; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G026280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G026280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:32703182..32703655
RNA-Seq ExpressionLsi02G026280
SyntenyLsi02G026280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646415.1 hypothetical protein Csa_016003 [Cucumis sativus]6.2e-5580.92Show/hide
Query:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN
        MGSESISHK HYDISMSKRTRKPAKIQDELQ L +N+DDL ++G GD+         EINNDHKSLKQLI+GEGKAE +SDEGNR RNSLGQHFS+EEIN
Subjt:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN

Query:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG---DQHQLMKKQIRKKSFL
        NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG    QHQLMKK IRKKSFL
Subjt:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG---DQHQLMKKQIRKKSFL

XP_008461224.1 PREDICTED: uncharacterized protein LOC103499874 [Cucumis melo]5.2e-5480.13Show/hide
Query:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN
        MGSESISHK HYDISMSKRTRKPAKIQDELQN  S +D L+++  GDR ES        NNDHKSLKQLI+GEGKAET+ DEGNR RNSLGQHFS+EEIN
Subjt:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN

Query:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG--DQHQLMKKQIRKKSFL
        NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG   QHQLMKK  RKKSFL
Subjt:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG--DQHQLMKKQIRKKSFL

XP_011659480.2 uncharacterized protein LOC105436185 [Cucumis sativus]6.6e-5780.38Show/hide
Query:  FPFGKQMGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHF
        F F KQMGSESISHK HYDISMSKRTRKPAKIQDELQ L +N+DDL ++G GD+         EINNDHKSLKQLI+GEGKAE +SDEGNR RNSLGQHF
Subjt:  FPFGKQMGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHF

Query:  SEEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG---DQHQLMKKQIRKKSFL
        S+EEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG    QHQLMKK IRKKSFL
Subjt:  SEEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG---DQHQLMKKQIRKKSFL

XP_023004344.1 uncharacterized protein LOC111497689 [Cucurbita maxima]9.2e-5178.95Show/hide
Query:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETK--SDEGNRGRNSLGQHFSEEE
        M SESISHKH+YDISMSKRTRKPAKIQDELQNL  NN+DLN V N D+F SPTTKGFE NN+HKSLKQL+N E KAET+   DEG+RGRNSLGQHFS+EE
Subjt:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETK--SDEGNRGRNSLGQHFSEEE

Query:  IN-NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGGDQHQLMKKQIRKKSFL
        +N NLQIVKKQH+DGLQGVKLKKVVG FLR+LIKGGD+HQL  K+  KKSFL
Subjt:  IN-NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGGDQHQLMKKQIRKKSFL

XP_038896195.1 uncharacterized protein LOC120084478 [Benincasa hispida]7.0e-6791.33Show/hide
Query:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN
        MGSESISHKHHYDISMSKRTRKPAKIQDELQNLA NNDDLNV+G GDRFESP TKGFEI ND KSL+QLINGEGK ET+SDEGNRGRNSLGQHFS+EEIN
Subjt:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN

Query:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIK-GGDQHQLMKKQIRKKSFL
        NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIK GGDQHQLMKK IRKK FL
Subjt:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIK-GGDQHQLMKKQIRKKSFL

TrEMBL top hitse value%identityAlignment
A0A0A0KBK8 Uncharacterized protein3.0e-5580.92Show/hide
Query:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN
        MGSESISHK HYDISMSKRTRKPAKIQDELQ L +N+DDL ++G GD+         EINNDHKSLKQLI+GEGKAE +SDEGNR RNSLGQHFS+EEIN
Subjt:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN

Query:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG---DQHQLMKKQIRKKSFL
        NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG    QHQLMKK IRKKSFL
Subjt:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG---DQHQLMKKQIRKKSFL

A0A1S3CFF2 uncharacterized protein LOC1034998742.5e-5480.13Show/hide
Query:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN
        MGSESISHK HYDISMSKRTRKPAKIQDELQN  S +D L+++  GDR ES        NNDHKSLKQLI+GEGKAET+ DEGNR RNSLGQHFS+EEIN
Subjt:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN

Query:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG--DQHQLMKKQIRKKSFL
        NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG   QHQLMKK  RKKSFL
Subjt:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG--DQHQLMKKQIRKKSFL

