYT
        + ++ +S+ V W  G F FAC LV+ STFK SKKII SPK  +D DS+LDV  F ES T+  DE+ R+ +  Q    QSSS+D+IS SC+ T + LVKY+
Subjt:  VENNSVSQLVAW-CGAFAFACSLVLASTFKRSKKII-SPKKSQDRDSDLDVGGFRESTTQDADEKARKMEGLQLLLDQSSSSDIISRSCHTTWKTLVKYT

Query:  SIEDSE-DENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDE-TWLAEWKYKPS----TSTSSSSSSTSSEET
         +EDS  DE + LTT+ I  K ++ENIVV  YEEEEY +S+KS+E          +  AESFSS+ FDE TWL  W  K S    TS+SS   + S ++ 
Subjt:  SIEDSE-DENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDE-TWLAEWKYKPS----TSTSSSSSSTSSEET

Query:  SSSG
          SG
Subjt:  SSSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTCCGACCAAGAAAAATCAAGCTTTCACCTCGAGAGACCAGACACACCGGCCAACAAGAAGCATGCCGAGATGCGTATTGTCGAAAACAACAGCGTATCGCAGTT
GGTCGCATGGTGTGGAGCCTTTGCTTTCGCTTGTTCACTTGTATTAGCTTCTACATTCAAGAGGAGCAAGAAGATAATATCCCCTAAAAAGAGTCAAGACCGTGATTCGG
ATCTTGACGTCGGTGGTTTCAGAGAAAGTACTACCCAAGACGCCGACGAGAAAGCTCGAAAAATGGAAGGACTGCAACTTCTTCTTGATCAGTCTTCATCAAGTGATATC
ATCAGTCGTTCATGCCACACGACGTGGAAAACATTGGTGAAATATACTTCAATAGAAGACTCCGAAGACGAAAATCGACCTCTAACGACGGAACCCATCTTAGTAAAGAA
AGAGGACGAAAATATTGTGGTTATTATTTATGAAGAAGAAGAGTACCCAAATTCAAAAAAATCTATAGAAACCGAAACCAAAAAATATGACGAAATTAGCTCAAAATTTG
CAGAAAGTTTTTCATCTAAAGCATTTGATGAAACTTGGCTTGCAGAGTGGAAATATAAACCATCAACATCAACATCATCTTCCTCGTCCTCGACCTCGTCAGAAGAAACT
TCATCTAGTGGAATTCTTTTGCAAGAGATCGATGGAGATGACAAAAATATCGATATCGTTATATATATTGATGACGACGATGAGGATGGTGAAGACAAACATGTTCACAG
AATCTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAGGTCTCCTCCCACTTCTCCTTCCCCAACCGATCATATCAATGCTGTCCGACCAAGAAAAATCAAGCTTTCACCTCGAGAGACCAGACACACCGGCCAACAAGAAG
CATGCCGAGATGCGTATTGTCGAAAACAACAGCGTATCGCAGTTGGTCGCATGGTGTGGAGCCTTTGCTTTCGCTTGTTCACTTGTATTAGCTTCTACATTCAAGAGGAG
CAAGAAGATAATATCCCCTAAAAAGAGTCAAGACCGTGATTCGGATCTTGACGTCGGTGGTTTCAGAGAAAGTACTACCCAAGACGCCGACGAGAAAGCTCGAAAAATGG
AAGGACTGCAACTTCTTCTTGATCAGTCTTCATCAAGTGATATCATCAGTCGTTCATGCCACACGACGTGGAAAACATTGGTGAAATATACTTCAATAGAAGACTCCGAA
GACGAAAATCGACCTCTAACGACGGAACCCATCTTAGTAAAGAAAGAGGACGAAAATATTGTGGTTATTATTTATGAAGAAGAAGAGTACCCAAATTCAAAAAAATCTAT
AGAAACCGAAACCAAAAAATATGACGAAATTAGCTCAAAATTTGCAGAAAGTTTTTCATCTAAAGCATTTGATGAAACTTGGCTTGCAGAGTGGAAATATAAACCATCAA
CATCAACATCATCTTCCTCGTCCTCGACCTCGTCAGAAGAAACTTCATCTAGTGGAATTCTTTTGCAAGAGATCGATGGAGATGACAAAAATATCGATATCGTTATATAT
ATTGATGACGACGATGAGGATGGTGAAGACAAACATGTTCACAGAATCTAGATTCTGATTTATGTTTATATTTGGTAAAAAAGAAAAAGAACTATTTTGATCTCATCTAT
ATGGGTTTGTTTTAGTTGTTTTTTAGTCCATTTTAGTTGTTATATTTGGAAGATATTCAAATTTAATTGAGTCACTGTATTATTATTTTCATTGAATCTTAATAACACAG
TTCTCCT
Protein sequenceShow/hide protein sequence
MLSDQEKSSFHLERPDTPANKKHAEMRIVENNSVSQLVAWCGAFAFACSLVLASTFKRSKKIISPKKSQDRDSDLDVGGFRESTTQDADEKARKMEGLQLLLDQSSSSDI
ISRSCHTTWKTLVKYTSIEDSEDENRPLTTEPILVKKEDENIVVIIYEEEEYPNSKKSIETETKKYDEISSKFAESFSSKAFDETWLAEWKYKPSTSTSSSSSSTSSEET
SSSGILLQEIDGDDKNIDIVIYIDDDDEDGEDKHVHRI