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Lsi02G024430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionType B response regulator
Genome locationchr02:30982251..30984842
RNA-Seq ExpressionLsi02G024430
SyntenyLsi02G024430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046668.1 type B response regulator [Cucumis melo var. makuwa]6.9e-1640.1Show/hide
Query:  KRHLEVDKASKLPSQSISLDVTKRRSNQEEDMRK------------------------------QMLQENVI-CEMKHQRWPLI-ESLLGPGIKLHNMFF
        K H+EVDKAS++P ++IS + T  R NQEE+MR                               Q LQEN++  EM +QRWPL  ESL  PG+   NMF 
Subjt:  KRHLEVDKASKLPSQSISLDVTKRRSNQEEDMRK------------------------------QMLQENVI-CEMKHQRWPLI-ESLLGPGIKLHNMFF

Query:  PHLYKKNQHIRLPNLPNY------------------QFSRYVDENNNNNVIVPLINDRLTNDV-SNDCLHL-QILRE---YQEAYKDFYDHSMHIRP
        P    KN+   L NLPN                   QF+RY D NNNNNV+  LIND L+N V  ND  H  ++LRE   YQE   D +D  M+I+P
Subjt:  PHLYKKNQHIRLPNLPNY------------------QFSRYVDENNNNNVIVPLINDRLTNDV-SNDCLHL-QILRE---YQEAYKDFYDHSMHIRP
TrEMBL top hitse value%identityAlignment
A0A0A0KB26 Uncharacterized protein8.8e-0937.96Show/hide
Query:  QEEDMRKQMLQENVICEM--KHQRWPLIESLLGPGIKLHNMFFPHLYKKNQHIRLPNLPNYQFSRYVDENNNNNVIVP--------------------LI
        QE +MR Q  QE+       + QRWPL ESL  PG+   N+  P  ++KN+   L NLPN QF  YVD NNN NVI                      LI
Subjt:  QEEDMRKQMLQENVICEM--KHQRWPLIESLLGPGIKLHNMFFPHLYKKNQHIRLPNLPNYQFSRYVDENNNNNVIVP--------------------LI

Query:  NDRLTNDVS-NDCLHLQILREYQEAYKDFYDHSMHIR
        ND L++ VS ND  HL++  +    Y+++ D  M+I+
Subjt:  NDRLTNDVS-NDCLHLQILREYQEAYKDFYDHSMHIR
A0A5D3D1X5 Type B response regulator3.3e-1640.1Show/hide
Query:  KRHLEVDKASKLPSQSISLDVTKRRSNQEEDMRK------------------------------QMLQENVI-CEMKHQRWPLI-ESLLGPGIKLHNMFF
        K H+EVDKAS++P ++IS + T  R NQEE+MR                               Q LQEN++  EM +QRWPL  ESL  PG+   NMF 
Subjt:  KRHLEVDKASKLPSQSISLDVTKRRSNQEEDMRK------------------------------QMLQENVI-CEMKHQRWPLI-ESLLGPGIKLHNMFF

Query:  PHLYKKNQHIRLPNLPNY------------------QFSRYVDENNNNNVIVPLINDRLTNDV-SNDCLHL-QILRE---YQEAYKDFYDHSMHIRP
        P    KN+   L NLPN                   QF+RY D NNNNNV+  LIND L+N V  ND  H  ++LRE   YQE   D +D  M+I+P
Subjt:  PHLYKKNQHIRLPNLPNY------------------QFSRYVDENNNNNVIVPLINDRLTNDV-SNDCLHL-QILRE---YQEAYKDFYDHSMHIRP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTTGAATCTTAAAAGACATCTTGAGGTTGATAAAGCATCAAAGTTACCTTCCCAATCAATCTCTCTCGATGTGACCAAAAGAAGATCAAATCAAGAAGAAGACAT
GAGAAAACAAATGTTGCAAGAAAATGTCATTTGTGAAATGAAACATCAACGGTGGCCTCTAATTGAATCTCTATTAGGACCGGGCATAAAGCTACACAACATGTTTTTTC
CTCATTTATATAAGAAAAATCAACATATTCGTCTTCCAAATCTACCTAATTATCAATTCTCTAGATATGTTGATGAGAATAATAATAACAATGTTATTGTCCCTCTTATC
AACGATAGATTGACCAATGATGTTTCAAATGATTGTCTCCATCTCCAGATTTTGAGAGAATATCAAGAAGCTTACAAAGATTTCTATGATCATAGTATGCATATCAGACC
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGTTGAATCTTAAAAGACATCTTGAGGTTGATAAAGCATCAAAGTTACCTTCCCAATCAATCTCTCTCGATGTGACCAAAAGAAGATCAAATCAAGAAGAAGACAT
GAGAAAACAAATGTTGCAAGAAAATGTCATTTGTGAAATGAAACATCAACGGTGGCCTCTAATTGAATCTCTATTAGGACCGGGCATAAAGCTACACAACATGTTTTTTC
CTCATTTATATAAGAAAAATCAACATATTCGTCTTCCAAATCTACCTAATTATCAATTCTCTAGATATGTTGATGAGAATAATAATAACAATGTTATTGTCCCTCTTATC
AACGATAGATTGACCAATGATGTTTCAAATGATTGTCTCCATCTCCAGATTTTGAGAGAATATCAAGAAGCTTACAAAGATTTCTATGATCATAGTATGCATATCAGACC
CTAG
Protein sequenceShow/hide protein sequence
MLLNLKRHLEVDKASKLPSQSISLDVTKRRSNQEEDMRKQMLQENVICEMKHQRWPLIESLLGPGIKLHNMFFPHLYKKNQHIRLPNLPNYQFSRYVDENNNNNVIVPLI
NDRLTNDVSNDCLHLQILREYQEAYKDFYDHSMHIRP