| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7014295.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita argyrosperma subsp. argyrosperma] | 5.1e-103 | 83.7 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLSRIEHTLRVPPS+LHLPILDAIKGELEKLFLDKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKVKESDA GLRIS
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
LGFFEDIYVP LLPS S+F+PDP NGGK RWVWDY+G DIYETDEI+F+IHSI+YPAIPV +QP E +SKF MEEQPKEN NVK FAPM+V ATID+
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
Query: DGLGPVSWWDGSGDVEDEDEAEAEEDS
DGLGPVSWWDGSGD + E EAEEDS
Subjt: DGLGPVSWWDGSGDVEDEDEAEAEEDS
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| XP_022954042.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita moschata] | 1.2e-104 | 84.14 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLSRIEHTLRVPPS+LHLPILDAIKGELEKLFLDKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKVKESDA GLRIS
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
LGFFEDIYVP LLPS S+F+PDP NGGK RWVWDY+G DIYETDEI+F+IHSI+YPAIPV +QP E +SKF MEEQPKEN NVK FAPM+V ATID+
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
Query: DGLGPVSWWDGSGDVEDEDEAEAEEDS
DGLGPVSWWDGSGD + + EAEAEEDS
Subjt: DGLGPVSWWDGSGDVEDEDEAEAEEDS
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| XP_022991804.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita maxima] | 2.3e-103 | 83.84 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLSRIEHTLRVPPS+LHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKVKESDA GLRIS
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
LGFFEDIYVP LLPS S+F+PDP N GK RWVWDY+G DIYETDEI+F+IHSI+YP IPV +QP E +SKF MEEQPKEN NVK FAPM+V ATID+
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
Query: DGLGPVSWWDGSG--DVEDEDEAEAEEDS
DGLGPVSWWDGSG D E E EAEAEEDS
Subjt: DGLGPVSWWDGSG--DVEDEDEAEAEEDS
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| XP_023547503.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita pepo subsp. pepo] | 7.9e-104 | 84.14 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLSRIEHTLRVPPS+LHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKVKESDA GLRIS
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
LGFFEDIYVP LLPS S+F+PDP NGGK RWVWDY+G DIYETDEI+F+IHSI+YPAIPV +QP E +SKF MEEQPKEN NVK FAPM+V ATID+
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
Query: DGLGPVSWWDGSGDVEDEDEAEAEEDS
DGLGPVSWWDGSGD + +AEAEEDS
Subjt: DGLGPVSWWDGSGDVEDEDEAEAEEDS
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| XP_038897233.1 DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Benincasa hispida] | 2.1e-109 | 87.56 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLSRIEHTLRVPP+LLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP GEVIIGKVKES+A+GLRIS
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDHD
LGFFEDI VP +LLPS SKFEPD NNGGK RWVW+Y+ V CDIYETDEIRFKIHSI+YPAIPVEQPKERDSKFLMEEQP+EN NVKAFAPM++ ATIDHD
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDHD
Query: GLGPVSWWDGSGDVEDEDEAEAEED
GLGP+SWW+G GDVEDE EAE E++
Subjt: GLGPVSWWDGSGDVEDEDEAEAEED
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K846 Uncharacterized protein | 6.8e-101 | 80.97 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLSRIEHTLRVPPSLL+LPILDAIKGELEKLF+DKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP GEVIIGKV+ES+ GLRIS
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDHD
LGFFEDIYVP +L+PS S+F PD NNGG+CRWVW Y V DIYE+DEI+FK+HSIEYPAI VEQPKE +SKF MEE+PKE+ NVK FAPM++ A++D D
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDHD
Query: GLGPVSWWDGSGDVEDEDEAEAEEDS
GLGPVSWWDGSG+ E EDE E EEDS
Subjt: GLGPVSWWDGSGDVEDEDEAEAEEDS
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| A0A5A7UWI5 DNA-directed RNA polymerase III subunit RPC8 isoform X1 | 7.0e-98 | 80.53 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLSRIEHTLRVPPSLL+LPILDAIKGELEKLF+DKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP GEVIIGKV+ES+ GLRIS
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDHD
LGFFEDIYVP +L+PS S+F PD NNGG+ RWVW Y V DIYE+DEI+FKIHSIEYPAI VEQPKE +SKF MEE+PKE+ NVK FAPM++ A++D D
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDHD
Query: GLGPVSWWDGSGDVEDEDEAEAEEDS
GLGPVSWWDGSG+ E ED E EEDS
Subjt: GLGPVSWWDGSGDVEDEDEAEAEEDS
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| A0A6J1DFX3 DNA-directed RNA polymerase III subunit RPC8 isoform X2 | 3.2e-103 | 84.21 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLSRIEHTLRVPPS+LHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKVKESDA GLRIS
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEE-QPKENT-NVKAFAPMIVKATID
LGFFEDIYVP LLP+ S+F+PD NGGK RWVWDY+G DIYETDEI+F+IH+IEYPAIPVEQPKE + KFL EE QPKE+T NVKAFAPMIV TID
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEE-QPKENT-NVKAFAPMIVKATID
Query: HDGLGPVSWWDGSGDVEDEDEAEAEEDS
+DGLGPVSWWDGSGDV+ E E AEEDS
Subjt: HDGLGPVSWWDGSGDVEDEDEAEAEEDS
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| A0A6J1GPX5 DNA-directed RNA polymerase III subunit RPC8 | 5.9e-105 | 84.14 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLSRIEHTLRVPPS+LHLPILDAIKGELEKLFLDKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKVKESDA GLRIS
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
LGFFEDIYVP LLPS S+F+PDP NGGK RWVWDY+G DIYETDEI+F+IHSI+YPAIPV +QP E +SKF MEEQPKEN NVK FAPM+V ATID+
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
Query: DGLGPVSWWDGSGDVEDEDEAEAEEDS
DGLGPVSWWDGSGD + + EAEAEEDS
Subjt: DGLGPVSWWDGSGDVEDEDEAEAEEDS
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| A0A6J1JVU8 DNA-directed RNA polymerase III subunit RPC8 | 1.1e-103 | 83.84 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLSRIEHTLRVPPS+LHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKVKESDA GLRIS
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
LGFFEDIYVP LLPS S+F+PDP N GK RWVWDY+G DIYETDEI+F+IHSI+YP IPV +QP E +SKF MEEQPKEN NVK FAPM+V ATID+
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDEIRFKIHSIEYPAIPV-EQPKERDSKFLMEEQPKENTNVKAFAPMIVKATIDH
Query: DGLGPVSWWDGSG--DVEDEDEAEAEEDS
DGLGPVSWWDGSG D E E EAEAEEDS
Subjt: DGLGPVSWWDGSG--DVEDEDEAEAEEDS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O94285 DNA-directed RNA polymerase III subunit rpc8 | 1.7e-29 | 33.18 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MF LSR + + PS P +A+ E+ K + +KV+ N+GL I VYD + G I DG++ VVF LI+FRP +GEV++GK+K EG+R++
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEG----VSCDIY--ETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVK
+ FF+DI++P +L F PD WVW EG ++Y +EIRF+I S ++ + + + +++ + + E+ +P +
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEG----VSCDIY--ETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVK
Query: ATIDHDGLGPVSWW
A+ DGLG +WW
Subjt: ATIDHDGLGPVSWW
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| P35718 DNA-directed RNA polymerase III subunit RPC8 | 5.1e-29 | 30.91 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MF LS+I +R+PP H + AI +L F +K++ N+GLCI++YD+ +V+ G + P DG++ V F +VF+P GE++ G + + AEG+++S
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: -LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDE-IRFKIHSIEYPAIPVEQPKERDSKFLME---------EQPKENTNVKAFA
LG F+DI++P +L + P+ + W+W + + ++ +E IRF+I + + + PKER+ + + E+ +N A+A
Subjt: -LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETDE-IRFKIHSIEYPAIPVEQPKERDSKFLME---------EQPKENTNVKAFA
Query: PMIVKATIDHDGLGPVSWWD
+ + DG+G VSWW+
Subjt: PMIVKATIDHDGLGPVSWWD
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| Q2T9X1 DNA-directed RNA polymerase III subunit RPC8 | 2.4e-31 | 34.88 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MF L + T+R+PP + D+I EL K +KV+ N+GLCI ++DI ++ ++FP DGA+ KV F +VF P E++IGK+K EG+ +S
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGV--SCDIYET--DEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKAT
LGFF+DI +P + L +KF+ + WVW+YE + D+Y +E+RF++ + P ++ EE PK+ AP + +
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGV--SCDIYET--DEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKAT
Query: IDHDGLGPVSWWDGS
I GLG +SWW S
Subjt: IDHDGLGPVSWWDGS
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| Q9D2C6 DNA-directed RNA polymerase III subunit RPC8 | 1.9e-31 | 35.85 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MF L + T+R+PP + D+I EL K +KVV N+GLCI ++DI ++ ++FP DGA+ KV F +VF P E++IGK+K EG+ +S
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGV--SCDIY--ETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKAT
LGFF+DI +P + L +KF+ + WVW+YE + D+Y +EIRF++ + P ++ EE PK+ AP + +
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGV--SCDIY--ETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKAT
Query: IDHDGLGPVSWW
I GLG +SWW
Subjt: IDHDGLGPVSWW
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| Q9Y535 DNA-directed RNA polymerase III subunit RPC8 | 6.4e-32 | 36.32 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MF L + T+R+PP + D+I EL K +KVV N+GLCI ++DI ++ ++FP DGA+ KV F +VF P E++IGK+K EG+ +S
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGV--SCDIY--ETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKAT
LGFF+DI +P + L +KF+ + WVW+YE + D+Y +EIRF++ + P D+ EE PK+ AP + +
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGV--SCDIY--ETDEIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKAT
Query: IDHDGLGPVSWW
I GLG +SWW
Subjt: IDHDGLGPVSWW
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G06790.1 RNA polymerase Rpb7 N-terminal domain-containing protein | 2.5e-63 | 52.27 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLS +EH+LRVPP LL+LP+ DAIK L+ +FLDKV+A+LGLC+S+YDI+SV+GGF+ P DGAATYKV ++VFRP GEVI K KESDA GLR++
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETD--EIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKATID
LGFF+DIYVP+ L+P ++ EPDP N + WVW+Y D D +I+F++ SI YP++P E+ ++ K FAPM+V +D
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETD--EIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIVKATID
Query: HDGLGPVSWWDGSGDVEDED
DGLGPVSWWD V+ E+
Subjt: HDGLGPVSWWDGSGDVEDED
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| AT1G06790.2 RNA polymerase Rpb7 N-terminal domain-containing protein | 4.2e-55 | 52.31 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MFYLS +EH+LRVPP LL+LP+ DAIK L+ +FLDKV+A+LGLC+S+YDI+SV+GGF+ P DGAATYKV ++VFRP GEVI K KESDA GLR++
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETD--EIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIV
LGFF+DIYVP+ L+P ++ EPDP N + WVW+Y D D +I+F++ SI YP++P E+ ++ K FAPM+V
Subjt: LGFFEDIYVPSQLLPSQSKFEPDPNNGGKCRWVWDYEGVSCDIYETD--EIRFKIHSIEYPAIPVEQPKERDSKFLMEEQPKENTNVKAFAPMIV
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| AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain | 1.2e-04 | 29.17 | Show/hide |
Query: LEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRISLGFFEDIYVPSQLLPSQSKFEPDPN
LE +K +LG I+ + ++ G I G + VVF I F+ KGE++ G V + G+ + G +E IY+ +P +F P N
Subjt: LEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRISLGFFEDIYVPSQLLPSQSKFEPDPN
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| AT5G59180.1 DNA-directed RNA polymerase II | 1.2e-04 | 23.81 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
MF+ +E +++ P + + + +L K G +++ I ++ G I G T+ V + +VFRP KGE++ V L
Subjt: MFYLSRIEHTLRVPPSLLHLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPHKGEVIIGKVKESDAEGLRIS
Query: LGFFED-----IYVPSQLLPSQSKFE
+GFF + I+V L+P +F+
Subjt: LGFFED-----IYVPSQLLPSQSKFE
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