; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G025720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G025720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr02:32168608..32172317
RNA-Seq ExpressionLsi02G025720
SyntenyLsi02G025720
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014245.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-15487.34Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL
        MPSKPENVDQQ+ DG++YL+QSTKYSE WW+GVGNN IAGE+A KT+SAEYLN TV+SG TQSQANDENIGKEVQH+KYIPFS SPPV E LDLNSQMEL
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYC ML S GPQST PHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL
        SGGRFLNTKKPN+VISNT+REE INSGANH TKP  EAGSKYMV DENGIKDTL+EE +EFMTQN+QIT AFFNGK + HG+STY SQLADVEGGHLDQ 
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

XP_004135933.1 nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus]1.2e-16191.17Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL
        MPS+PENVDQQVADGA+YLLQSTK+SEPWWHGVGNNTIAGE+AAKTSSAEYLNVTV SGATQ QANDENIGKEVQH+KYIPFSTSPPV EHLDLNSQMEL
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYC ML SYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL
        SGGRFLNTKKPN+V+SNTNREEDI+S ANH TKP SEA SKYMVT+E GIK+TLDE+ REFMTQNMQITHAFFNGKS+VHGLSTY+SQL DVEGGHLDQ 
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL

Query:  HESMQVNGAPQRAIPIK
        HESMQVNGAPQRAIPIK
Subjt:  HESMQVNGAPQRAIPIK

XP_008461297.1 PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo]5.2e-16291.17Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL
        MPS+PENVDQQVAD A+YLLQS+KYSEPWWHGVGNNTIAGE+AAKTSSAEYLNVTV SGATQ QANDENIGKEVQH+KYIPFSTSPPV EHLDLNSQMEL
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYC ML SYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL
        SGGRFLNTKKPN+V+SNTNREEDINSGANH TKP SE GSKYMVT E GIK+TLDE+ RE MTQNMQITHAFFNGKS+VHGLSTYNSQL DVEGGHLD  
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL

Query:  HESMQVNGAPQRAIPIK
        HESMQVNGAPQRAIPIK
Subjt:  HESMQVNGAPQRAIPIK

XP_023547827.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo]8.1e-15587.34Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL
        MPSKPENVDQQ+ DG++YL+QSTKYSE WWHGVGNNTIAGE+A KT+SA+YLN TV+SG TQSQANDENIGKEVQH+KYIPFSTSPPV E LDLNSQMEL
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYC ML S GPQST PHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL
        SGGRFLNTKKPN+VISNT+REE INSG NH TKP +EAGSKYM  DENGIKDTL+EE +EFMTQN+QIT AFFNGK + HG+STY SQLADVEGGHLDQ 
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

XP_038899773.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]1.2e-15891.46Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL
        MPSKPENVDQQVADGA+YLLQSTKYSEPWWHGVGNNTI GE+AAKTSSAEYLNVTVTSGATQSQANDENIGKEVQH+KYIPFSTSPPV EHLD NSQMEL
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY  ML SYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL
        SGGRFLNTKKPN+VISNTNREEDINS ANH TKP S A  KY V DEN IKDTL+ EGRE M  NMQITHAFFNGKS+VHGLSTYNSQLADVEGGHLDQ 
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

TrEMBL top hitse value%identityAlignment
A0A0A0K612 Nuclear transcription factor Y subunit5.6e-16291.17Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL
        MPS+PENVDQQVADGA+YLLQSTK+SEPWWHGVGNNTIAGE+AAKTSSAEYLNVTV SGATQ QANDENIGKEVQH+KYIPFSTSPPV EHLDLNSQMEL
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYC ML SYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL
        SGGRFLNTKKPN+V+SNTNREEDI+S ANH TKP SEA SKYMVT+E GIK+TLDE+ REFMTQNMQITHAFFNGKS+VHGLSTY+SQL DVEGGHLDQ 
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL

Query:  HESMQVNGAPQRAIPIK
        HESMQVNGAPQRAIPIK
Subjt:  HESMQVNGAPQRAIPIK

A0A1S3CED9 Nuclear transcription factor Y subunit2.5e-16291.17Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL
        MPS+PENVDQQVAD A+YLLQS+KYSEPWWHGVGNNTIAGE+AAKTSSAEYLNVTV SGATQ QANDENIGKEVQH+KYIPFSTSPPV EHLDLNSQMEL
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYC ML SYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL
        SGGRFLNTKKPN+V+SNTNREEDINSGANH TKP SE GSKYMVT E GIK+TLDE+ RE MTQNMQITHAFFNGKS+VHGLSTYNSQL DVEGGHLD  
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL

