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Lsi02G024990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G024990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscription factor MYB108-like protein
Genome locationchr02:31471704..31472506
RNA-Seq ExpressionLsi02G024990
SyntenyLsi02G024990
Gene Ontology termsGO:0009414 - response to water deprivation (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0016036 - cellular response to phosphate starvation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005516 - calmodulin binding (molecular function)
InterPro domainsIPR044676 - MYB-like transcription factor EOBI/EOBII-like, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058537.1 transcription factor MYB108-like protein [Cucumis melo var. makuwa]1.4e-5584.56Show/hide
Query:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-
        MRYVWMPRLLERIQASTDST TTVD+IQP HPPLELTQ SPSGS+ V+ HV PTTSSSDSISDQVQ QVS ISDV ENFN+VDT+EEDR+ MLMEHGCD 
Subjt:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-

Query:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV
        GEAMNEWIGG ELLENG WNEEDMWS LQQQF DDV
Subjt:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV

TYJ96893.1 transcription factor MYB108-like protein [Cucumis melo var. makuwa]1.4e-5584.56Show/hide
Query:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-
        MRYVWMPRLLERIQASTDST TTVD+IQP HPPLELTQ SPSGS+ V+ HV PTTSSSDSISDQVQ QVS ISDV ENFN+VDT+EEDR+ MLMEHGCD 
Subjt:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-

Query:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV
        GEAMNEWIGG ELLENG WNEEDMWS LQQQF DDV
Subjt:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV

XP_004136147.2 transcription factor MYB78 [Cucumis sativus]6.2e-5683.82Show/hide
Query:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCDG
        MRYVWMPRLLERIQASTDSTTT VD+IQPPHPPLELTQ SPSGS+ V+ HV PTTSSSDSISDQVQ QVS +SD+TENFN+VD SEED M MLMEHGCDG
Subjt:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCDG

Query:  EAM-NEWIGGGELLENGFWNEEDMWSFLQQQFDDDV
        EAM NEWIGGGE+LENG WNEEDMW+ LQQQF DDV
Subjt:  EAM-NEWIGGGELLENGFWNEEDMWSFLQQQFDDDV

XP_008461407.1 PREDICTED: transcription factor MYB108-like [Cucumis melo]7.6e-5482.35Show/hide
Query:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-
        MRYVWMPRLLERIQASTDST TTVD+IQP HPPLELTQ SPSGS+ V+ HV PTTSSSDSI DQVQ QVS +SDV ENFN+VDT+EEDR+ MLMEHGCD 
Subjt:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-

Query:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV
         EAMNEWIGG ELLENG WNEEDMWS LQQQF DDV
Subjt:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV

XP_038899114.1 transcription factor MYB78-like [Benincasa hispida]1.3e-5886.67Show/hide
Query:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCDG
        MRYVWMPRLLERIQASTDST+TTVD+IQPPHPPLELTQLSPSGS+ ++ HV PTTSSSDSISDQVQ QVSS+SDV ENFN V TSEED M MLMEHGCDG
Subjt:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCDG

Query:  EAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV
        EAMN WIGGGELLENGFWNEEDMWSFLQQQ  DDV
Subjt:  EAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV

TrEMBL top hitse value%identityAlignment
A0A0A0K5V3 Uncharacterized protein3.0e-5683.82Show/hide
Query:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCDG
        MRYVWMPRLLERIQASTDSTTT VD+IQPPHPPLELTQ SPSGS+ V+ HV PTTSSSDSISDQVQ QVS +SD+TENFN+VD SEED M MLMEHGCDG
Subjt:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCDG

Query:  EAM-NEWIGGGELLENGFWNEEDMWSFLQQQFDDDV
        EAM NEWIGGGE+LENG WNEEDMW+ LQQQF DDV
Subjt:  EAM-NEWIGGGELLENGFWNEEDMWSFLQQQFDDDV

A0A1S3CEB9 transcription factor MYB108-like3.7e-5482.35Show/hide
Query:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-
        MRYVWMPRLLERIQASTDST TTVD+IQP HPPLELTQ SPSGS+ V+ HV PTTSSSDSI DQVQ QVS +SDV ENFN+VDT+EEDR+ MLMEHGCD 
Subjt:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-

Query:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV
         EAMNEWIGG ELLENG WNEEDMWS LQQQF DDV
Subjt:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV

A0A5A7UUY5 Transcription factor MYB108-like protein6.7e-5684.56Show/hide
Query:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-
        MRYVWMPRLLERIQASTDST TTVD+IQP HPPLELTQ SPSGS+ V+ HV PTTSSSDSISDQVQ QVS ISDV ENFN+VDT+EEDR+ MLMEHGCD 
Subjt:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-

Query:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV
        GEAMNEWIGG ELLENG WNEEDMWS LQQQF DDV
Subjt:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV

A0A5D3BC50 Transcription factor MYB108-like protein6.7e-5684.56Show/hide
Query:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-
        MRYVWMPRLLERIQASTDST TTVD+IQP HPPLELTQ SPSGS+ V+ HV PTTSSSDSISDQVQ QVS ISDV ENFN+VDT+EEDR+ MLMEHGCD 
Subjt:  MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCD-

Query:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV
        GEAMNEWIGG ELLENG WNEEDMWS LQQQF DDV
Subjt:  GEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV

A0A6J1DCK9 transcription factor MYB783.1e-3765.94Show/hide
Query:  MRYVWMPRLLERIQASTD--STTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEE-DRMAMLMEHG
        MRYVW+PRLLERIQASTD  +     D  QPPHP L+ T  SPS S  V+ H+ P TSSSDS SDQVQ QVS +SDVTENFNLV   E+ D   MLMEH 
Subjt:  MRYVWMPRLLERIQASTD--STTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEE-DRMAMLMEHG

Query:  CDGEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV
        CDG A+N WIGGGE L++GFW+EED+W FLQQQF DDV
Subjt:  CDGEAMNEWIGGGELLENGFWNEEDMWSFLQQQFDDDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATACGTGTGGATGCCTCGTTTGCTCGAACGTATCCAAGCTTCAACTGACTCGACCACCACCACCGTTGATATCATCCAACCACCACACCCACCTCTCGAGTTGAC
CCAATTGTCACCGTCTGGATCTAATAAAGTCAGCCTTCACGTGGGTCCCACAACTTCATCGTCAGATTCTATATCTGATCAGGTCCAATTTCAAGTTTCGTCTATTTCAG
ACGTGACGGAGAACTTTAACTTGGTAGATACGAGCGAGGAGGATAGGATGGCGATGCTAATGGAACACGGCTGTGACGGAGAGGCGATGAACGAGTGGATAGGTGGCGGA
GAGTTACTGGAGAATGGGTTTTGGAATGAAGAAGATATGTGGTCGTTCTTGCAACAACAATTTGATGATGATGTTTAA
mRNA sequenceShow/hide mRNA sequence
AACAGGTGGTCTAAAATAGCGCAATATTTACCGGGAAGAACAGATAATGAGATAAAAAATTATTGGAGAACAAGGGTCCAAAAGCAAGCCAAACAACTCAATTGTGACGT
GAATAGTAAGCAATTTCGTGACGCCATGCGATACGTGTGGATGCCTCGTTTGCTCGAACGTATCCAAGCTTCAACTGACTCGACCACCACCACCGTTGATATCATCCAAC
CACCACACCCACCTCTCGAGTTGACCCAATTGTCACCGTCTGGATCTAATAAAGTCAGCCTTCACGTGGGTCCCACAACTTCATCGTCAGATTCTATATCTGATCAGGTC
CAATTTCAAGTTTCGTCTATTTCAGACGTGACGGAGAACTTTAACTTGGTAGATACGAGCGAGGAGGATAGGATGGCGATGCTAATGGAACACGGCTGTGACGGAGAGGC
GATGAACGAGTGGATAGGTGGCGGAGAGTTACTGGAGAATGGGTTTTGGAATGAAGAAGATATGTGGTCGTTCTTGCAACAACAATTTGATGATGATGTTTAAATTAAAA
AGAAAATTAGATTAATTAGAAACTTCCAAATTTGAATTTACTTACGTGACGGCAAATATTATAAATAGGGAAATGAATGACTTGACAAATTAGAAATAATATAGGCTAAA
AAATACATGATGACAAAAACAAGCAACATTGAAAGCTTATGGTGTCCACTAGCT
Protein sequenceShow/hide protein sequence
MRYVWMPRLLERIQASTDSTTTTVDIIQPPHPPLELTQLSPSGSNKVSLHVGPTTSSSDSISDQVQFQVSSISDVTENFNLVDTSEEDRMAMLMEHGCDGEAMNEWIGGG
ELLENGFWNEEDMWSFLQQQFDDDV