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Lsi02G025790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G025790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionInterferon-activable protein
Genome locationchr02:32245764..32246812
RNA-Seq ExpressionLsi02G025790
SyntenyLsi02G025790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058633.1 uncharacterized protein E6C27_scaffold339G001020 [Cucumis melo var. makuwa]5.5e-2195.83Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
        MEPAKVDWKN+QWRFVEDELYEHINAPKWVDFTAIHD VDDEAWFCRP
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
TYK10441.1 uncharacterized protein E5676_scaffold459G00880 [Cucumis melo var. makuwa]5.5e-2195.83Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
        MEPAKVDWKN+QWRFVEDELYEHINAPKWVDFTAIHD VDDEAWFCRP
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
XP_004135929.1 uncharacterized protein LOC101206114 [Cucumis sativus]5.5e-2195.83Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
        MEPAKVDWKN+QWRFVEDELYEHINAPKWVDFTAIHD VDDEAWFCRP
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
XP_008461285.2 PREDICTED: uncharacterized protein LOC103499920 [Cucumis melo]5.5e-2195.83Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
        MEPAKVDWKN+QWRFVEDELYEHINAPKWVDFTAIHD VDDEAWFCRP
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
XP_038897334.1 uncharacterized protein LOC120085449 [Benincasa hispida]1.5e-2197.92Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
        MEPAKVDWKN+QWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
TrEMBL top hitse value%identityAlignment
A0A0A0K6K5 Uncharacterized protein2.7e-2195.83Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
        MEPAKVDWKN+QWRFVEDELYEHINAPKWVDFTAIHD VDDEAWFCRP
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
A0A1S3CFK8 uncharacterized protein LOC1034999202.7e-2195.83Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
        MEPAKVDWKN+QWRFVEDELYEHINAPKWVDFTAIHD VDDEAWFCRP
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
A0A5A7URW6 Uncharacterized protein2.7e-2195.83Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
        MEPAKVDWKN+QWRFVEDELYEHINAPKWVDFTAIHD VDDEAWFCRP
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
A0A5D3CF96 Uncharacterized protein2.7e-2195.83Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
        MEPAKVDWKN+QWRFVEDELYEHINAPKWVDFTAIHD VDDEAWFCRP
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRP
A0A6J1D4X1 uncharacterized protein LOC1110173176.6e-2091.49Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCR
        MEPAK+DWKN+QWRFVEDELYEHINAPKWVDFTAIHD VDD+AWFCR
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52110.1 unknown protein1.4e-1464Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTA--IHDSVDDEAWFCRP
        MEPA +DWK +  RFVED  YEHI APKW DF A    DS+DD+AWFC+P
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTA--IHDSVDDEAWFCRP
AT3G52110.2 unknown protein1.4e-1464Show/hide
Query:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTA--IHDSVDDEAWFCRP
        MEPA +DWK +  RFVED  YEHI APKW DF A    DS+DD+AWFC+P
Subjt:  MEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTA--IHDSVDDEAWFCRP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGAAAAGAAAAACTCTCCAACGGTCAGAACCGGCAAGCTGCCCACAAAAACGTTCACAAAAAACGTAGAGAAATTCTCCAGCACAACGGTCACTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCGGCTTCTCCACTCTTCATCTTCTCGAGCCCGATAATGGAACCAGCAAAAGTCGACTGGAAAAATCTGCAGTGGAGATTCGTAGAGGACGAAT
TGTACGAGCACATTAACGCCCCCAAATGGGTTGATTTCACCGCGATCCACGACTCCGTGGATGATGAGGCCTGGTTTTGTCGACCCGGTGAGATTCTCTTTTGCTCGATC
GATCTCTGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCGAAAAGAAAAACTCTCCAACGGTCAGAACCGGCAAGCTGCCCACAAAAACGTTCACAAAAAACGTAGAGAAATTCTCCAGCACAACGGTCACTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCGGCTTCTCCACTCTTCATCTTCTCGAGCCCGATAATGGAACCAGCAAAAGTCGACTGGAAAAATCTGCAGTGGAGATTCGTAGAGGACGAAT
TGTACGAGCACATTAACGCCCCCAAATGGGTTGATTTCACCGCGATCCACGACTCCGTGGATGATGAGGCCTGGTTTTGTCGACCCGGTGAGATTCTCTTTTGCTCGATC
GATCTCTGTTCTTGA
Protein sequenceShow/hide protein sequence
MREKKNSPTVRTGKLPTKTFTKNVEKFSSTTVTSSSSSSSSSSASPLFIFSSPIMEPAKVDWKNLQWRFVEDELYEHINAPKWVDFTAIHDSVDDEAWFCRPGEILFCSI
DLCS