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Lsi02G024790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncytochrome c oxidase subunit 5C-like
Genome locationchr02:31266446..31267394
RNA-Seq ExpressionLsi02G024790
SyntenyLsi02G024790
Gene Ontology termsGO:0005746 - mitochondrial respirasome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008432 - Cytochrome c oxidase subunit 5c


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646364.1 hypothetical protein Csa_016441 [Cucumis sativus]6.4e-3094.67Show/hide
Query:  FLTVFKLEKQMAAAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        FLTVFK EKQM AAGRVAHVTL+GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VVVDEE
Subjt:  FLTVFKLEKQMAAAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

KAG6593239.1 putative cytochrome c oxidase subunit 5C-3, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2984.71Show/hide
Query:  HCFSSITRADFLTVFKLEKQMAAAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        H  +SI+ +DF TVF+ EKQM AAG+VAHVTLKGPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Subjt:  HCFSSITRADFLTVFKLEKQMAAAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

XP_022146752.1 cytochrome c oxidase subunit 5C-like [Momordica charantia]5.6e-26100Show/hide
Query:  AGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        AGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
Subjt:  AGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

XP_023548933.1 cytochrome c oxidase subunit 5C-like [Cucurbita pepo subsp. pepo]1.5e-2698.41Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTLKGPSVVKEILTGMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

XP_038897009.1 cytochrome c oxidase subunit 5C-like [Benincasa hispida]6.6e-27100Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

TrEMBL top hitse value%identityAlignment
A0A1S3BRM0 cytochrome c oxidase subunit 5C-like4.6e-2696.83Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTL+GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VVVDEE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

A0A6J1D0G3 cytochrome c oxidase subunit 5C-like2.7e-26100Show/hide
Query:  AGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        AGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
Subjt:  AGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

A0A6J1GMY7 cytochrome c oxidase subunit 5C-like3.5e-2696.83Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTLKGPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

A0A6J1JM28 cytochrome c oxidase subunit 5C-like3.5e-2696.83Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTLKGPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

A0A6J1L0D4 cytochrome c oxidase subunit 5C-like3.5e-2696.83Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTLKGPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

SwissProt top hitse value%identityAlignment
Q42841 Cytochrome c oxidase subunit 5C2.8e-2072.58Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        A GRVAH TLKGPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+I VVV+E
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

Q8VY39 Cytochrome c oxidase subunit 5C-22.1e-2077.05Show/hide
Query:  GRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        GRVAH  LKGPSVVKE++ G  L L AG  WKMH WNEQRK RAFYDLLEKGEI VVVDEE
Subjt:  GRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

Q9FLK2 Probable cytochrome c oxidase subunit 5C-31.1e-1969.84Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  ++AH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV EE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

Q9LZQ0 Cytochrome c oxidase subunit 5C-21.4e-1969.84Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  +VAH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVV  EE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

Q9SXX7 Cytochrome c oxidase subunit 5C4.8e-2070.97Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        A GR+AH TLKGPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+I VVV+E
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

Arabidopsis top hitse value%identityAlignment
AT2G47380.1 Cytochrome c oxidase subunit Vc family protein8.4e-2068.25Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  +VAH TLKGPSVVKE+  G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV  EE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

AT5G61310.1 Cytochrome c oxidase subunit Vc family protein7.6e-2169.84Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  ++AH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV EE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

AT5G61310.2 Cytochrome c oxidase subunit Vc family protein7.6e-2169.84Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  ++AH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV EE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

AT5G61310.3 Cytochrome c oxidase subunit Vc family protein7.6e-2169.84Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  ++AH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV EE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

AT5G61310.4 Cytochrome c oxidase subunit Vc family protein7.6e-2169.84Show/hide
Query:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  ++AH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV EE
Subjt:  AAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTGTTTCTCTTCGATCACTCGGGCAGATTTTCTTACAGTTTTCAAACTAGAAAAGCAAATGGCTGCTGCTGGCAGGGTGGCTCACGTCACACTTAAAGGACCAAG
TGTCGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAATGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATCTAC
TGGAGAAGGGTGAGATCGGCGTTGTTGTTGATGAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTGTTTCTCTTCGATCACTCGGGCAGATTTTCTTACAGTTTTCAAACTAGAAAAGCAAATGGCTGCTGCTGGCAGGGTGGCTCACGTCACACTTAAAGGACCAAG
TGTCGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAATGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATCTAC
TGGAGAAGGGTGAGATCGGCGTTGTTGTTGATGAAGAATAG
Protein sequenceShow/hide protein sequence
MHCFSSITRADFLTVFKLEKQMAAAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE