; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G025640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G025640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein TAB2 homolog, chloroplastic
Genome locationchr02:32120543..32123042
RNA-Seq ExpressionLsi02G025640
SyntenyLsi02G025640
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR009472 - Tab2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10428.1 DUF1092 domain-containing protein [Cucumis melo var. makuwa]3.0e-20494.46Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD
        MATLSFNPTRIRTL GLHF KSK  S PFSQSIKTANRFSA+GRI+QQPLRRF+SNSVSESSVSVPEEVEL ED DDPTLE+AYLD ETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSL+LQYTKYFPNNVINSITLRDAIS+I EELGVPLPEK RFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGE+WAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+ID+KTMIPGLSVATSRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_004135937.1 protein TAB2 homolog, chloroplastic [Cucumis sativus]1.2e-20293.67Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD
        MATLSFNPTRIRTLGGLHF KSK    PFSQSIKTANRFSA+GRI+QQPL RFRSNSVSESSV+ PEEVEL ED DDPTLE+AYLD ETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDA+S+I EELGVPLP+KIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGE+WAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGIEID+KTMIPGLSVATSRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRA LILSVGIATRYVYATYKKTPVT+AEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_008461309.1 PREDICTED: uncharacterized protein LOC103499936 [Cucumis melo]3.5e-20594.99Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD
        MATLSFNPTRIRTL GLHF KSK  S PFSQSIKTANRFSA+GRI+QQPLRRF+SNSVSESSVSVPEEVEL ED DDPTLE+AYLD ETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDAIS+I EELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGE+WAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+ID+KTMIPGLSVATSRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_022959769.1 protein TAB2 homolog, chloroplastic [Cucurbita moschata]1.2e-19792.13Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVE--LKEDVDDPTLELAYLDPETDPESITEWE
        MATLSFNPTRIRT GGLH  K K  SLPFSQSIKT  RFSA  RINQQ LRRFRSNSVSESS+SVPEEVE  + ED DDPTLELAYLD ETDPESITEWE
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVE--LKEDVDDPTLELAYLDPETDPESITEWE

Query:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE
        LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIS+ITEELGVPLPEKIRFFRSQMQTIITKACTELG+KPIPSKRCLSLLLWLEE
Subjt:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE

Query:  RYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNG
        RYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGE+WAFVQLPFSAVQEEVSNL  +FMFGSSLDLDLLGIEID+ TMIPGLSVA+SRAQPLAAWMNG
Subjt:  RYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNG

Query:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        MEVYSVEADTSRACLILSVGI+TRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_038900264.1 protein TAB2 homolog, chloroplastic [Benincasa hispida]4.0e-20997.36Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD
        MATLSFNPTRIRTLGGLHF KSK SS PFSQSIKT NRFSASGRINQQPLRRFRSNSVSESSVS PEEVEL ED DDPTLELAYLD  TDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIS+ITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

TrEMBL top hitse value%identityAlignment
A0A0A0K8A7 Uncharacterized protein6.0e-20393.67Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD
        MATLSFNPTRIRTLGGLHF KSK    PFSQSIKTANRFSA+GRI+QQPL RFRSNSVSESSV+ PEEVEL ED DDPTLE+AYLD ETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDA+S+I EELGVPLP+KIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGE+WAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGIEID+KTMIPGLSVATSRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRA LILSVGIATRYVYATYKKTPVT+AEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A1S3CEE7 uncharacterized protein LOC1034999361.7e-20594.99Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD
        MATLSFNPTRIRTL GLHF KSK  S PFSQSIKTANRFSA+GRI+QQPLRRF+SNSVSESSVSVPEEVEL ED DDPTLE+AYLD ETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDAIS+I EELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGE+WAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+ID+KTMIPGLSVATSRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A5A7UYM5 DUF1092 domain-containing protein1.7e-20594.99Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD
        MATLSFNPTRIRTL GLHF KSK  S PFSQSIKTANRFSA+GRI+QQPLRRF+SNSVSESSVSVPEEVEL ED DDPTLE+AYLD ETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDAIS+I EELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGE+WAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+ID+KTMIPGLSVATSRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A5D3CGT0 DUF1092 domain-containing protein1.4e-20494.46Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD
        MATLSFNPTRIRTL GLHF KSK  S PFSQSIKTANRFSA+GRI+QQPLRRF+SNSVSESSVSVPEEVEL ED DDPTLE+AYLD ETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSL+LQYTKYFPNNVINSITLRDAIS+I EELGVPLPEK RFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGE+WAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+ID+KTMIPGLSVATSRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A6J1H921 protein TAB2 homolog, chloroplastic5.8e-19892.13Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVE--LKEDVDDPTLELAYLDPETDPESITEWE
        MATLSFNPTRIRT GGLH  K K  SLPFSQSIKT  RFSA  RINQQ LRRFRSNSVSESS+SVPEEVE  + ED DDPTLELAYLD ETDPESITEWE
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVE--LKEDVDDPTLELAYLDPETDPESITEWE

Query:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE
        LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIS+ITEELGVPLPEKIRFFRSQMQTIITKACTELG+KPIPSKRCLSLLLWLEE
Subjt:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE

Query:  RYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNG
        RYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGE+WAFVQLPFSAVQEEVSNL  +FMFGSSLDLDLLGIEID+ TMIPGLSVA+SRAQPLAAWMNG
Subjt:  RYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNG

Query:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        MEVYSVEADTSRACLILSVGI+TRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

SwissProt top hitse value%identityAlignment
B4FTR7 Protein TAB2 homolog, chloroplastic1.5e-13768.67Show/hide
Query:  RRFRSNSVSESSVS---VPEEVELKEDVDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIS
        R   S S +E+S +     EEVE +  V DP  E+ YLDP+ DPESI EWELDFCSRPILD RGKKVWELV CD +LSLQ+T+YFPNN INS+TLRDA++
Subjt:  RRFRSNSVSESSVS---VPEEVELKEDVDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIS

Query:  AITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAV
        +++E LGVP+P+++RFFRSQMQTIIT+AC +LG+K +PS+RC+SLLLWLEERYE VY+RHPGFQ G++PLLALDNPFP  LPENLFG+KWAFVQLPFSAV
Subjt:  AITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAV

Query:  QEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKA
        +EEV +L+  + FG+ LDL+LLG E+D+ T++PG++V +SRA+PLAAWMNG+E+ ++EADT RA LILS G++TRYVY+ Y+KT  +T EAEAWEAAKKA
Subjt:  QEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKA

Query:  CGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        CGGLHFLAIQ++L+S+ CVGFWLLLDLPPPPV
Subjt:  CGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Q6K9C1 Protein TAB2 homolog, chloroplastic6.8e-13567.36Show/hide
Query:  RFRSNSVSESSVSVPEEVELKEDVD---------DPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITL
        R RS S   S+ +  +  + +E+V          DP  E+ YLDPE D E I EWELDFCSRPILD RGKKVWELV CD +LSLQ+T++FPN  INS+TL
Subjt:  RFRSNSVSESSVSVPEEVELKEDVD---------DPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITL

Query:  RDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQL
        RDA++++   LGVPLP++ RFFRSQMQTII++AC ELG+K +PS+RC+SLLLWLEERYETVY+RHPGFQ G+KPLL LDNPFP  LPENLFG+KWAFVQL
Subjt:  RDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQL

Query:  PFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWE
        PFSAV+EEV +L+  + FG+ LDLDLLG E+DE T+IPG++V +SRA+PLAAWMNG+E+ S+E DT RA LILS G++TRYVYA Y+K+  TT EAEAWE
Subjt:  PFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWE

Query:  AAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        AAKKACGGLHFLAIQ++L+S+ CVGFWLLLDLPPPPV
Subjt:  AAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Q9SFB3 Protein TAB2 homolog, chloroplastic7.4e-15873.49Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDV--DDPTLELAYLDPETDPESITEWE
        MATL FN  RI+T       K       F++ IKT + FS+   + +    RF S S+ ESS+S+ +E E+  +V  DDPT EL+YLDPE+D +SI EWE
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDV--DDPTLELAYLDPETDPESITEWE

Query:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE
        LDFCSRPILD RGKK+WELV CD SLSLQ TKYFPNNVINSITL+DAI  IT++LGVPLPEKIRFFRSQMQTIITKAC EL IK +PSKRCLSL LWL+E
Subjt:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE

Query:  RYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNG
        RY+TVYTRHPGFQKGS PLL+LDNPFPM LPENLFGEKWAFVQLP+SAV+EE+S+  E F+FG+SLDLDLLGIE+DE T+IPGLSVATSRA+PLAAWMNG
Subjt:  RYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNG

Query:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        +EV S+EAD+S+ CLILSVGIATRYVYATYKKTPVTT EAEAWE+AKK  GGLHFLAIQDDLDS+DCVGFWLL+DLPPPPV
Subjt:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Arabidopsis top hitse value%identityAlignment
AT3G08010.1 RNA binding5.3e-15973.49Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDV--DDPTLELAYLDPETDPESITEWE
        MATL FN  RI+T       K       F++ IKT + FS+   + +    RF S S+ ESS+S+ +E E+  +V  DDPT EL+YLDPE+D +SI EWE
Subjt:  MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDV--DDPTLELAYLDPETDPESITEWE

Query:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE
        LDFCSRPILD RGKK+WELV CD SLSLQ TKYFPNNVINSITL+DAI  IT++LGVPLPEKIRFFRSQMQTIITKAC EL IK +PSKRCLSL LWL+E
Subjt:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE

Query:  RYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNG
        RY+TVYTRHPGFQKGS PLL+LDNPFPM LPENLFGEKWAFVQLP+SAV+EE+S+  E F+FG+SLDLDLLGIE+DE T+IPGLSVATSRA+PLAAWMNG
Subjt:  RYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNG

Query:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        +EV S+EAD+S+ CLILSVGIATRYVYATYKKTPVTT EAEAWE+AKK  GGLHFLAIQDDLDS+DCVGFWLL+DLPPPPV
Subjt:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCTTAAGCTTCAACCCCACCAGAATAAGAACCCTAGGTGGACTTCATTTTAGAAAATCCAAACATAGTTCGTTGCCATTTTCACAATCGATCAAAACCGCAAA
CAGATTCTCAGCCAGTGGCCGTATCAATCAGCAACCACTACGGCGTTTTCGATCAAATTCTGTATCGGAAAGCTCGGTTTCGGTGCCGGAAGAGGTGGAATTGAAAGAGG
ATGTGGATGACCCGACCTTGGAGTTGGCCTATTTGGATCCGGAAACCGATCCGGAGAGCATTACGGAGTGGGAGCTAGATTTCTGCTCCAGACCTATTTTGGATATCAGA
GGGAAGAAGGTGTGGGAGCTTGTAGCCTGTGATAATTCGCTCTCGCTTCAATACACGAAGTATTTTCCTAACAATGTTATTAATAGCATTACTTTGAGAGACGCGATTTC
CGCAATCACTGAAGAGTTGGGGGTACCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATCATTACAAAAGCATGTACCGAGCTTGGCATAAAGCCCA
TTCCTAGTAAAAGGTGTCTTTCCCTGCTTTTGTGGCTGGAAGAGCGATACGAGACCGTTTATACACGTCATCCAGGTTTTCAGAAAGGATCTAAGCCCCTCCTTGCATTA
GATAATCCATTTCCAATGGAACTTCCAGAGAATCTTTTCGGGGAGAAGTGGGCATTTGTCCAATTGCCTTTTTCAGCTGTTCAAGAGGAGGTATCAAACTTAAAGGAAAC
TTTCATGTTTGGTTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATTGATGAGAAGACAATGATCCCAGGGTTGTCTGTTGCAACTTCACGAGCTCAACCATTGGCAG
CTTGGATGAATGGAATGGAAGTATATTCAGTCGAAGCTGATACGTCTCGTGCTTGTTTGATTCTATCCGTCGGGATCGCAACTCGATATGTCTACGCTACTTATAAAAAA
ACACCAGTGACAACTGCTGAGGCCGAAGCTTGGGAAGCAGCCAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAAGACGACTTGGATTCAGAGGACTGTGTTGG
ATTCTGGCTTCTACTAGACTTGCCGCCACCACCAGTATAA
mRNA sequenceShow/hide mRNA sequence
TAAAGGTTGAGAATTGAGAGAGCCCAAGAAAACACAAATTTCCTGAAAGGATATTTTGTGGCGGAAAAATAACTAACAAAACTGGCTCTCTCTCTGTCTCAACTCACAAA
GCTTATCTTACTGAGGGAGCTCCTCTTCAATGGCGACCTTAAGCTTCAACCCCACCAGAATAAGAACCCTAGGTGGACTTCATTTTAGAAAATCCAAACATAGTTCGTTG
CCATTTTCACAATCGATCAAAACCGCAAACAGATTCTCAGCCAGTGGCCGTATCAATCAGCAACCACTACGGCGTTTTCGATCAAATTCTGTATCGGAAAGCTCGGTTTC
GGTGCCGGAAGAGGTGGAATTGAAAGAGGATGTGGATGACCCGACCTTGGAGTTGGCCTATTTGGATCCGGAAACCGATCCGGAGAGCATTACGGAGTGGGAGCTAGATT
TCTGCTCCAGACCTATTTTGGATATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCCTGTGATAATTCGCTCTCGCTTCAATACACGAAGTATTTTCCTAACAATGTTATT
AATAGCATTACTTTGAGAGACGCGATTTCCGCAATCACTGAAGAGTTGGGGGTACCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATCATTACAAA
AGCATGTACCGAGCTTGGCATAAAGCCCATTCCTAGTAAAAGGTGTCTTTCCCTGCTTTTGTGGCTGGAAGAGCGATACGAGACCGTTTATACACGTCATCCAGGTTTTC
AGAAAGGATCTAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTTCCAGAGAATCTTTTCGGGGAGAAGTGGGCATTTGTCCAATTGCCTTTTTCAGCTGTT
CAAGAGGAGGTATCAAACTTAAAGGAAACTTTCATGTTTGGTTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATTGATGAGAAGACAATGATCCCAGGGTTGTCTGT
TGCAACTTCACGAGCTCAACCATTGGCAGCTTGGATGAATGGAATGGAAGTATATTCAGTCGAAGCTGATACGTCTCGTGCTTGTTTGATTCTATCCGTCGGGATCGCAA
CTCGATATGTCTACGCTACTTATAAAAAAACACCAGTGACAACTGCTGAGGCCGAAGCTTGGGAAGCAGCCAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAA
GACGACTTGGATTCAGAGGACTGTGTTGGATTCTGGCTTCTACTAGACTTGCCGCCACCACCAGTATAATCGGTGAAGTTCCCCCCCCCCCCCCCCCCCCCCCCCCC
Protein sequenceShow/hide protein sequence
MATLSFNPTRIRTLGGLHFRKSKHSSLPFSQSIKTANRFSASGRINQQPLRRFRSNSVSESSVSVPEEVELKEDVDDPTLELAYLDPETDPESITEWELDFCSRPILDIR
GKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISAITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLAL
DNPFPMELPENLFGEKWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGMEVYSVEADTSRACLILSVGIATRYVYATYKK
TPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV