; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G026540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G026540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:32979865..32980823
RNA-Seq ExpressionLsi02G026540
SyntenyLsi02G026540
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058699.1 hypothetical protein E6C27_scaffold339G001690 [Cucumis melo var. makuwa]4.2e-4595.1Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLK
        LTEE+GSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTL+QRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFGLTG QKAQCQLELAKTS+AKGKLK
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLK

Query:  IL
        IL
Subjt:  IL

KAE8646426.1 hypothetical protein Csa_016913 [Cucumis sativus]2.7e-4495.1Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLK
        LTEE GSC MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFGLTG QKAQC LELAKTSMAKGKLK
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLK

Query:  IL
        IL
Subjt:  IL

KAG6593358.1 hypothetical protein SDJN03_12834, partial [Cucurbita argyrosperma subsp. sororia]3.3e-4291.67Show/hide
Query:  RTTLGLTEEVGSCNMVLDSVLSSPHRRSPSFRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSM
        R  + LTEEVGSCNMVLDSVLSSPHRRSPSFRK+F PNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLG SSSC GLTGAQKAQCQLELAKTSM
Subjt:  RTTLGLTEEVGSCNMVLDSVLSSPHRRSPSFRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSM

Query:  AKGKLKIL
        AKGKLKIL
Subjt:  AKGKLKIL

KAG7025704.1 hypothetical protein SDJN02_12202, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-4295.15Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKL
        LTEEVGSCNMVLDSVLSSPHRRSPSFRK+F PNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLG SSSC GLTGAQKAQCQLELAKTSMAKGKL
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKL

Query:  KIL
        KIL
Subjt:  KIL

XP_011659492.1 uncharacterized protein LOC101216292 [Cucumis sativus]9.1e-4096.77Show/hide
Query:  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFGLTG QKAQC LELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLKIL

TrEMBL top hitse value%identityAlignment
A0A0A0K6S1 Uncharacterized protein1.3e-4495.1Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLK
        LTEE GSC MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFGLTG QKAQC LELAKTSMAKGKLK
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLK

Query:  IL
        IL
Subjt:  IL

A0A1S4E387 uncharacterized protein LOC1034998511.7e-3994.62Show/hide
Query:  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKSFPNELGSWSTL+QRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSC+GLTG QKAQCQLELAKTS+AKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLKIL

A0A5D3CG60 Uncharacterized protein2.0e-4595.1Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLK
        LTEE+GSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTL+QRHRFLLTAL LLTFLCTIYLYFAVTLGSSSSCFGLTG QKAQCQLELAKTS+AKGKLK
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLK

Query:  IL
        IL
Subjt:  IL

A0A6J1H8Z6 uncharacterized protein LOC1114607221.3e-3694.68Show/hide
Query:  MVLDSVLSSPHRRSPSFRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRK+F PNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLG SSSC GLTGAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLKIL

A0A6J1KRB5 uncharacterized protein LOC1114979671.7e-3693.62Show/hide
Query:  MVLDSVLSSPHRRSPSFRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRK+F PNELGSWSTL+QRHRFLLTAL LLTFLCTIYLYFAVTLG SSSC GLTGAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLKIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16170.1 unknown protein5.1e-2565.22Show/hide
Query:  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGS-SSSCFGLTGAQKAQCQLELAKTSMAKGKLK
        MVLD ++SSP RR    +K + +ELGSWSTL+QRH++LLTALALL FLCT+YLYFAVTLG+  SSC+GLTG  KA CQL+L + +++KGKLK
Subjt:  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGS-SSSCFGLTGAQKAQCQLELAKTSMAKGKLK

AT1G79660.1 unknown protein5.9e-2158.7Show/hide
Query:  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSS-SCFGLTGAQKAQCQLELAKTSMAKGKLK
        MVLD ++SSP RR  + +K + ++LGS ST+VQRHRFLLTA+ LL FLCTIY+YFAVTLG+    C G+TG  KA CQ+E  + S + GKLK
Subjt:  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSS-SCFGLTGAQKAQCQLELAKTSMAKGKLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGCTCTGATCTGGCTCAACTTCTCTATCGCTCATGACTTGTATTGTATTTCTATTGACCATGACTGTTTTGGGAAGGGTCAGTTAAGTCATTCTTACGTCAGTTG
GTCATGGAAGAATAGGAGAACTACACTAGGGCTGACTGAGGAAGTTGGATCATGCAACATGGTTCTTGACAGTGTCCTTTCTTCTCCTCACAGGAGGTCTCCATCATTCC
GAAAGTCCTTTCCGAATGAGTTGGGCAGTTGGTCAACTCTCGTGCAGCGGCATCGCTTCCTCCTGACAGCACTTGCCCTCTTGACCTTTCTTTGCACAATTTACCTTTAC
TTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGACTGACTGGGGCGCAAAAAGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAA
AATTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAGCTCTGATCTGGCTCAACTTCTCTATCGCTCATGACTTGTATTGTATTTCTATTGACCATGACTGTTTTGGGAAGGGTCAGTTAAGTCATTCTTACGTCAGTTG
GTCATGGAAGAATAGGAGAACTACACTAGGGCTGACTGAGGAAGTTGGATCATGCAACATGGTTCTTGACAGTGTCCTTTCTTCTCCTCACAGGAGGTCTCCATCATTCC
GAAAGTCCTTTCCGAATGAGTTGGGCAGTTGGTCAACTCTCGTGCAGCGGCATCGCTTCCTCCTGACAGCACTTGCCCTCTTGACCTTTCTTTGCACAATTTACCTTTAC
TTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGACTGACTGGGGCGCAAAAAGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAA
AATTCTTTGATACTTGGGATTGTGCTCCAAAGCGTGTGTCTTTTGTTTGTAGTTTTCAACCATTTGGGTTGAAGACTTGAAAAAAAAGGGAAAAAAAAAATTGAAGTTAG
TCAGTTTGTTATACAAGGTTGTGTAGTAAGATGTAAGCGAACTCTCTATACAGATATCTGCGAAAAAAATGCGTTAATCAATCATTTTGTGTTTGCAGATTTATAATGTA
TATGCTCTTCAGTGCATGAAAACTAACTATGTTATCAAGCAGAAAACAAATTAATTCTTTATTTCCTAAGATTCATG
Protein sequenceShow/hide protein sequence
MLALIWLNFSIAHDLYCISIDHDCFGKGQLSHSYVSWSWKNRRTTLGLTEEVGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLY
FAVTLGSSSSCFGLTGAQKAQCQLELAKTSMAKGKLKIL