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Lsi02G026130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G026130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionADP-ribosylation factor
Genome locationchr02:32540863..32543426
RNA-Seq ExpressionLsi02G026130
SyntenyLsi02G026130
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR006689 - Small GTPase superfamily, ARF/SAR type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8055018.1 hypothetical protein GUJ93_ZPchr0001g33131 [Zizania palustris]2.7e-1254.79Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTKVKNNLPNLNMKSL
        W     + IR LW HYFQNTQGLIFVVDSNDR+ VVEARDELHR LNE+++         + +N+ +L++ SL
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTKVKNNLPNLNMKSL

PIA38009.1 hypothetical protein AQUCO_02900094v1 [Aquilegia coerulea]4.2e-1366.67Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTK
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE+I  + + +CT+
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTK

RRT41873.1 hypothetical protein B296_00020385 [Ensete ventricosum]7.2e-1372.22Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAY
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE++  AY
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAY

RYQ89432.1 hypothetical protein Ahy_B09g096084 isoform A [Arachis hypogaea]1.6e-1272.22Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAY
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE+I  +Y
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAY

XP_022870886.1 ADP-ribosylation factor 1-like [Olea europaea var. sylvestris]7.2e-1363.24Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE---LIFGAYSTSCTKVKNNL
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE   LI+  Y + C  + N L
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE---LIFGAYSTSCTKVKNNL

TrEMBL top hitse value%identityAlignment
A0A2G5D3B3 Uncharacterized protein2.0e-1366.67Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTK
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE+I  + + +CT+
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTK

A0A426XQR8 Uncharacterized protein3.5e-1372.22Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAY
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE++  AY
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAY

A0A444XI55 Uncharacterized protein7.8e-1372.22Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAY
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE+I  +Y
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAY

A0A6N2KVN4 LRRNT_2 domain-containing protein1.2e-1344.63Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTKVKNNLPNLNMKSLFQISVFTPTALDGHNKVGVVHQHLVAT
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE   G  +T C   K +LPN    ++    +     L    +     Q   AT
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTKVKNNLPNLNMKSLFQISVFTPTALDGHNKVGVVHQHLVAT

Query:  FNTPSRKKFSIDMMSHHTCAL
             R  F ID+   HT  +
Subjt:  FNTPSRKKFSIDMMSHHTCAL

A0A6N2KXU2 LRRNT_2 domain-containing protein1.2e-1344.63Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTKVKNNLPNLNMKSLFQISVFTPTALDGHNKVGVVHQHLVAT
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE   G  +T C   K +LPN    ++    +     L    +     Q   AT
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTKVKNNLPNLNMKSLFQISVFTPTALDGHNKVGVVHQHLVAT

Query:  FNTPSRKKFSIDMMSHHTCAL
             R  F ID+   HT  +
Subjt:  FNTPSRKKFSIDMMSHHTCAL

SwissProt top hitse value%identityAlignment
O23778 ADP-ribosylation factor 15.2e-1477.08Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE

P0DH91 ADP-ribosylation factor 2-B5.2e-1477.08Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE

P36397 ADP-ribosylation factor 15.2e-1477.08Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE

P51822 ADP-ribosylation factor 15.2e-1477.08Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE

Q9LQC8 ADP-ribosylation factor 2-A5.2e-1477.08Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE

Arabidopsis top hitse value%identityAlignment
AT1G10630.1 ADP-ribosylation factor A1F3.7e-1577.08Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE

AT1G23490.1 ADP-ribosylation factor 13.7e-1577.08Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE

AT1G70490.1 Ras-related small GTP-binding family protein3.7e-1577.08Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE

AT1G70490.2 Ras-related small GTP-binding family protein3.7e-1577.08Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE

AT1G70490.3 Ras-related small GTP-binding family protein3.7e-1577.08Show/hide
Query:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE
        W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Subjt:  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGACAGCTGTTCCACGGTCAAAGTCAAATGCGCTTCAGAGAGGGGTTTCGCGCCAATTCTCAGTCGGAAGTGTAACTGCCGGCGCCAATCGTCTCTGGGGGACAAA
TGAAGCAGTTGCTCTTGATGAAGAAATTGATTGGGCAACGGAAGACTGGTGTGATTCCAACCCTAACGCAATTCGTCTCTTGTGGATGCACTACTTCCAGAACACACAGG
GTCTCATATTTGTTGTTGATAGCAATGATAGAGATGGAGTTGTTGAGGCCAGGGATGAATTGCATAGGAAATTGAATGAGTTGATATTTGGTGCTTATTCAACTTCGTGC
ACAAAAGTTAAGAACAACCTACCAAACTTGAACATGAAATCATTATTTCAGATTAGTGTATTCACACCTACTGCTTTGGATGGACATAATAAAGTTGGGGTCGTCCACCA
ACATCTGGTTGCAACTTTCAACACTCCATCACGTAAGAAATTTTCAATTGACATGATGAGCCACCATACGTGCGCCCTAAGTTCTAACTGGAATTACAATTTTGGTATTG
CTGTGGTCCTAATAAGGTTAGGTTCTCATGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGACAGCTGTTCCACGGTCAAAGTCAAATGCGCTTCAGAGAGGGGTTTCGCGCCAATTCTCAGTCGGAAGTGTAACTGCCGGCGCCAATCGTCTCTGGGGGACAAA
TGAAGCAGTTGCTCTTGATGAAGAAATTGATTGGGCAACGGAAGACTGGTGTGATTCCAACCCTAACGCAATTCGTCTCTTGTGGATGCACTACTTCCAGAACACACAGG
GTCTCATATTTGTTGTTGATAGCAATGATAGAGATGGAGTTGTTGAGGCCAGGGATGAATTGCATAGGAAATTGAATGAGTTGATATTTGGTGCTTATTCAACTTCGTGC
ACAAAAGTTAAGAACAACCTACCAAACTTGAACATGAAATCATTATTTCAGATTAGTGTATTCACACCTACTGCTTTGGATGGACATAATAAAGTTGGGGTCGTCCACCA
ACATCTGGTTGCAACTTTCAACACTCCATCACGTAAGAAATTTTCAATTGACATGATGAGCCACCATACGTGCGCCCTAAGTTCTAACTGGAATTACAATTTTGGTATTG
CTGTGGTCCTAATAAGGTTAGGTTCTCATGCTTAA
Protein sequenceShow/hide protein sequence
MWTAVPRSKSNALQRGVSRQFSVGSVTAGANRLWGTNEAVALDEEIDWATEDWCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSC
TKVKNNLPNLNMKSLFQISVFTPTALDGHNKVGVVHQHLVATFNTPSRKKFSIDMMSHHTCALSSNWNYNFGIAVVLIRLGSHA