CuGenDBv2

Gene ID	Lsi02G024280
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Ankyrin repeat protein
Genome location	chr02:30848708..30848983
RNA-Seq Expression	Lsi02G024280
Synteny	Lsi02G024280
Gene Ontology terms	GO:0030150 - protein import into mitochondrial matrix (biological process) GO:0005744 - TIM23 mitochondrial import inner membrane translocase complex (cellular component) GO:0031305 - integral component of mitochondrial inner membrane (cellular component) GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0046647.1 Ankyrin repeat protein [Cucumis melo var. makuwa]

4.9e-12

62.32

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Query:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA
        SSG+   SNTGGS+ SS+VDI+SP Q P TP+IAP G+ET+P I+   +  AFVSKDHDI+W+SG NIA
Subjt:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA

KAA0046651.1 Ankyrin repeat protein [Cucumis melo var. makuwa]

1.4e-11

63.24

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Query:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNI
        SSG+   SNTGGS+ SS+VDI+SP Q PT  EIAP G+ET+P I+      AFVSKDHDI+WKSG NI
Subjt:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNI

KAA0048678.1 Ankyrin repeat protein [Cucumis melo var. makuwa]

6.4e-12

62.32

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Query:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA
        SSG+   SNTGGS+ SS+VD +SP Q P TP+IAP G+ET+P I+   +  AFVSKDHDI+WKSG NIA
Subjt:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA

KGN45513.2 hypothetical protein Csa_023821, partial [Cucumis sativus]

2.0e-13

63.77

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Query:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA
        S G+   SNTGGS+ASS+VDI+SPAQ PT+ EIAP G+ETDP I    + + F+SKDHDI+WKSG NIA
Subjt:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA

TYK18189.1 Ankyrin repeat protein [Cucumis melo var. makuwa]

3.7e-12

63.77

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Query:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA
        SSG+   SNTGGS+ SS+VDI+SP Q PT  EIAP G+ET+P I+      AFVSKDHDI+WKSG NIA
Subjt:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB06 Uncharacterized protein

9.6e-14

63.77

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Query:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA
        S G+   SNTGGS+ASS+VDI+SPAQ PT+ EIAP G+ETDP I    + + F+SKDHDI+WKSG NIA
Subjt:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA

A0A5A7TZ96 Ankyrin repeat protein

6.9e-12

63.24

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Query:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNI
        SSG+   SNTGGS+ SS+VDI+SP Q PT  EIAP G+ET+P I+      AFVSKDHDI+WKSG NI
Subjt:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNI

A0A5A7U0F0 Ankyrin repeat protein

3.1e-12

62.32

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Query:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA
        SSG+   SNTGGS+ SS+VD +SP Q P TP+IAP G+ET+P I+   +  AFVSKDHDI+WKSG NIA
Subjt:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA

A0A5D3D3H1 Ankyrin repeat protein

2.4e-12

62.32

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Query:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA
        SSG+   SNTGGS+ SS+VDI+SP Q P TP+IAP G+ET+P I+   +  AFVSKDHDI+W+SG NIA
Subjt:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA

A0A5D3D3W7 Ankyrin repeat protein

1.8e-12

63.77

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Query:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA
        SSG+   SNTGGS+ SS+VDI+SP Q PT  EIAP G+ET+P I+      AFVSKDHDI+WKSG NIA
Subjt:  SSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDP-IEKMREIDAFVSKDHDIYWKSGGNIA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCACCGGCATATTTGGTCTCGGCTTCAACTGTCGCTTTTCTTTCCGCCATACCTCTGGATGAATCCAGTGGTATCACGACGCTTTCAAACACCGGCGGTAGCAGCGC
ATCGAGCATCGTAGACATCAAGAGCCCTGCACAACCACCAACAACACCCGAGATTGCCCCTGTTGGAGTTGAAACTGATCCAATAGAAAAGATGCGTGAGATTGATGCTT
TTGTTTCTAAGGATCATGATATTTATTGGAAGAGTGGTGGTAATATTGCTCATTGA

mRNA sequence

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Protein sequence

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MSPAYLVSASTVAFLSAIPLDESSGITTLSNTGGSSASSIVDIKSPAQPPTTPEIAPVGVETDPIEKMREIDAFVSKDHDIYWKSGGNIAH

Lsi02G024280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome