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Lsi02G024230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionKeratin, type I cytoskeletal 9-like
Genome locationchr02:30835968..30836405
RNA-Seq ExpressionLsi02G024230
SyntenyLsi02G024230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]4.3e-1039.58Show/hide
Query:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-------DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLF
        M RG KLF TL LV AW+Y    +VGAT  F+D TG  +          +FG   +G   N        VK     E    IAPVGL+T +NK+ +A  +
Subjt:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-------DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLF

Query:  DLEITNKIKGGAVVFNGHEIISLKSSANIIPLSHGEITSRKIKG
        DL+I  +IKGG  + N HE  S  ++   I  SHG   S K KG
Subjt:  DLEITNKIKGGAVVFNGHEIISLKSSANIIPLSHGEITSRKIKG

KAA0067982.1 keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa]8.0e-1747.97Show/hide
Query:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLFDLEITN
        M RG KLFH + LV +WQY  K+      +F DVTGFFD D GSFGSGGVGIL +TK+  +           AP+IAP   +   NKDDEAS FD E T 
Subjt:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLFDLEITN

Query:  KIKGGAVVFNGHEIISLKSSANI
         I GG    N +  I+LK S  +
Subjt:  KIKGGAVVFNGHEIISLKSSANI

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]4.3e-1042.07Show/hide
Query:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-------DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLF
        MARG  LF TL LV AW+Y    +VGAT  FSD TG  +          +FG   +G   N        V+     E    IAPVGLET +NK+D+   +
Subjt:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-------DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLF

Query:  DLEITNKIK-GGAVVFNGHEIISLKSSANIIPLSHGEITSRKIKG
        DL+I  +IK GGAVV + HE  S  +S   I  SHG   S K KG
Subjt:  DLEITNKIK-GGAVVFNGHEIISLKSSANIIPLSHGEITSRKIKG

TYK18141.1 keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa]4.7e-1749.59Show/hide
Query:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLFDLEITN
        M RG KLFH + LV +WQY  K+      +F DVTGFFD D GSFGSGGVGIL +TK       K  S    AP+IAP   +   NKDDEAS FD E T 
Subjt:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLFDLEITN

Query:  KIKGGAVVFNGHEIISLKSSANI
         I GG    N +  I+LK S  +
Subjt:  KIKGGAVVFNGHEIISLKSSANI

XP_031745100.1 cell wall protein IFF6 [Cucumis sativus]1.5e-1848.84Show/hide
Query:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDE-ASLFDLEIT
        +A G KLFHT+ L+LAWQY AK+      +F DVTGFFD +LGSFGSGG GI+  TK+  +P     +  E+AP IAPVG +TP N +D  AS FD + +
Subjt:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDE-ASLFDLEIT

Query:  NKIKGGAVVFNGHEIISLKSSANIIPLSH
          I GG  + NG   ++LK S   + LSH
Subjt:  NKIKGGAVVFNGHEIISLKSSANIIPLSH

TrEMBL top hitse value%identityAlignment
A0A0A0K5G8 Uncharacterized protein7.1e-1948.84Show/hide
Query:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDE-ASLFDLEIT
        +A G KLFHT+ L+LAWQY AK+      +F DVTGFFD +LGSFGSGG GI+  TK+  +P     +  E+AP IAPVG +TP N +D  AS FD + +
Subjt:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDE-ASLFDLEIT

Query:  NKIKGGAVVFNGHEIISLKSSANIIPLSH
          I GG  + NG   ++LK S   + LSH
Subjt:  NKIKGGAVVFNGHEIISLKSSANIIPLSH

A0A0A0K5J0 Uncharacterized protein4.7e-1548.34Show/hide
Query:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLG------SFGSGGVGILKNTKDDTAPNVKTTSPLELAPT-IAPVGLETPMNKDDEASL
        MARG KLF TLFLV AWQ+   +KV AT  F+DVTG  + DL        FG   +G   NT    A  V   +    APT IAPVGL+TP+NK D+ S 
Subjt:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLG------SFGSGGVGILKNTKDDTAPNVKTTSPLELAPT-IAPVGLETPMNKDDEASL