A0A5A7US55 Uncharacterized protein2.5e-5480.13Show/hide
Query:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN
        MGSESISHK HYDISMSKRTRKPAKIQDELQN  S +D L+++  GDR ES        NNDHKSLKQLI+GEGKAET+ DEGNR RNSLGQHFS+EEIN
Subjt:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEIN

Query:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG--DQHQLMKKQIRKKSFL
        NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG   QHQLMKK  RKKSFL
Subjt:  NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG--DQHQLMKKQIRKKSFL

A0A6J1H8U7 uncharacterized protein LOC1114606911.7e-5081.12Show/hide
Query:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETK--SDEGNRGRNSLGQHFSEEE
        M SESISHKH+YDISMSKRTRKPAKIQDELQNL  NN+DLN V N DRF SPTTKGFE NN+HKSLKQL+N E KAET+   DEG RGRNSLGQHFS+EE
Subjt:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETK--SDEGNRGRNSLGQHFSEEE

Query:  IN-NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGGDQHQLMK
        +N NLQIVKKQH+DGLQGVKLKKVVG FLR+LIKGGD+HQL K
Subjt:  IN-NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGGDQHQLMK

A0A6J1KW04 uncharacterized protein LOC1114976894.5e-5178.95Show/hide
Query:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETK--SDEGNRGRNSLGQHFSEEE
        M SESISHKH+YDISMSKRTRKPAKIQDELQNL  NN+DLN V N D+F SPTTKGFE NN+HKSLKQL+N E KAET+   DEG+RGRNSLGQHFS+EE
Subjt:  MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETK--SDEGNRGRNSLGQHFSEEE

Query:  IN-NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGGDQHQLMKKQIRKKSFL
        +N NLQIVKKQH+DGLQGVKLKKVVG FLR+LIKGGD+HQL  K+  KKSFL
Subjt:  IN-NLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGGDQHQLMKKQIRKKSFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31930.1 unknown protein5.3e-0430.82Show/hide
Query:  MGSESIS-HKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINN---DHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSE
        MGSE ++  K  +D+SMSKRTRKP        +   N+   + +        P  +  +I +   D KSL  L+  + K   ++D  N  ++SL QHF +
Subjt:  MGSESIS-HKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINN---DHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSE

Query:  EE--INNLQIVKKQHQDGLQGVKLKKVVGKFLR---NLIKGGDQHQ
         E     +Q+V K+ + G  G+K K +VG++++    LIK    H+
Subjt:  EE--INNLQIVKKQHQDGLQGVKLKKVVGKFLR---NLIKGGDQHQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTTCCATTTGGGAAGCAAATGGGGAGTGAGAGCATATCTCATAAACACCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGA
GCTTCAAAATCTCGCGTCGAACAATGACGATCTTAATGTCGTCGGTAACGGGGATCGATTCGAGAGCCCTACAACAAAAGGGTTTGAGATCAACAACGACCATAAAAGCT
TAAAACAACTCATCAATGGCGAAGGGAAAGCGGAAACGAAGTCGGACGAGGGCAACCGAGGAAGGAACTCGCTCGGCCAACACTTTAGTGAAGAAGAGATCAACAATCTT
CAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTGGTTGGAAAATTTTTGAGAAACTTGATCAAAGGTGGTGATCAACACCAGCTGAT
GAAGAAGCAAATTAGAAAGAAGTCATTTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTTCCATTTGGGAAGCAAATGGGGAGTGAGAGCATATCTCATAAACACCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGA
GCTTCAAAATCTCGCGTCGAACAATGACGATCTTAATGTCGTCGGTAACGGGGATCGATTCGAGAGCCCTACAACAAAAGGGTTTGAGATCAACAACGACCATAAAAGCT
TAAAACAACTCATCAATGGCGAAGGGAAAGCGGAAACGAAGTCGGACGAGGGCAACCGAGGAAGGAACTCGCTCGGCCAACACTTTAGTGAAGAAGAGATCAACAATCTT
CAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTGGTTGGAAAATTTTTGAGAAACTTGATCAAAGGTGGTGATCAACACCAGCTGAT
GAAGAAGCAAATTAGAAAGAAGTCATTTCTCTGA
Protein sequenceShow/hide protein sequence
MAFPFGKQMGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEINNL
QIVKKQHQDGLQGVKLKKVVGKFLRNLIKGGDQHQLMKKQIRKKSFL