; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G024260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat protein
Genome locationchr02:30846748..30848571
RNA-Seq ExpressionLsi02G024260
SyntenyLsi02G024260
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]6.3e-4056.74Show/hide
Query:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKIDA----SNDNEINLKSGGN
        V ATF D TGVV+ GLNH FSFRAFGWP I T N   +I STV  QIRAEAP GIAPVGL+T I+K+ K  S+  +IIK+I      SND+E NL +G N
Subjt:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKIDA----SNDNEINLKSGGN

Query:  IAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG
        IAFSHGGKV +KSKGSV+  G  G K NG         E     NK LSFG++IKK  +ASLGLK  +  V++GVS G
Subjt:  IAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG

KAA0048677.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.3e-3754.69Show/hide
Query:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKID----ASNDNEINLKSGGN
        V ATF+D TGVV+ GLNH FSFRAFGWP I T N   SI STV  QIRAEAP GIAPVGLETPI+K+DKV S   +IIK+I      SND+E  L SG N
Subjt:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKID----ASNDNEINLKSGGN

Query:  IAFSHGGKVILKSKGSV--SKGGKF-GLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRN-----------VHIGVSNG
        IAFS+ GKV +KSK SV  S GGK  G+ S  NN            +  +L FG+EIKK  +ASLG+KA K N           V++GVS+G
Subjt:  IAFSHGGKVILKSKGSV--SKGGKF-GLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRN-----------VHIGVSNG

KAA0048678.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.6e-2544.69Show/hide
Query:  VSATFNDATGVVDHGLNHHFSFR---AFGWPRIETSNAGNSIASTVNNQIRAEAPT-GIAPVGLETPIDKQDKVSSFGHEIIKKIDASNDNEINLKSGGN
        V ATF+D TG++  G++H +SFR         + ++  G++ +S V+ +   +APT  IAP GLET     +      H+ +  +  S D++I+ KSG N
Subjt:  VSATFNDATGVVDHGLNHHFSFR---AFGWPRIETSNAGNSIASTVNNQIRAEAPT-GIAPVGLETPIDKQDKVSSFGHEIIKKIDASNDNEINLKSGGN

Query:  IAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSR-NKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG
        IA S G        G V+ GGK G+KSN +N  VSHGLET +SR NKALSFG+EI+K  +ASLGLKA  R VH+GVS+G
Subjt:  IAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSR-NKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]2.4e-5569.44Show/hide
Query:  ATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKIDA----SNDNEINLKSGGNIA
        ATFND TGVV+  LNHHFSFR FGWPRI T N   S+ASTVNN   AEAPTGIAPVGL+TPI+K DKVS+FG EIIK+I++    S D+EINLKSGGNIA
Subjt:  ATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKIDA----SNDNEINLKSGGNIA

Query:  FSHGGKVILKSKGSVS---KGGKFGLKSNGNNVIVSHGLETPMSR-NKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG
         SHGGK+ LK KG VS    GGKFGLKS+G NV+VSHG ET MS+ NK LSFG+EIKK  +ASLGLKAPK  ++ GVS+G
Subjt:  FSHGGKVILKSKGSVS---KGGKFGLKSNGNNVIVSHGLETPMSR-NKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]7.0e-3959.17Show/hide
Query:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKID-----ASNDNEINLKSGG
        V ATF+DATGVV+ GLNH FSFRAFGWP I T N   SI STV  QIRAEAP GIAPVGLET I+K+DKV S+  +IIK+I       S+D+E NL SG 
Subjt:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKID-----ASNDNEINLKSGG

Query:  NIAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPK
        NIAFSHGGKV +KSKGSV+        S+G  +   +GL+  +   K LSFG+EIKK   A+LGLKA K
Subjt:  NIAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPK

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein3.0e-5669.23Show/hide
Query:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKIDA----SNDNEINLKSGGN
        V ATFND TGVV+  LNHHFSFR FGWPRI T N   S+ASTVNN   AEAPTGIAPVGL+TPI+K DKVS+FG EIIK+I++    S D+EINLKSGGN
Subjt:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKIDA----SNDNEINLKSGGN

Query:  IAFSHGGKVILKSKGSVS---KGGKFGLKSNGNNVIVSHGLETPMSR-NKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG
        IA SHGGK+ LK KG VS    GGKFGLKS+G NV+VSHG ET MS+ NK LSFG+EIKK  +ASLGLKAPK  ++ GVS+G
Subjt:  IAFSHGGKVILKSKGSVS---KGGKFGLKSNGNNVIVSHGLETPMSR-NKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG

A0A0A0K7W7 Uncharacterized protein2.8e-4157.54Show/hide
Query:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKID-----ASNDNEINLKSGG
        V ATF+DATGVV+ GLNH FSFRAFGWP I T +   SI STV  QI AEAP GIAPVGLET I+K+DKV S+  +IIK+I       S+D+E NL SG 
Subjt:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKID-----ASNDNEINLKSGG

Query:  NIAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG
        NIAFSHGGKV +KSKGSV+        S+G  +   +GL+  +   K LSFG+EIKK   A+LGLKA K  V++GVS+G
Subjt:  NIAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG

A0A0A0KAZ8 Uncharacterized protein1.1e-4258.01Show/hide
Query:  MMVSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKID-----ASNDNEINLKS
        ++ SATF+DATGVV+ GLNH FSFRAFGWP I T N   SI STV  QIRAEAP GIAPVGLET I+K+DKV S+  +IIK+I       S+D+E NL S
Subjt:  MMVSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKID-----ASNDNEINLKS

Query:  GGNIAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG
        G NIAFSHGGKV +KSKGSV+        S+G  +   +GL+  +   K LSFG+EIKK   A+LGLKA K  V++GVS+G
Subjt:  GGNIAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG

A0A5A7U057 Ankyrin repeat protein3.1e-4056.74Show/hide
Query:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKIDA----SNDNEINLKSGGN
        V ATF D TGVV+ GLNH FSFRAFGWP I T N   +I STV  QIRAEAP GIAPVGL+T I+K+ K  S+  +IIK+I      SND+E NL +G N
Subjt:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKIDA----SNDNEINLKSGGN

Query:  IAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG
        IAFSHGGKV +KSKGSV+  G  G K NG         E     NK LSFG++IKK  +ASLGLK  +  V++GVS G
Subjt:  IAFSHGGKVILKSKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNG

A0A5A7U318 Ankyrin repeat protein6.4e-3854.69Show/hide
Query:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKID----ASNDNEINLKSGGN
        V ATF+D TGVV+ GLNH FSFRAFGWP I T N   SI STV  QIRAEAP GIAPVGLETPI+K+DKV S   +IIK+I      SND+E  L SG N
Subjt:  VSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKID----ASNDNEINLKSGGN

Query:  IAFSHGGKVILKSKGSV--SKGGKF-GLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRN-----------VHIGVSNG
        IAFS+ GKV +KSK SV  S GGK  G+ S  NN            +  +L FG+EIKK  +ASLG+KA K N           V++GVS+G
Subjt:  IAFSHGGKVILKSKGSV--SKGGKF-GLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRN-----------VHIGVSNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGTGAGTGCCACTTTCAACGATGCCACCGGTGTCGTAGATCACGGCCTCAACCATCATTTTTCTTTTCGTGCGTTCGGATGGCCTCGAATCGAAACCTCAAATGC
CGGTAATAGCATCGCATCAACTGTAAACAATCAAATACGTGCAGAAGCACCAACAGGGATTGCCCCAGTTGGGCTTGAAACTCCAATCGACAAACAGGACAAGGTTTCAT
CTTTTGGTCACGAAATTATTAAAAAGATCGATGCTTCTAATGATAATGAAATTAATTTGAAGAGTGGTGGCAACATTGCTTTTTCTCATGGTGGCAAAGTTATTCTAAAG
AGCAAAGGTAGTGTTTCAAAAGGTGGTAAATTTGGTCTAAAAAGCAATGGGAATAATGTCATTGTTTCTCATGGTCTTGAAACTCCAATGAGTAGAAACAAAGCCTTGTC
TTTTGGTCTAGAAATAAAGAAGCAAATTATTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAACGTTCATATTGGTGTTTCTAATGGGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGTGAGTGCCACTTTCAACGATGCCACCGGTGTCGTAGATCACGGCCTCAACCATCATTTTTCTTTTCGTGCGTTCGGATGGCCTCGAATCGAAACCTCAAATGC
CGGTAATAGCATCGCATCAACTGTAAACAATCAAATACGTGCAGAAGCACCAACAGGGATTGCCCCAGTTGGGCTTGAAACTCCAATCGACAAACAGGACAAGGTTTCAT
CTTTTGGTCACGAAATTATTAAAAAGATCGATGCTTCTAATGATAATGAAATTAATTTGAAGAGTGGTGGCAACATTGCTTTTTCTCATGGTGGCAAAGTTATTCTAAAG
AGCAAAGGTAGTGTTTCAAAAGGTGGTAAATTTGGTCTAAAAAGCAATGGGAATAATGTCATTGTTTCTCATGGTCTTGAAACTCCAATGAGTAGAAACAAAGCCTTGTC
TTTTGGTCTAGAAATAAAGAAGCAAATTATTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAACGTTCATATTGGTGTTTCTAATGGGTGGTAG
Protein sequenceShow/hide protein sequence
MMVSATFNDATGVVDHGLNHHFSFRAFGWPRIETSNAGNSIASTVNNQIRAEAPTGIAPVGLETPIDKQDKVSSFGHEIIKKIDASNDNEINLKSGGNIAFSHGGKVILK
SKGSVSKGGKFGLKSNGNNVIVSHGLETPMSRNKALSFGLEIKKQIIASLGLKAPKRNVHIGVSNGW