Query:  HESMQVNGAPQRAIPIK
        HESMQVNGAPQRAIPIK
Subjt:  HESMQVNGAPQRAIPIK

A0A5D3CGW1 Nuclear transcription factor Y subunit2.5e-16291.17Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL
        MPS+PENVDQQVAD A+YLLQS+KYSEPWWHGVGNNTIAGE+AAKTSSAEYLNVTV SGATQ QANDENIGKEVQH+KYIPFSTSPPV EHLDLNSQMEL
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYC ML SYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL
        SGGRFLNTKKPN+V+SNTNREEDINSGANH TKP SE GSKYMVT E GIK+TLDE+ RE MTQNMQITHAFFNGKS+VHGLSTYNSQL DVEGGHLD  
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL

Query:  HESMQVNGAPQRAIPIK
        HESMQVNGAPQRAIPIK
Subjt:  HESMQVNGAPQRAIPIK

A0A6J1GNB7 Nuclear transcription factor Y subunit1.3e-15386.71Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL
        MPSKPENVDQQ+ DG++YL+QSTKYS  WW+GVGNNTIAGE+A KT+SA+YLN TV+SG TQSQ NDENIGKEVQH+KYIPFS SPPV E LDLNSQMEL
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYC ML S GPQST PHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL
        SGGRFLNTKKPN+VISNT+REE INSGANH TKP SEAGSKYM  DENGIKDTL+EE +EFMTQN+QIT AFFNGK + HG+STY SQLADVEGGHLDQ 
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

A0A6J1JW53 Nuclear transcription factor Y subunit2.8e-15386.71Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL
        MPSKPENVDQQ  DG++YL+QSTKYSE WWHGVGNNTIAGE A KT+S +YLN TV+SG TQSQANDENIGKEVQH+KYIPFSTSPPV E LDLNSQMEL
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYC ML S GPQST PHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL
        SGGRFLNTKKPN+VISNT+RE+ IN GANH TKP +EAGSKYMV DENGIKDTL+EE +EFMTQN+QIT AFFNGK + HG+STY SQLADVEG HLDQ 
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-74.3e-2650Show/hide
Query:  HSIVLTSYPFSDAQYCPMLASYGPQSTLPH--IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +S+    YP+ D  Y  + A      T  H  + G+    +PLP +  EEPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG
Subjt:  HSIVLTSYPFSDAQYCPMLASYGPQSTLPH--IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS
         GGRFLN KK +    +++ EE  N  A       S   S
Subjt:  SGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS

Q8VY64 Nuclear transcription factor Y subunit A-41.9e-2644.89Show/hide
Query:  SQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNS-QMELVGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIY--------GLHHARMPLPLEMEEEPVY
        S  N+ +  KE    +  P   S   SE +D NS   E + H +    YP+ D  Y  + A    Q+ LPH Y        G+    +PL  +  EEPV+
Subjt:  SQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNS-QMELVGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIY--------GLHHARMPLPLEMEEEPVY

Query:  VNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGAN
        VNAKQYHGILRRRQSRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N    +   EE+  S  N
Subjt:  VNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGAN

Q945M9 Nuclear transcription factor Y subunit A-99.0e-3239.92Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWH--GVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSP-PVSEHLDLNSQ
        M SK ++   +V       + S+  S   WH      N  +  EA   SS        ++G+      D  + KE Q       +TSP    ++ D N +
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWH--GVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSP-PVSEHLDLNSQ

Query:  M------------ELVGHSI-VLTSYPFSDAQYCPMLASYG--PQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR
                     +LVGH++   +S P+ D  Y  ++ +YG  P   +P+  G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSR
Subjt:  M------------ELVGHSI-VLTSYPFSDAQYCPMLASYG--PQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR

Query:  KPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS
        KPYLHESRH HAMRR RG+GGRF   KK N+  S    EE  N    H T+  S + S
Subjt:  KPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS

Q9LXV5 Nuclear transcription factor Y subunit A-11.7e-3037.72Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT----VTSGATQSQANDENIG--KEVQ------HVKYIPFST
        M SKP   +++  +    + Q   Y+EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q       V       
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT----VTSGATQSQANDENIG--KEVQ------HVKYIPFST

Query:  SPPVSEHLDLNSQ-----MELVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK
        + P     +++ Q      ELVGH I     P+ D  Y  ++ +YG Q     P++ G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+K
Subjt:  SPPVSEHLDLNSQ-----MELVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK

Query:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG
        VI+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED       +    + +GS+ + TD N   +TL+  G
Subjt:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG

Q9M9X4 Nuclear transcription factor Y subunit A-21.3e-2536.19Show/hide
Query:  WWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHL---------DLNSQMELVGHS--IVLTSYPFSDAQY
        WW   G+  +A E  A  S + +  V V S     Q     + K+     ++ FS     S  L          + S    +G S   + T YP+ + QY
Subjt:  WWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHL---------DLNSQMELVGHS--IVLTSYPFSDAQY

Query:  CPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNS
          ++++YG QS            +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLHA+RR RGSGGRFLNTK  N 
Subjt:  CPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNS

Query:  VISNTN-REEDINSGANHKTKP-DSEAGSKYMVTDENG---IKDTLDEEGREFMTQN
          S TN ++ D +     + KP  S + +  +V  ENG   + + L+  G E  + N
Subjt:  VISNTN-REEDINSGANHKTKP-DSEAGSKYMVTDENG---IKDTLDEEGREFMTQN

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A96.4e-3339.92Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWH--GVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSP-PVSEHLDLNSQ
        M SK ++   +V       + S+  S   WH      N  +  EA   SS        ++G+      D  + KE Q       +TSP    ++ D N +
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWWH--GVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSP-PVSEHLDLNSQ

Query:  M------------ELVGHSI-VLTSYPFSDAQYCPMLASYG--PQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR
                     +LVGH++   +S P+ D  Y  ++ +YG  P   +P+  G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSR
Subjt:  M------------ELVGHSI-VLTSYPFSDAQYCPMLASYG--PQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR

Query:  KPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS
        KPYLHESRH HAMRR RG+GGRF   KK N+  S    EE  N    H T+  S + S
Subjt:  KPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS

AT5G12840.1 nuclear factor Y, subunit A11.2e-3137.72Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT----VTSGATQSQANDENIG--KEVQ------HVKYIPFST
        M SKP   +++  +    + Q   Y+EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q       V       
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT----VTSGATQSQANDENIG--KEVQ------HVKYIPFST

Query:  SPPVSEHLDLNSQ-----MELVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK
        + P     +++ Q      ELVGH I     P+ D  Y  ++ +YG Q     P++ G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+K
Subjt:  SPPVSEHLDLNSQ-----MELVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK

Query:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG
        VI+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED       +    + +GS+ + TD N   +TL+  G
Subjt:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG

AT5G12840.2 nuclear factor Y, subunit A12.7e-3137.86Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT----VTSGATQSQANDENIG--KEVQHV------KYIPFST
        M SKP   +++  +    + Q   Y+EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q         +     
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT----VTSGATQSQANDENIG--KEVQHV------KYIPFST

Query:  SPPVS----EHLDLNSQMELVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV
         P +S        L    ELVGH I     P+ D  Y  ++ +YG Q     P++ G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  SPPVS----EHLDLNSQMELVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG
        I+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED       +    + +GS+ + TD N   +TL+  G
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG

AT5G12840.3 nuclear factor Y, subunit A11.2e-3137.72Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT----VTSGATQSQANDENIG--KEVQ------HVKYIPFST
        M SKP   +++  +    + Q   Y+EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q       V       
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT----VTSGATQSQANDENIG--KEVQ------HVKYIPFST

Query:  SPPVSEHLDLNSQ-----MELVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK
        + P     +++ Q      ELVGH I     P+ D  Y  ++ +YG Q     P++ G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+K
Subjt:  SPPVSEHLDLNSQ-----MELVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK

Query:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG
        VI+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED       +    + +GS+ + TD N   +TL+  G
Subjt:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG

AT5G12840.4 nuclear factor Y, subunit A12.7e-3137.86Show/hide
Query:  MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT----VTSGATQSQANDENIG--KEVQHV------KYIPFST
        M SKP   +++  +    + Q   Y+EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q         +     
Subjt:  MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT----VTSGATQSQANDENIG--KEVQHV------KYIPFST

