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Lsi02G026360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G026360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description4-coumarate:CoA ligase
Genome locationchr02:32784508..32784900
RNA-Seq ExpressionLsi02G026360
SyntenyLsi02G026360
Gene Ontology termsGO:0016405 - CoA-ligase activity (molecular function)
InterPro domainsIPR025110 - AMP-binding enzyme, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058680.1 4-coumarate--CoA ligase 1-like [Cucumis melo var. makuwa]9.6e-2791.78Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        MPDVEAGE+PVAFVVKAN   ITEEEVKQFITKQVVFYKRLKRVFFVN IPKAPSGKILRKELRAKLA GAYN
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

KAA0058682.1 4-coumarate--CoA ligase 1-like [Cucumis melo var. makuwa]4.3e-2793.15Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        MPDVEAGEVPVAFVVKAN   ITEEEVKQFITKQVVFYKRLKRVFFVN IPKAPSGKILRKELRAKLA GAYN
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

XP_004135893.3 4-coumarate--CoA ligase 2 [Cucumis sativus]8.7e-2894.52Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        MPDVEAGEVPVAFVVKAN   ITEEEVKQFITKQVVFYKRLKRVFFVN IPKAPSGKILRKELRAKLASGAYN
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

XP_008461216.1 PREDICTED: 4-coumarate--CoA ligase 1-like [Cucumis melo]4.3e-2793.15Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        MPDVEAGEVPVAFVVKAN   ITEEEVKQFITKQVVFYKRLKRVFFVN IPKAPSGKILRKELRAKLA GAYN
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

XP_038897021.1 4-coumarate--CoA ligase 1-like [Benincasa hispida]4.3e-2791.78Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        MPDVEAGEVPVAFVVK N   ITEEEVKQFI+KQVVFYKRLKRVFFVNTIPKAPSGKILRKELRA+LASGAYN
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

TrEMBL top hitse value%identityAlignment
A0A0A0K658 Uncharacterized protein4.2e-2894.52Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        MPDVEAGEVPVAFVVKAN   ITEEEVKQFITKQVVFYKRLKRVFFVN IPKAPSGKILRKELRAKLASGAYN
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

A0A0A0K8H9 Uncharacterized protein1.0e-2690.41Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        MPDVEAGEVPVAFV+KAN   I+EEEVKQFI KQVVFYKRLKRVFFVN IPKAPSGKILRKELRAKLASGAYN
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

A0A1S3CE71 4-coumarate--CoA ligase 1-like2.1e-2793.15Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        MPDVEAGEVPVAFVVKAN   ITEEEVKQFITKQVVFYKRLKRVFFVN IPKAPSGKILRKELRAKLA GAYN
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

A0A5A7US61 4-coumarate--CoA ligase 1-like2.1e-2793.15Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        MPDVEAGEVPVAFVVKAN   ITEEEVKQFITKQVVFYKRLKRVFFVN IPKAPSGKILRKELRAKLA GAYN
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

A0A5A7UUG4 4-coumarate--CoA ligase 1-like4.6e-2791.78Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        MPDVEAGE+PVAFVVKAN   ITEEEVKQFITKQVVFYKRLKRVFFVN IPKAPSGKILRKELRAKLA GAYN
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

SwissProt top hitse value%identityAlignment
I3PB37 4-coumarate:CoA ligase 13.9e-2371.23Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        M D +AGEVPVAFVV++N S ITE+EVK F++KQV+FYKR+KRVFFV T+PK+PSGKILRK+LRA+LA+G  N
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

O24145 4-coumarate--CoA ligase 12.3e-2372.6Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        M D +AGEVPVAFVV++N S ITE+EVK FI+KQV+FYKR+KRVFFV T+PK+PSGKILRK+LRA+LA+G  N
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

O24146 4-coumarate--CoA ligase 22.3e-2373.97Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        M D +AGEVPVAFVV++N S ITE+EVK FI+KQV+FYKR+KRVFFV+ IPK+PSGKILRK+LRAKLA+G  N
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

P31684 4-coumarate--CoA ligase 13.0e-2372.6Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        M D +AGEVPVAFVV++N S ITE+EVK FI+KQV+FYKR+KRVFFV T+PK+PSGKILRK+LRA+LA+G  N
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

P31685 4-coumarate--CoA ligase 23.0e-2372.6Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        M D +AGEVPVAFVV++N S ITE+EVK FI+KQV+FYKR+KRVFFV T+PK+PSGKILRK+LRA+LA+G  N
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

Arabidopsis top hitse value%identityAlignment
AT1G51680.1 4-coumarate:CoA ligase 14.4e-2270Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASG
        M +  AGEVPVAFVVK+ DS ++E++VKQF++KQVVFYKR+ +VFF  +IPKAPSGKILRK+LRAKLA+G
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASG

AT1G65060.1 4-coumarate:CoA ligase 39.3e-2070.77Show/hide
Query:  DVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKL
        D  AGEVPVAFVV++N + ITEE+VK+++ KQVVFYKRL +VFFV +IPK+PSGKILRK+L+AKL
Subjt:  DVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKL

AT3G21230.1 4-coumarate:CoA ligase 59.6e-1762.69Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKL
        M D  A EVPVAFV ++  S +TE++VK ++ KQVV YKR+K VFF+  IPKA SGKILRK+LRAKL
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKL

AT3G21240.1 4-coumarate:CoA ligase 26.9e-2367.12Show/hide
Query:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN
        M + +AGEVPVAFVV++ DS I+E+E+KQF++KQVVFYKR+ +VFF ++IPKAPSGKILRK+LRA+LA+G  N
Subjt:  MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN

AT4G05160.1 AMP-dependent synthetase and ligase family protein1.4e-1555.88Show/hide
Query:  PDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLAS
        PD EAGEVP+AFVV++ +S ITE+++++FI KQV  YKRL+RV F++ +PK+ +GKILR+EL  ++ S
Subjt:  PDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGATGTGGAGGCGGGAGAAGTGCCGGTGGCGTTTGTGGTGAAGGCGAATGACAGCATAATAACAGAGGAAGAAGTAAAGCAATTCATAACAAAACAAGTGGTGTT
CTACAAGAGGCTAAAACGTGTGTTTTTCGTCAACACTATTCCAAAGGCTCCGTCAGGCAAAATCCTTAGAAAAGAACTCAGAGCAAAACTGGCTTCTGGTGCTTACAATT
AA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGATGTGGAGGCGGGAGAAGTGCCGGTGGCGTTTGTGGTGAAGGCGAATGACAGCATAATAACAGAGGAAGAAGTAAAGCAATTCATAACAAAACAAGTGGTGTT
CTACAAGAGGCTAAAACGTGTGTTTTTCGTCAACACTATTCCAAAGGCTCCGTCAGGCAAAATCCTTAGAAAAGAACTCAGAGCAAAACTGGCTTCTGGTGCTTACAATT
AAACTCCTAAATTGCTCATTTATTGTCACCACCGTAAATTGATATCATTTTTTAAAAAGAAAAAAAAATTAAGATGATGTACCATATTACTATTTGATATGTATTATTCA
AAGTGTTTGTGAATTGTTTTATAATCTTTTAATAGAGAAAATATGCTAAATATTTGAATCTAA
Protein sequenceShow/hide protein sequence
MPDVEAGEVPVAFVVKANDSIITEEEVKQFITKQVVFYKRLKRVFFVNTIPKAPSGKILRKELRAKLASGAYN