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Lsi02G024300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat protein
Genome locationchr02:30851622..30854368
RNA-Seq ExpressionLsi02G024300
SyntenyLsi02G024300
Gene Ontology termsGO:0030150 - protein import into mitochondrial matrix (biological process)
GO:0005744 - TIM23 mitochondrial import inner membrane translocase complex (cellular component)
GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046647.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.5e-3052.15Show/hide
Query:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE
        MA AKGFKL  TL LV    CCVKVGATF DVTGIFGL  N  +SF +T GSSG+    NTGGS+ SSVVDIES  QAP TP+IA  G+ET+P I+   +
Subjt:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE

Query:  IDAFVSKDHDIHWKSGGNIAHYSHGGIISRKMKGETKASISRMFIIGSVSSPTGTISGVGVGV
          AFVSKDHDIHW+SG NIA  S GG+++   K   K++ S   +   + + +     +  G+
Subjt:  IDAFVSKDHDIHWKSGGNIAHYSHGGIISRKMKGETKASISRMFIIGSVSSPTGTISGVGVGV

KAA0046651.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.3e-3164.34Show/hide
Query:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE
        MA AKG KL HTLLLV    CCVKVGATF DVTGI GL  N H+SF +T GSSG+    NTGGS+ SSVVDIES  QAPT  EIA  G+ET+P I+    
Subjt:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE

Query:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS
          AFVSKDHDIHWKSG NI   S GG++S
Subjt:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS

KAA0048678.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.5e-3057.24Show/hide
Query:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE
        MA  +GFKL H L LV A  CCVKVGATF DVTGI GL  +H +SF +T GSSG+    NTGGS+ SSVVD ES  QAP TP+IA  G+ET+P I+   +
Subjt:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE

Query:  IDAFVSKDHDIHWKSGGNIAHYSHGGIISRKMKGETKASISRMFI
          AFVSKDHDIHWKSG NIA  S GGI++   K   K++ S   +
Subjt:  IDAFVSKDHDIHWKSGGNIAHYSHGGIISRKMKGETKASISRMFI

TYK18187.1 Ankyrin repeat protein [Cucumis melo var. makuwa]3.7e-2961.24Show/hide
Query:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDPIEK-MRE
        MA  +GFKL HTL L+F+  CCVKVGATF DVTGI GL  NH +SF H  GSSG+    NT GS ASSVVDIES AQAPT+ EI   G E D   K   +
Subjt:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDPIEK-MRE

Query:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS
         +AF+SKDHDIHWKSG +IA   HGG++S
Subjt:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS

TYK18189.1 Ankyrin repeat protein [Cucumis melo var. makuwa]4.6e-3265.12Show/hide
Query:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE
        MA AKG KL HTLLLV    CCVKVGATF DVTGI GL  N H+SF +T GSSG+    NTGGS+ SSVVDIES  QAPT  EIA  G+ET+P I+    
Subjt:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE

Query:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS
          AFVSKDHDIHWKSG NIA  S GG++S
Subjt:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS

TrEMBL top hitse value%identityAlignment
A0A0A0KB06 Uncharacterized protein1.0e-3263.57Show/hide
Query:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE
        MA  +GF L HTL LV A  CCV VGATF DVTGI GL  +H +SF +T GS G+    NTGGS+ASSVVDIES AQAPT+ EIA  G+ETDP I    +
Subjt:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE

Query:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS
         + F+SKDHDIHWKSG NIA  SHGG+IS
Subjt:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS

A0A5A7TZ96 Ankyrin repeat protein6.5e-3264.34Show/hide
Query:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE
        MA AKG KL HTLLLV    CCVKVGATF DVTGI GL  N H+SF +T GSSG+    NTGGS+ SSVVDIES  QAPT  EIA  G+ET+P I+    
Subjt:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE

Query:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS
          AFVSKDHDIHWKSG NI   S GG++S
Subjt:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS

A0A5A7U0F0 Ankyrin repeat protein7.2e-3157.24Show/hide
Query:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE
        MA  +GFKL H L LV A  CCVKVGATF DVTGI GL  +H +SF +T GSSG+    NTGGS+ SSVVD ES  QAP TP+IA  G+ET+P I+   +
Subjt:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE

