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Lsi02G025040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G025040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein NIM1-INTERACTING 1
Genome locationchr02:31504943..31505338
RNA-Seq ExpressionLsi02G025040
SyntenyLsi02G025040
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575739.1 hypothetical protein SDJN03_26378, partial [Cucurbita argyrosperma subsp. sororia]8.8e-3162.69Show/hide
Query:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKPC
        MEN+K QPPRE IA+EEE   VEME F+ALVRNFKE+RDR RKE++ GE  E AAEK RK+MKT E+V+++S+WI +FEREDFD++ QV G  + LPK C
Subjt:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKPC

Query:  NLVKEDTAAA---MKKKTKKVRNGDDCLDLNLAL
         LVKEDT  A      K KKV +G DCLDLNL+L
Subjt:  NLVKEDTAAA---MKKKTKKVRNGDDCLDLNLAL

XP_022151003.1 protein NIM1-INTERACTING 1 [Momordica charantia]2.2e-2963.77Show/hide
Query:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKEL--MIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPK
        MENE L+P     A EEEEE ++ME FFAL+RNFKEMRDRRRKEL  MIG+  E   EK+RKKMKTA      STWIP F REDFDE+FQVRGP  +LPK
Subjt:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKEL--MIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPK

Query:  PCNLVKEDT-----AAAMKKKTKKVRNGDDCLDLNLAL
        PCNL+KEDT      AA+ KK K ++N ++CLDLNLAL
Subjt:  PCNLVKEDT-----AAAMKKKTKKVRNGDDCLDLNLAL

XP_022991628.1 uncharacterized protein LOC111488189 [Cucurbita maxima]4.5e-3568.42Show/hide
Query:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKPC
        MEN+K QPPRE IA+EEEEE VEME+F+ALVRNFKE+RDR RKE++ GE +E AAEK RK+MKT E V+++S+WI +FEREDFDE+ QV G A+ LPK C
Subjt:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKPC

Query:  NLVKEDT--AAAMKKKTKKVRNGDDCLDLNLAL
         LVKEDT  AAA  KK KKV +G DCLDLNL+L
Subjt:  NLVKEDT--AAAMKKKTKKVRNGDDCLDLNLAL

XP_023547822.1 uncharacterized protein LOC111806674 [Cucurbita pepo subsp. pepo]2.3e-3163.5Show/hide
Query:  MENEKLQPPRERIAKEEE---EEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILP
        MEN+K QPPR  IA+EEE   EE VEME F+ALVRNFKE+RDR RKE++ GE  E AAEK RK+MKT E  +++S+WI +FEREDFDE+ QV G A+ LP
Subjt:  MENEKLQPPRERIAKEEE---EEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILP

Query:  KPCNLVKEDTAAA---MKKKTKKVRNGDDCLDLNLAL
        K C LVKEDT  A     KK KKV +G DCLDLNL+L
Subjt:  KPCNLVKEDTAAA---MKKKTKKVRNGDDCLDLNLAL

XP_038898983.1 protein NIM1-INTERACTING 1-like [Benincasa hispida]4.5e-4380.58Show/hide
Query:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAA-EKRRKKMKTA-EAVEHRSTWIPKFEREDFDEEFQVRGPALILP-
        MENEKLQP  ERIA+EEEEE  EME FFALVRNFKEMRDRRRKELMIGEEEEIAA EKRRK+MK+A EAVE+RSTWIPKFEREDFDEEFQVRG   ILP 
Subjt:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAA-EKRRKKMKTA-EAVEHRSTWIPKFEREDFDEEFQVRGPALILP-

Query:  KPCNLVKEDTAA-----AMKKKTKKVRNGDDCLDLNLAL
        KP NLVKEDT+A     A  KK K V+NGDDCLDLNLAL
Subjt:  KPCNLVKEDTAA-----AMKKKTKKVRNGDDCLDLNLAL

TrEMBL top hitse value%identityAlignment
A0A0A0K5V7 Uncharacterized protein2.0e-2863.38Show/hide
Query:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGE---EEEIAA-EKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALIL
        MEN KLQP  +  A++  E+  EMERFFALVR+ KEMRD+RRKEL IG+   EEEIAA EKRRK+M+ AE VE+RSTWIPKFEREDFDEEFQ    + + 
Subjt:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGE---EEEIAA-EKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALIL

Query:  PKP-CNLVKEDTAAAM------KKKTKKVRNGDDCLDLNLAL
        P P CNLVK DT AA        K  KKV+NGD  LDLNLAL
Subjt:  PKP-CNLVKEDTAAAM------KKKTKKVRNGDDCLDLNLAL

A0A5A7UYI4 Protein NIM1-INTERACTING 15.8e-2864.54Show/hide
Query:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKP-
        MENEK+QP  ER A+E  EE  EMERFFALVR+FKEMRD+R KEL +GEEEE   EKRRK+MK  + VE+RSTWIPKFEREDFDEEFQ    AL LP+P 
Subjt:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKP-

