; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G024250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat protein
Genome locationchr02:30842321..30842950
RNA-Seq ExpressionLsi02G024250
SyntenyLsi02G024250
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]7.4e-4855.05Show/hide
Query:  MEIARGFKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF-
        M + RGFKLFQTL LVFAW+ C  +V ATF D TGVV+   NH FSFRAFGWP I T NV D   +STV  QIRAEAP GIAPVGL+T INKE K  S+ 
Subjt:  MEIARGFKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF-

Query:  ---------------GHEINMKSGSNIAFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRKIH
                        HE N+ +G NIAFSHGGK+ +KSKGSV    G  G K NG  + I           NK LSFG++IKK  VASLGLK  + K++
Subjt:  ---------------GHEINMKSGSNIAFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRKIH

Query:  IGVSNGGNISLKKRGSIV
        +GVS GGNIS+ KRGS+V
Subjt:  IGVSNGGNISLKKRGSIV

KAA0048677.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.5e-4353.04Show/hide
Query:  MEIARG-FKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF
        M + RG FKLFQTL LVFAW+ C  +V ATF+D TGVV+   NH FSFRAFGWP I T NV  SI  STV  QIRAEAP GIAPVGLETPINK+DKV S 
Subjt:  MEIARG-FKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF

Query:  G----------------HEINMKSGSNIAFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASL---------
                         HE  + SG NIAFS+ GK+ +KSK SV    G  G K NG  + I + GL        +L FG+EIKK  VASL         
Subjt:  G----------------HEINMKSGSNIAFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASL---------

Query:  --GLKAPKRKIHIGVSNGGNISLKKRGSIV
          G+KA K K+++GVS+GGNIS+ KRGS+V
Subjt:  --GLKAPKRKIHIGVSNGGNISLKKRGSIV

KAA0048678.1 Ankyrin repeat protein [Cucumis melo var. makuwa]8.0e-4253.46Show/hide
Query:  MEIARGFKLFQTLFLVFAWQCFLKVSATFNDATGVVDLAPNHHFSFR-AFGWPRI-VTSNVGDSIASSTVNNQIRAEAPT-GIAPVGLETP---INKEDK
        M   +GFKLF  LFLV A  C +KV ATF+D TG++ L  +H +SFR   G   + + SN G S  SS V+ +   +APT  IAP GLET     N  D 
Subjt:  MEIARGFKLFQTLFLVFAWQCFLKVSATFNDATGVVDLAPNHHFSFR-AFGWPRI-VTSNVGDSIASSTVNNQIRAEAPT-GIAPVGLETP---INKEDK

Query:  VS--SFGHEINMKSGSNIAFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSR-NKALSFGLEIKKQIVASLGLKAPKRKIHIGVSNGGN
        ++  S  H+I+ KSG NIA S GG         +V+ GGK G+KSN N+N  VSHGLET +SR NKALSFG+EI+K  VASLGLKA  RK+H+GVS+GGN
Subjt:  VS--SFGHEINMKSGSNIAFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSR-NKALSFGLEIKKQIVASLGLKAPKRKIHIGVSNGGN

Query:  ISLKKRGSIVSNGGRIG
        IS+KKRGSIVSNG   G
Subjt:  ISLKKRGSIVSNGGRIG

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]2.7e-5867.82Show/hide
Query:  ATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSFG----------------HEINMKSGSNI
        ATFND TGVV+L  NHHFSFR FGWPRI T N   S+A STVNN   AEAPTGIAPVGL+TPINK DKVS+FG                HEIN+KSG NI
Subjt:  ATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSFG----------------HEINMKSGSNI

Query:  AFSHGGKIILKSKG--SVVSKGGKFGLKSNGNNNVIVSHGLETPMSR-NKALSFGLEIKKQIVASLGLKAPKRKIHIGVSNGGNISLKKRGSIVSNGGRI
        A SHGGKI LK KG  SV   GGKFGLKS+G  NV+VSHG ET MS+ NK LSFG+EIKK  VASLGLKAPK K++ GVS+GGNIS+KKRGSIVS GG+I
Subjt:  AFSHGGKIILKSKG--SVVSKGGKFGLKSNGNNNVIVSHGLETPMSR-NKALSFGLEIKKQIVASLGLKAPKRKIHIGVSNGGNISLKKRGSIVSNGGRI

Query:  GV
        G+
Subjt:  GV

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]2.1e-4256Show/hide
Query:  MEIARGFKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF-
        M +ARGF LFQTL LVFAW+ C  +V ATF+DATGVV+   NH FSFRAFGWP I T NV  SI +STV  QIRAEAP GIAPVGLET INKEDKV S+ 
Subjt:  MEIARGFKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF-

Query:  ----------------GHEINMKSGSNIAFSHGGKIILKSKGSVV-SKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRK
                         HE N+ SG NIAFSHGGK+ +KSKGSV  S GG+              +GL+  +   K LSFG+EIKK   A+LGLKA K K
Subjt:  ----------------GHEINMKSGSNIAFSHGGKIILKSKGSVV-SKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRK

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein1.7e-6969.03Show/hide
Query:  IARGFKLFQTLFLVFAWQCFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSFG---
        +ARGFKLFQTLFLVFAWQ  +KV ATFND TGVV+L  NHHFSFR FGWPRI T N   S+A STVNN   AEAPTGIAPVGL+TPINK DKVS+FG   
Subjt:  IARGFKLFQTLFLVFAWQCFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSFG---

Query:  -------------HEINMKSGSNIAFSHGGKIILKSKG--SVVSKGGKFGLKSNGNNNVIVSHGLETPMSR-NKALSFGLEIKKQIVASLGLKAPKRKIH
                     HEIN+KSG NIA SHGGKI LK KG  SV   GGKFGLKS+G  NV+VSHG ET MS+ NK LSFG+EIKK  VASLGLKAPK K++
Subjt:  -------------HEINMKSGSNIAFSHGGKIILKSKG--SVVSKGGKFGLKSNGNNNVIVSHGLETPMSR-NKALSFGLEIKKQIVASLGLKAPKRKIH

Query:  IGVSNGGNISLKKRGSIVSNGGRIGV
         GVS+GGNIS+KKRGSIVS GG+IG+
Subjt:  IGVSNGGNISLKKRGSIVSNGGRIGV

A0A0A0K7W7 Uncharacterized protein1.2e-5157.27Show/hide
Query:  MEIARGFKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF-
        ME+ARGFKLFQTL LVFAW+ C  +V ATF+DATGVV+   NH FSFRAFGWP I T +V  SI +STV  QI AEAP GIAPVGLET INKEDKV S+ 
Subjt:  MEIARGFKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF-

Query:  ----------------GHEINMKSGSNIAFSHGGKIILKSKGSVV-SKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRK
                         HE N+ SG NIAFSHGGK+ +KSKGSV  S GG+              +GL+  +   K LSFG+EIKK   A+LGLKA K K
Subjt:  ----------------GHEINMKSGSNIAFSHGGKIILKSKGSVV-SKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRK

Query:  IHIGVSNGGNISLKKRGSIV
        +++GVS+GGNIS+ KRGSIV
Subjt:  IHIGVSNGGNISLKKRGSIV

A0A0A0KAZ8 Uncharacterized protein7.8e-4356.48Show/hide
Query:  SATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF-----------------GHEINMKSGS
        SATF+DATGVV+   NH FSFRAFGWP I T NV  SI +STV  QIRAEAP GIAPVGLET INKEDKV S+                  HE N+ SG 
Subjt:  SATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF-----------------GHEINMKSGS

Query:  NIAFSHGGKIILKSKGSVV-SKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRKIHIGVSNGGNISLKKRGSI
        NIAFSHGGK+ +KSKGSV  S GG+              +GL+  +   K LSFG+EIKK   A+LGLKA K K+++GVS+GGNIS+ KRGSI
Subjt:  NIAFSHGGKIILKSKGSVV-SKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRKIHIGVSNGGNISLKKRGSI

A0A5A7U057 Ankyrin repeat protein3.6e-4855.05Show/hide
Query:  MEIARGFKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF-
        M + RGFKLFQTL LVFAW+ C  +V ATF D TGVV+   NH FSFRAFGWP I T NV D   +STV  QIRAEAP GIAPVGL+T INKE K  S+ 
Subjt:  MEIARGFKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF-

Query:  ---------------GHEINMKSGSNIAFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRKIH
                        HE N+ +G NIAFSHGGK+ +KSKGSV    G  G K NG  + I           NK LSFG++IKK  VASLGLK  + K++
Subjt:  ---------------GHEINMKSGSNIAFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRKIH

Query:  IGVSNGGNISLKKRGSIV
        +GVS GGNIS+ KRGS+V
Subjt:  IGVSNGGNISLKKRGSIV

A0A5A7U318 Ankyrin repeat protein1.2e-4353.04Show/hide
Query:  MEIARG-FKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF
        M + RG FKLFQTL LVFAW+ C  +V ATF+D TGVV+   NH FSFRAFGWP I T NV  SI  STV  QIRAEAP GIAPVGLETPINK+DKV S 
Subjt:  MEIARG-FKLFQTLFLVFAWQ-CFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSF

Query:  G----------------HEINMKSGSNIAFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASL---------
                         HE  + SG NIAFS+ GK+ +KSK SV    G  G K NG  + I + GL        +L FG+EIKK  VASL         
Subjt:  G----------------HEINMKSGSNIAFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASL---------

Query:  --GLKAPKRKIHIGVSNGGNISLKKRGSIV
          G+KA K K+++GVS+GGNIS+ KRGS+V
Subjt:  --GLKAPKRKIHIGVSNGGNISLKKRGSIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATAGCAAGAGGTTTTAAGCTCTTTCAAACCCTTTTCCTAGTCTTTGCTTGGCAGTGTTTTTTAAAGGTGAGTGCCACTTTCAACGACGCCACCGGTGTCGTAGA
TCTCGCTCCCAACCATCATTTTTCTTTTCGTGCGTTCGGATGGCCTCGAATCGTGACTTCAAATGTTGGTGATAGCATCGCATCATCAACCGTAAACAACCAAATACGTG
CAGAAGCACCAACAGGGATTGCCCCTGTTGGGCTTGAAACTCCAATCAACAAAGAGGACAAAGTTTCGTCTTTTGGCCATGAAATTAATATGAAGAGTGGTAGCAACATT
GCTTTTTCTCATGGTGGCAAAATTATTCTAAAGAGCAAAGGTAGTGTTGTTTCAAAAGGTGGTAAATTTGGTCTAAAGAGCAATGGGAATAATAATGTCATTGTTTCTCA
TGGTCTTGAAACTCCAATGAGTAGAAACAAAGCCTTGTCTTTTGGTCTAGAAATAAAGAAGCAAATTGTTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAAGATTCATA
TTGGTGTTTCTAATGGTGGAAATATTAGTCTAAAGAAGAGAGGTAGTATTGTTTCAAATGGTGGTAGAATTGGTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATAGCAAGAGGTTTTAAGCTCTTTCAAACCCTTTTCCTAGTCTTTGCTTGGCAGTGTTTTTTAAAGGTGAGTGCCACTTTCAACGACGCCACCGGTGTCGTAGA
TCTCGCTCCCAACCATCATTTTTCTTTTCGTGCGTTCGGATGGCCTCGAATCGTGACTTCAAATGTTGGTGATAGCATCGCATCATCAACCGTAAACAACCAAATACGTG
CAGAAGCACCAACAGGGATTGCCCCTGTTGGGCTTGAAACTCCAATCAACAAAGAGGACAAAGTTTCGTCTTTTGGCCATGAAATTAATATGAAGAGTGGTAGCAACATT
GCTTTTTCTCATGGTGGCAAAATTATTCTAAAGAGCAAAGGTAGTGTTGTTTCAAAAGGTGGTAAATTTGGTCTAAAGAGCAATGGGAATAATAATGTCATTGTTTCTCA
TGGTCTTGAAACTCCAATGAGTAGAAACAAAGCCTTGTCTTTTGGTCTAGAAATAAAGAAGCAAATTGTTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAAGATTCATA
TTGGTGTTTCTAATGGTGGAAATATTAGTCTAAAGAAGAGAGGTAGTATTGTTTCAAATGGTGGTAGAATTGGTGTGTGA
Protein sequenceShow/hide protein sequence
MEIARGFKLFQTLFLVFAWQCFLKVSATFNDATGVVDLAPNHHFSFRAFGWPRIVTSNVGDSIASSTVNNQIRAEAPTGIAPVGLETPINKEDKVSSFGHEINMKSGSNI
AFSHGGKIILKSKGSVVSKGGKFGLKSNGNNNVIVSHGLETPMSRNKALSFGLEIKKQIVASLGLKAPKRKIHIGVSNGGNISLKKRGSIVSNGGRIGV