Query:  IDAFVSKDHDIHWKSGGNIAHYSHGGIISRKMKGETKASISRMFI
          AFVSKDHDIHWKSG NIA  S GGI++   K   K++ S   +
Subjt:  IDAFVSKDHDIHWKSGGNIAHYSHGGIISRKMKGETKASISRMFI

A0A5D3D3H1 Ankyrin repeat protein1.2e-3052.15Show/hide
Query:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE
        MA AKGFKL  TL LV    CCVKVGATF DVTGIFGL  N  +SF +T GSSG+    NTGGS+ SSVVDIES  QAP TP+IA  G+ET+P I+   +
Subjt:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE

Query:  IDAFVSKDHDIHWKSGGNIAHYSHGGIISRKMKGETKASISRMFIIGSVSSPTGTISGVGVGV
          AFVSKDHDIHW+SG NIA  S GG+++   K   K++ S   +   + + +     +  G+
Subjt:  IDAFVSKDHDIHWKSGGNIAHYSHGGIISRKMKGETKASISRMFIIGSVSSPTGTISGVGVGV

A0A5D3D3W7 Ankyrin repeat protein2.2e-3265.12Show/hide
Query:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE
        MA AKG KL HTLLLV    CCVKVGATF DVTGI GL  N H+SF +T GSSG+    NTGGS+ SSVVDIES  QAPT  EIA  G+ET+P I+    
Subjt:  MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDP-IEKMRE

Query:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS
          AFVSKDHDIHWKSG NIA  S GG++S
Subjt:  IDAFVSKDHDIHWKSGGNIAHYSHGGIIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCTAAAGGTTTTAAGCTTTCTCACACCTTGTTGTTAGTGTTTGCTTTGCATTGTTGTGTGAAGGTTGGTGCCACTTTTGACGATGTCACCGGCATATTCGG
TCTCGACTTCAACCATCACTTTTCTTTTTGCCATACCTCTGGATCTAGTGGTATCACAACGCTTTTAAACACCGGTGGTAGCAGCGCATCGAGCGTCGTAGACATCGAGA
GCCTTGCACAAGCACCAACAACACCCGAGATTGCCCATGTTGGAGTTGAAACTGATCCAATAGAAAAGATGCGTGAGATTGATGCTTTTGTTTCTAAAGATCATGATATT
CATTGGAAGAGTGGTGGTAATATTGCTCATTATTCTCATGGTGGAATAATTAGTCGAAAGATGAAAGGTGAAACAAAAGCATCCATCTCACGCATGTTTATTATTGGATC
AGTTTCAAGTCCAACAGGGACAATCTCAGGTGTTGGTGTTGGGGTTGGTGCACGACTCTCGATGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCTAAAGGTTTTAAGCTTTCTCACACCTTGTTGTTAGTGTTTGCTTTGCATTGTTGTGTGAAGGTTGGTGCCACTTTTGACGATGTCACCGGCATATTCGG
TCTCGACTTCAACCATCACTTTTCTTTTTGCCATACCTCTGGATCTAGTGGTATCACAACGCTTTTAAACACCGGTGGTAGCAGCGCATCGAGCGTCGTAGACATCGAGA
GCCTTGCACAAGCACCAACAACACCCGAGATTGCCCATGTTGGAGTTGAAACTGATCCAATAGAAAAGATGCGTGAGATTGATGCTTTTGTTTCTAAAGATCATGATATT
CATTGGAAGAGTGGTGGTAATATTGCTCATTATTCTCATGGTGGAATAATTAGTCGAAAGATGAAAGGTGAAACAAAAGCATCCATCTCACGCATGTTTATTATTGGATC
AGTTTCAAGTCCAACAGGGACAATCTCAGGTGTTGGTGTTGGGGTTGGTGCACGACTCTCGATGTCATGA
Protein sequenceShow/hide protein sequence
MAMAKGFKLSHTLLLVFALHCCVKVGATFDDVTGIFGLDFNHHFSFCHTSGSSGITTLLNTGGSSASSVVDIESLAQAPTTPEIAHVGVETDPIEKMREIDAFVSKDHDI
HWKSGGNIAHYSHGGIISRKMKGETKASISRMFIIGSVSSPTGTISGVGVGVGARLSMS