Query:  FDLEITNKIKGGAVVFNGHEIISLKSSANIIPLSHGEITSRKIKGGAEFDL
        F LEI  +I+ G VV   HE I+LKS  N I LSHG   S K KGG    +
Subjt:  FDLEITNKIKGGAVVFNGHEIISLKSSANIIPLSHGEITSRKIKGGAEFDL

A0A0A0K7W7 Uncharacterized protein5.4e-1142.76Show/hide
Query:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-------DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLF
        MARG KLF TL LV AW+Y    +VGAT  FSD TG  +          +FG   +G   +        VK     E    IAPVGLET +NK+D+   +
Subjt:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-------DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLF

Query:  DLEITNKIK-GGAVVFNGHEIISLKSSANIIPLSHGEITSRKIKG
        DL+I  +IK GGAVV + HE  S  +S   I  SHG   S K KG
Subjt:  DLEITNKIK-GGAVVFNGHEIISLKSSANIIPLSHGEITSRKIKG

A0A5A7VI20 Keratin, type I cytoskeletal 9-like3.9e-1747.97Show/hide
Query:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLFDLEITN
        M RG KLFH + LV +WQY  K+      +F DVTGFFD D GSFGSGGVGIL +TK+  +           AP+IAP   +   NKDDEAS FD E T 
Subjt:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLFDLEITN

Query:  KIKGGAVVFNGHEIISLKSSANI
         I GG    N +  I+LK S  +
Subjt:  KIKGGAVVFNGHEIISLKSSANI

A0A5D3D1L6 Keratin, type I cytoskeletal 9-like2.3e-1749.59Show/hide
Query:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLFDLEITN
        M RG KLFH + LV +WQY  K+      +F DVTGFFD D GSFGSGGVGIL +TK       K  S    AP+IAP   +   NKDDEAS FD E T 
Subjt:  MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFD-DLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLFDLEITN

Query:  KIKGGAVVFNGHEIISLKSSANI
         I GG    N +  I+LK S  +
Subjt:  KIKGGAVVFNGHEIISLKSSANI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGAGGTTTGAAGCTGTTCCACACCCTTTTCTTAGTGCTTGCTTGGCAATATTTTGCCAAGCTCAAGGTGGGTGCCACTATCTCTTTCAGTGATGTTACCGGCTT
TTTTGATGACCTCGGTTCATTTGGATCGGGTGGTGTCGGAATTCTTAAGAACACAAAGGATGACACTGCACCAAATGTAAAAACGACGAGCCCTCTGGAATTGGCTCCGA
CTATTGCCCCTGTTGGCCTTGAAACTCCTATGAACAAAGACGACGAAGCTTCGTTGTTTGATCTTGAAATTACTAATAAGATCAAGGGTGGGGCTGTTGTTTTTAATGGT
CATGAAATAATTAGTTTGAAGAGTAGTGCCAATATTATTCCTCTTTCTCATGGTGAAATAACTAGTCGAAAGATAAAAGGTGGTGCTGAATTTGATCTAAGGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGAGGTTTGAAGCTGTTCCACACCCTTTTCTTAGTGCTTGCTTGGCAATATTTTGCCAAGCTCAAGGTGGGTGCCACTATCTCTTTCAGTGATGTTACCGGCTT
TTTTGATGACCTCGGTTCATTTGGATCGGGTGGTGTCGGAATTCTTAAGAACACAAAGGATGACACTGCACCAAATGTAAAAACGACGAGCCCTCTGGAATTGGCTCCGA
CTATTGCCCCTGTTGGCCTTGAAACTCCTATGAACAAAGACGACGAAGCTTCGTTGTTTGATCTTGAAATTACTAATAAGATCAAGGGTGGGGCTGTTGTTTTTAATGGT
CATGAAATAATTAGTTTGAAGAGTAGTGCCAATATTATTCCTCTTTCTCATGGTGAAATAACTAGTCGAAAGATAAAAGGTGGTGCTGAATTTGATCTAAGGAGCTGA
Protein sequenceShow/hide protein sequence
MARGLKLFHTLFLVLAWQYFAKLKVGATISFSDVTGFFDDLGSFGSGGVGILKNTKDDTAPNVKTTSPLELAPTIAPVGLETPMNKDDEASLFDLEITNKIKGGAVVFNG
HEIISLKSSANIIPLSHGEITSRKIKGGAEFDLRS