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Lsi02G026630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G026630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGAG1At protein
Genome locationchr02:33115800..33117405
RNA-Seq ExpressionLsi02G026630
SyntenyLsi02G026630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135879.1 uncharacterized protein LOC101214375 [Cucumis sativus]1.9e-3080.41Show/hide
Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
        MSGEAKSGGASGG GGFRSRMEHYLYSG+KKHVAAGIV+ GIIFGIPWALMNRG              SKH+SHQDYMERADKARSQRLSSGSSSAK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
XP_008461185.1 PREDICTED: uncharacterized protein LOC103499845 [Cucumis melo]3.2e-3080.41Show/hide
Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
        MSGEAKSGGASGG GGFRSRME+YLYSG+KKHVAAGIV+ GIIFGIPWALMNRG              SKHQSHQDYMERADKARSQRLSSGSSSAK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
XP_022953259.1 uncharacterized protein LOC111455862 [Cucurbita moschata]1.7e-3183.51Show/hide
Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
        MSGEAKSGG+ GGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRG              SKHQSHQDYMERADKARSQRLSSGSSSAK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
XP_022992483.1 uncharacterized protein LOC111488802 [Cucurbita maxima]3.8e-3182.47Show/hide
Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
        MSG+AKSGG+ GGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRG              SKHQSHQDYMERADKARSQRLSSGSSSAK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
XP_038897164.1 uncharacterized protein LOC120085312 isoform X2 [Benincasa hispida]1.5e-2779.12Show/hide
Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSS
        MSGEAK GGA+GG GGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPW LMNRG              SKHQSHQDYME+ADKARSQRLSS
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSS
TrEMBL top hitse value%identityAlignment
A0A1S3CEK3 uncharacterized protein LOC1034998451.6e-3080.41Show/hide
Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
        MSGEAKSGGASGG GGFRSRME+YLYSG+KKHVAAGIV+ GIIFGIPWALMNRG              SKHQSHQDYMERADKARSQRLSSGSSSAK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
A0A5D3CFG0 Uncharacterized protein1.6e-3080.41Show/hide
Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
        MSGEAKSGGASGG GGFRSRME+YLYSG+KKHVAAGIV+ GIIFGIPWALMNRG              SKHQSHQDYMERADKARSQRLSSGSSSAK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
A0A6J1DAT5 uncharacterized protein LOC1110189661.2e-2570.19Show/hide
Query:  MSGEAKSGGASGGGG-------GFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGS
        M GE K GGASGGGG       GFRSRMEH+LYSG+KKHVAAGI VI IIFGIPW LM+RG              SKHQSHQDYMERADKARSQRLSSGS
Subjt:  MSGEAKSGGASGGGG-------GFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGS

Query:  SSAK
        S AK
Subjt:  SSAK
A0A6J1GP50 uncharacterized protein LOC1114558628.3e-3283.51Show/hide
Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
        MSGEAKSGG+ GGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRG              SKHQSHQDYMERADKARSQRLSSGSSSAK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
A0A6J1JZC0 uncharacterized protein LOC1114888021.9e-3182.47Show/hide
Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
        MSG+AKSGG+ GGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRG              SKHQSHQDYMERADKARSQRLSSGSSSAK
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16000.1 unknown protein5.0e-2155Show/hide
Query:  MSGEAKSGG---ASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
        M  E K+ G   +  GGGGFR++MEHY+YSGEKKHV  GI ++ IIFG+PW LM +G              SKHQSHQDYM++ADKAR  RLSS SS+ K
Subjt:  MSGEAKSGG---ASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
AT1G80890.1 unknown protein7.7e-2259.79Show/hide
Query:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK
        M  E+KS   + GGGG R++MEHY+YSGEKKHV AGI +I IIFGIPW LMN+G              SKH+SHQDY+E+ADKAR  RLSS SSS K
Subjt:  MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGCGAGGCCAAAAGCGGCGGTGCGAGCGGCGGAGGAGGTGGTTTCAGATCGAGAATGGAGCACTATTTATACAGCGGCGAAAAAAAGCACGTCGCCGCTGGCAT
CGTCGTCATTGGTATCATCTTTGGCATCCCTTGGGCCCTCATGAATCGAGGGAATTCAGATATCTTTGGATTGCAACAGTGGACGTTTGGAAGATCAAAACATCAGTCTC
ATCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTTCATCATCAGCTAAATGA
mRNA sequenceShow/hide mRNA sequence
GTTTGGACACCAAAATCACTGTAACCAAACGCTCCCAAAAGGTTCACGGAGCATTGAGCAAAACTAGAAGTAGAGAACTGGAAGAACATATCATTTTGAGAGACAATCGG
CGGACAAAATGAGCGGCGAGGCCAAAAGCGGCGGTGCGAGCGGCGGAGGAGGTGGTTTCAGATCGAGAATGGAGCACTATTTATACAGCGGCGAAAAAAAGCACGTCGCC
GCTGGCATCGTCGTCATTGGTATCATCTTTGGCATCCCTTGGGCCCTCATGAATCGAGGGAATTCAGATATCTTTGGATTGCAACAGTGGACGTTTGGAAGATCAAAACA
TCAGTCTCATCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTTCATCATCAGCTAAATGATTTTTTTTTCTTTTTGGATTTCTTCTGA
TAGAGGATGTTCTTTGGGGCACTTAATTGACATAAAATTTTTGTAGTAGCTCCTTCTACATCTTGCATTTCCCCCCTCCCTCTTCTTACATTAAACAAAGACAAGTTATA
CTCACCAAGGTACACTTATGGTTATGAAATAAATGACGGATTTTTTTCTTTC
Protein sequenceShow/hide protein sequence
MSGEAKSGGASGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGNSDIFGLQQWTFGRSKHQSHQDYMERADKARSQRLSSGSSSAK