Query:  SPPVS----EHLDLNSQMELVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV
         P +S        L    ELVGH I     P+ D  Y  ++ +YG Q     P++ G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  SPPVS----EHLDLNSQMELVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG
        I+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED       +    + +GS+ + TD N   +TL+  G
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCAAAACCAGAAAATGTAGACCAACAAGTAGCTGATGGGGCGCAGTATTTGCTACAATCGACTAAATACTCTGAGCCTTGGTGGCATGGAGTCGGGAACAATAC
CATCGCAGGTGAAGAAGCTGCTAAAACATCTTCTGCAGAATACCTGAACGTCACTGTTACCAGTGGAGCAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAG
TCCAGCATGTCAAGTACATTCCGTTTTCTACATCCCCACCCGTGAGCGAACACCTGGATCTAAATTCCCAAATGGAACTTGTAGGCCACTCCATTGTTTTGACATCATAT
CCTTTTTCAGATGCACAATATTGTCCAATGCTGGCTTCTTATGGACCACAATCAACGTTACCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAAT
GGAAGAAGAGCCCGTTTATGTAAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGGGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGC
CATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAGTGTTATTTCCAATACAAATAGG
GAGGAAGACATCAATTCGGGTGCAAACCATAAGACAAAACCTGACAGCGAGGCTGGATCGAAGTACATGGTGACTGACGAAAATGGAATCAAGGATACACTCGATGAGGA
GGGCAGAGAGTTCATGACTCAAAATATGCAGATAACACATGCTTTCTTCAACGGAAAATCGAGTGTCCATGGTTTATCTACATACAATTCACAACTTGCTGATGTCGAGG
GAGGGCATCTCGATCAGCTACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGAGCCATCCCCATCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATTTTGCTCCTCTCCTTTTTTTATTTCCTTCTCTCTGTCATCTTCCACTGGCACTGCAGAGAGAGAGGGAGAGGGAGAGGGAGAAAGAGAGAGAGTAATGGAACTGAGCT
AGAAAGCCAGAGCGACCTTGAAGCTAAAGCTCCCTAGGGTTCGATCGTCTGTTTCATAATCACACGACAGTTGATAGGTTTTGAACGATGCCATCAAAACCAGAAAATGT
AGACCAACAAGTAGCTGATGGGGCGCAGTATTTGCTACAATCGACTAAATACTCTGAGCCTTGGTGGCATGGAGTCGGGAACAATACCATCGCAGGTGAAGAAGCTGCTA
AAACATCTTCTGCAGAATACCTGAACGTCACTGTTACCAGTGGAGCAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAGTCCAGCATGTCAAGTACATTCCG
TTTTCTACATCCCCACCCGTGAGCGAACACCTGGATCTAAATTCCCAAATGGAACTTGTAGGCCACTCCATTGTTTTGACATCATATCCTTTTTCAGATGCACAATATTG
TCCAATGCTGGCTTCTTATGGACCACAATCAACGTTACCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAGCCCGTTTATGTAA
ACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGGGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACAC
CTCCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAGTGTTATTTCCAATACAAATAGGGAGGAAGACATCAATTCGGGTGC
AAACCATAAGACAAAACCTGACAGCGAGGCTGGATCGAAGTACATGGTGACTGACGAAAATGGAATCAAGGATACACTCGATGAGGAGGGCAGAGAGTTCATGACTCAAA
ATATGCAGATAACACATGCTTTCTTCAACGGAAAATCGAGTGTCCATGGTTTATCTACATACAATTCACAACTTGCTGATGTCGAGGGAGGGCATCTCGATCAGCTACAT
GAAAGCATGCAGGTGAATGGGGCTCCACAGAGAGCCATCCCCATCAAATGAAAGTTTCTTGATGGGGAATGGGGCTTCTCCAACACTGTTTAACCAGTTTCAGTGCAGAA
AACTTGAATATTCAGTAAGTATGACTGTTGATTCTTGTGAGGCTCTGTTACTGGTTGGCAGTTGAAGGATTTGCCCCCTTTCTGCTTGGAAGAAAACTGCCTTTTGGTGG
TGTTTCTCAGGCAATTCATTCTTGGCTTTAGTTGGTACTCTGAGGTGAGATGGAAGAAGATGAAGAAATGCAGTGCACCAAAGAATGTGGTACACTCACTGCCTATTTCT
TTCCTCTTCAATTAATTACCTCTTCTATTACTACGTATGTAGTTCTTCTAATCCTGAATGTGTGTCTCATAAAAACAAAAAAACATTTAAGTGTGCAGACTTTTTATAAC
TTAATTTAGGTGCAATTGGGTGTTGTATCTATTCAACTTTGTGTGAATGTTTCAGGTGATATATCTTTTCATGTTTGGTGGACTTGCAGACATTAAATATGGAACCTCTC
TTTCACCTTCCCTCACTCTCTCCCCCACACACTAGGAGGGTAGATGTCTTAATTTTATAATATTTAGTGAAGACCTCATTATCCTATGACTTA
Protein sequenceShow/hide protein sequence
MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSY
PFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNR
EEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQLHESMQVNGAPQRAIPIK