; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G026200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G026200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEcotropic viral integration site protein
Genome locationchr02:32642226..32643021
RNA-Seq ExpressionLsi02G026200
SyntenyLsi02G026200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014211.1 hypothetical protein SDJN02_24386 [Cucurbita argyrosperma subsp. argyrosperma]5.5e-4392.86Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE---LEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASV
        QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   LEIAKELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTADIWMPVITASADERR FTASV
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE---LEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASV

Query:  EENSETKENCAS
         ENSET+ENC S
Subjt:  EENSETKENCAS

XP_004135903.1 uncharacterized protein LOC101220647 [Cucumis sativus]1.7e-4495.41Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN
        QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFT SV EN
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN

Query:  SETKENCAS
        SET+ NC S
Subjt:  SETKENCAS

XP_022953424.1 uncharacterized protein LOC111455983 [Cucurbita moschata]1.3e-4495.41Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN
        QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTADIWMPVITASADERR FTASV EN
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN

Query:  SETKENCAS
        SET+ENC S
Subjt:  SETKENCAS

XP_022991943.1 uncharacterized protein LOC111488434 [Cucurbita maxima]8.5e-4495.33Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN
        QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI+KELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTADIWMPVITASADERR FTASV EN
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN

Query:  SETKENC
        SET+ENC
Subjt:  SETKENC

XP_038899531.1 uncharacterized protein LOC120086812 [Benincasa hispida]7.0e-4696.33Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN
        QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTAS+ EN
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN

Query:  SETKENCAS
        SET+ENCA+
Subjt:  SETKENCAS

TrEMBL top hitse value%identityAlignment
A0A0A0KBJ8 Uncharacterized protein8.3e-4595.41Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN
        QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFT SV EN
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN

Query:  SETKENCAS
        SET+ NC S
Subjt:  SETKENCAS

A0A1S3CEA0 uncharacterized protein LOC1034998867.8e-4392.66Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN
        QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMA+DPQVQSLLSDTADIWMPVITASADERRNFT+SV EN
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN

Query:  SETKENCAS
         ET+ N  S
Subjt:  SETKENCAS

A0A5A7UWV6 Uncharacterized protein7.8e-4392.66Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN
        QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMA+DPQVQSLLSDTADIWMPVITASADERRNFT+SV EN
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN

Query:  SETKENCAS
         ET+ N  S
Subjt:  SETKENCAS

A0A6J1GPL7 uncharacterized protein LOC1114559836.4e-4595.41Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN
        QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTADIWMPVITASADERR FTASV EN
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN

Query:  SETKENCAS
        SET+ENC S
Subjt:  SETKENCAS

A0A6J1JXP7 uncharacterized protein LOC1114884344.1e-4495.33Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN
        QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI+KELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTADIWMPVITASADERR FTASV EN
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN

Query:  SETKENC
        SET+ENC
Subjt:  SETKENC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44360.1 unknown protein5.3e-3677.45Show/hide
Query:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN
        QVESLTN EEVELR+KIEALGLEVTKVPSKS + L+E+EIAKELDKLS KLD+VDEMISSA+A+DPQVQ+LLS TAD+WMPVITA A+ER NFTAS+ ++
Subjt:  QVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASVEEN

Query:  SE
         +
Subjt:  SE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTATTTGTTTCACCCATTGTTTAACACATTGTAATTTGCAGGTGGAATCACTTACCAACCAGGAAGAAGTCGAATTGCGTACAAAGATTGAAGCCCTTGGACTTGA
AGTTACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTTGATGAACTGGAAATTGCCAAGGAGTTGGATAAGCTATCTGAAAAACTAGATAATGTGGATGAAATGATTTCTT
CAGCAATGGCTGCAGATCCACAGGTGCAGTCTCTGTTGAGTGATACTGCTGATATTTGGATGCCAGTGATAACTGCTTCGGCTGATGAACGGCGAAATTTTACAGCTTCA
GTTGAAGAAAATTCAGAAACAAAAGAGAATTGTGCCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTATTTGTTTCACCCATTGTTTAACACATTGTAATTTGCAGGTGGAATCACTTACCAACCAGGAAGAAGTCGAATTGCGTACAAAGATTGAAGCCCTTGGACTTGA
AGTTACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTTGATGAACTGGAAATTGCCAAGGAGTTGGATAAGCTATCTGAAAAACTAGATAATGTGGATGAAATGATTTCTT
CAGCAATGGCTGCAGATCCACAGGTGCAGTCTCTGTTGAGTGATACTGCTGATATTTGGATGCCAGTGATAACTGCTTCGGCTGATGAACGGCGAAATTTTACAGCTTCA
GTTGAAGAAAATTCAGAAACAAAAGAGAATTGTGCCAGTTAGAAAATTCAGAAACAAAAGGGATAAGTAATTTCAATTCTCTATCATAATTTTGTTATGTTTGATGAAGA
ATGTGTTCTAATGCTAGCATTTACAATGGTTGGAATGTATTTTTCCAAAGGTGCCATCTTGTCTGTAGAAATCCTTCATAATTGTCTAAAGATAAATCTTACGAAGCTTT
TTTTTTTTTATTAAATTGATGTGAAGATAAATAAATATGCTAATCTGATATATGCCCTTTTCTTTTTTTCCTTCAAAAAACAATTTTTTGTTTGTATGACACTAAGTTTA
C
Protein sequenceShow/hide protein sequence
MFICFTHCLTHCNLQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTAS
VEENSETKENCAS