Query:  CNLVKE---------DTAAAMKKKTKKVRNGDDCLDLNLAL
        CNL K           T AAMK K K+V+NG+  LDLNLAL
Subjt:  CNLVKE---------DTAAAMKKKTKKVRNGDDCLDLNLAL

A0A6J1DAZ5 protein NIM1-INTERACTING 11.1e-2963.77Show/hide
Query:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKEL--MIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPK
        MENE L+P     A EEEEE ++ME FFAL+RNFKEMRDRRRKEL  MIG+  E   EK+RKKMKTA      STWIP F REDFDE+FQVRGP  +LPK
Subjt:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKEL--MIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPK

Query:  PCNLVKEDT-----AAAMKKKTKKVRNGDDCLDLNLAL
        PCNL+KEDT      AA+ KK K ++N ++CLDLNLAL
Subjt:  PCNLVKEDT-----AAAMKKKTKKVRNGDDCLDLNLAL

A0A6J1H831 protein NIM1-INTERACTING 11.7e-2456.94Show/hide
Query:  MENEKLQPPRERIAKE--------EEEEVVEMERFFALVRNFKEMRDRRRKELMIG--EEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVR
        ME + L+   +R+A          EEEE ++ME FFALVRNFKEMRD+RRKELMIG   E+  AAE R++KMKT   VE+RS WIP+FEREDFDEEFQVR
Subjt:  MENEKLQPPRERIAKE--------EEEEVVEMERFFALVRNFKEMRDRRRKELMIG--EEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVR

Query:  GPALILPKPCNLVKEDTAA---AMKKKTKKVRNGDDCLDLNLAL
        GPA          KE+ AA   A  KK KKV+N +D LDLNL+L
Subjt:  GPALILPKPCNLVKEDTAA---AMKKKTKKVRNGDDCLDLNLAL

A0A6J1JVD5 uncharacterized protein LOC1114881892.2e-3568.42Show/hide
Query:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKPC
        MEN+K QPPRE IA+EEEEE VEME+F+ALVRNFKE+RDR RKE++ GE +E AAEK RK+MKT E V+++S+WI +FEREDFDE+ QV G A+ LPK C
Subjt:  MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKPC

Query:  NLVKEDT--AAAMKKKTKKVRNGDDCLDLNLAL
         LVKEDT  AAA  KK KKV +G DCLDLNL+L
Subjt:  NLVKEDT--AAAMKKKTKKVRNGDDCLDLNLAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02450.1 NIM1-interacting 11.2e-0431.9Show/hide
Query:  EEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKPCNLVKEDTAAAMKKKT
        EEEEE  +++ FF L+++++E R RRR+EL         AE      + +   E     +P F+ EDF +      P L+     +  +E+T    ++  
Subjt:  EEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKPCNLVKEDTAAAMKKKT

Query:  KKVRNGDDCLDLNLAL
         + RN D  LDLNLAL
Subjt:  KKVRNGDDCLDLNLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACGAAAAACTGCAGCCGCCGCGGGAGAGGATCGCCAAGGAGGAGGAGGAGGAGGTGGTGGAGATGGAGAGGTTTTTCGCTTTGGTGAGGAATTTCAAGGAAAT
GCGTGATCGGCGGAGGAAGGAATTGATGATCGGCGAGGAGGAGGAAATCGCGGCGGAGAAGAGAAGGAAGAAGATGAAGACGGCGGAAGCTGTGGAGCATCGGTCGACTT
GGATTCCAAAGTTCGAGAGAGAGGATTTCGATGAGGAATTTCAGGTGAGAGGACCGGCTTTGATTCTTCCGAAGCCTTGTAATCTTGTTAAAGAAGACACCGCGGCGGCG
ATGAAGAAGAAGACAAAGAAAGTGAGAAATGGAGATGATTGTTTGGATCTTAATCTCGCTCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACGAAAAACTGCAGCCGCCGCGGGAGAGGATCGCCAAGGAGGAGGAGGAGGAGGTGGTGGAGATGGAGAGGTTTTTCGCTTTGGTGAGGAATTTCAAGGAAAT
GCGTGATCGGCGGAGGAAGGAATTGATGATCGGCGAGGAGGAGGAAATCGCGGCGGAGAAGAGAAGGAAGAAGATGAAGACGGCGGAAGCTGTGGAGCATCGGTCGACTT
GGATTCCAAAGTTCGAGAGAGAGGATTTCGATGAGGAATTTCAGGTGAGAGGACCGGCTTTGATTCTTCCGAAGCCTTGTAATCTTGTTAAAGAAGACACCGCGGCGGCG
ATGAAGAAGAAGACAAAGAAAGTGAGAAATGGAGATGATTGTTTGGATCTTAATCTCGCTCTCTAG
Protein sequenceShow/hide protein sequence
MENEKLQPPRERIAKEEEEEVVEMERFFALVRNFKEMRDRRRKELMIGEEEEIAAEKRRKKMKTAEAVEHRSTWIPKFEREDFDEEFQVRGPALILPKPCNLVKEDTAAA
MKKKTKKVRNGDDCLDLNLAL