; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G024240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat protein
Genome locationchr02:30839598..30840029
RNA-Seq ExpressionLsi02G024240
SyntenyLsi02G024240
Gene Ontology termsGO:0030150 - protein import into mitochondrial matrix (biological process)
GO:0005744 - TIM23 mitochondrial import inner membrane translocase complex (cellular component)
GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046647.1 Ankyrin repeat protein [Cucumis melo var. makuwa]4.8e-3058.78Show/hide
Query:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF
        CVKVGATF+DVTGIFGLG NRR+SF +T GSSG+   SNTGG    SVVDIESP QAP TP+I P G+ET+P +K   +  AFVSKDHD HW++G +IA 
Subjt:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF

Query:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLK
        S GG++T    G K  V +NN+   +SR L+
Subjt:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLK
KAA0046651.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.4e-2655.73Show/hide
Query:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF
        CVKVGATF+DVTGI GLG NR +SF +T GSSG+   SNTGG    SVVDIESP QAPT  EI P G+ET+P +K      AFVSKDHD HWK+G +I  
Subjt:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF

Query:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLK
        S GG+++    G +  V +N+N   +SR L+
Subjt:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLK
KAA0048678.1 Ankyrin repeat protein [Cucumis melo var. makuwa]9.0e-2955.47Show/hide
Query:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF
        CVKVGATF+DVTGI GLG + R+SFR+T GSSG+   SNTGG    SVVD ESP QAP TP+I P G+ET+P +K   +  AFVSKDHD HWK+G +IA 
Subjt:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF

Query:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLKVPRARD
        S GGI+T    G K  V +NN+   +S  L+   +R+
Subjt:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLKVPRARD
KGN45513.2 hypothetical protein Csa_023821, partial [Cucumis sativus]1.9e-2655.2Show/hide
Query:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIV-KMREMDAFVSKDHDTHWKNGGDIAF
        CV VGATF+DVTGI GLG + R+SF +T GS G+   SNTGG    SVVDIESPAQAPT+ EI P G+ETDP +    + + F+SKDHD HWK+G +IA 
Subjt:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIV-KMREMDAFVSKDHDTHWKNGGDIAF

Query:  SHGGIITRKTIGTKTDVNNNNNIVI
        SHGG+I   + G K  V + +N  +
Subjt:  SHGGIITRKTIGTKTDVNNNNNIVI
TYK18189.1 Ankyrin repeat protein [Cucumis melo var. makuwa]8.4e-2756.8Show/hide
Query:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF
        CVKVGATF+DVTGI GLG NR +SF +T GSSG+   SNTGG    SVVDIESP QAPT  EI P G+ET+P +K      AFVSKDHD HWK+G +IA 
Subjt:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF

Query:  SHGGIITRKTIGTKTDVNNNNNIVI
        S GG+++    G +  V +N+N  +
Subjt:  SHGGIITRKTIGTKTDVNNNNNIVI
TrEMBL top hitse value%identityAlignment
A0A0A0KB06 Uncharacterized protein9.1e-2755.2Show/hide
Query:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIV-KMREMDAFVSKDHDTHWKNGGDIAF
        CV VGATF+DVTGI GLG + R+SF +T GS G+   SNTGG    SVVDIESPAQAPT+ EI P G+ETDP +    + + F+SKDHD HWK+G +IA 
Subjt:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIV-KMREMDAFVSKDHDTHWKNGGDIAF

Query:  SHGGIITRKTIGTKTDVNNNNNIVI
        SHGG+I   + G K  V + +N  +
Subjt:  SHGGIITRKTIGTKTDVNNNNNIVI
A0A5A7TZ96 Ankyrin repeat protein7.0e-2755.73Show/hide
Query:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF
        CVKVGATF+DVTGI GLG NR +SF +T GSSG+   SNTGG    SVVDIESP QAPT  EI P G+ET+P +K      AFVSKDHD HWK+G +I  
Subjt:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF

Query:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLK
        S GG+++    G +  V +N+N   +SR L+
Subjt:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLK
A0A5A7U0F0 Ankyrin repeat protein4.4e-2955.47Show/hide
Query:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF
        CVKVGATF+DVTGI GLG + R+SFR+T GSSG+   SNTGG    SVVD ESP QAP TP+I P G+ET+P +K   +  AFVSKDHD HWK+G +IA 
Subjt:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF

Query:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLKVPRARD
        S GGI+T    G K  V +NN+   +S  L+   +R+
Subjt:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLKVPRARD
A0A5D3D3H1 Ankyrin repeat protein2.3e-3058.78Show/hide
Query:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF
        CVKVGATF+DVTGIFGLG NRR+SF +T GSSG+   SNTGG    SVVDIESP QAP TP+I P G+ET+P +K   +  AFVSKDHD HW++G +IA 
Subjt:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF

Query:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLK
        S GG++T    G K  V +NN+   +SR L+
Subjt:  SHGGIITRKTIGTKTDVNNNNNIVIISRSLK
A0A5D3D3W7 Ankyrin repeat protein4.1e-2756.8Show/hide
Query:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF
        CVKVGATF+DVTGI GLG NR +SF +T GSSG+   SNTGG    SVVDIESP QAPT  EI P G+ET+P +K      AFVSKDHD HWK+G +IA 
Subjt:  CVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGG---RSVVDIESPAQAPTTPEITPVGVETDPIVK-MREMDAFVSKDHDTHWKNGGDIAF

Query:  SHGGIITRKTIGTKTDVNNNNNIVI
        S GG+++    G +  V +N+N  +
Subjt:  SHGGIITRKTIGTKTDVNNNNNIVI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCTTCGCAATATTATTGTGTGAAGGTGGGTGCCACATTCAACGATGTCACCGGCATATTCGGTCTCGGTTTCAATCGTCGCTTTTCTTTTCGCCATACCACTGG
ATCCAGTGGTATCACGACGCTTTCAAACACCGGTGGTAGGAGCGTCGTAGACATTGAGAGCCCTGCACAAGCACCAACAACACCTGAAATTACCCCTGTTGGAGTTGAAA
CTGATCCAATAGTAAAGATGCGTGAGATGGATGCTTTTGTTTCTAAGGATCATGATACTCATTGGAAGAATGGTGGTGATATTGCTTTTTCTCATGGTGGAATAATTACT
CGAAAGACTATAGGTACTAAAACTGATGTAAACAACAATAACAATATTGTTATTATTTCTCGTAGTCTTAAGGTGCCAAGGGCACGTGACCCTCAGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGCTTCGCAATATTATTGTGTGAAGGTGGGTGCCACATTCAACGATGTCACCGGCATATTCGGTCTCGGTTTCAATCGTCGCTTTTCTTTTCGCCATACCACTGG
ATCCAGTGGTATCACGACGCTTTCAAACACCGGTGGTAGGAGCGTCGTAGACATTGAGAGCCCTGCACAAGCACCAACAACACCTGAAATTACCCCTGTTGGAGTTGAAA
CTGATCCAATAGTAAAGATGCGTGAGATGGATGCTTTTGTTTCTAAGGATCATGATACTCATTGGAAGAATGGTGGTGATATTGCTTTTTCTCATGGTGGAATAATTACT
CGAAAGACTATAGGTACTAAAACTGATGTAAACAACAATAACAATATTGTTATTATTTCTCGTAGTCTTAAGGTGCCAAGGGCACGTGACCCTCAGCTTTAA
Protein sequenceShow/hide protein sequence
MLASQYYCVKVGATFNDVTGIFGLGFNRRFSFRHTTGSSGITTLSNTGGRSVVDIESPAQAPTTPEITPVGVETDPIVKMREMDAFVSKDHDTHWKNGGDIAFSHGGIIT
RKTIGTKTDVNNNNNIVIISRSLKVPRARDPQL