; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G026880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G026880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr02:33307817..33308546
RNA-Seq ExpressionLsi02G026880
SyntenyLsi02G026880
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593380.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.1e-7375.52Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------
        FDRM ERNSVSWM M++GYVEIGEYREAWRVF  MLR+GARPDQATFVVAFSTV WLD+L LL SLRTMAVK GYE DVLVGT++LN             
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------

Query:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
            MPEKNEYSWT+MISAFSQC++LNDAIALYERTSQ SVAIQT ++TAFA KG I +ARN FEEIV PNVV WNAMIAAYAHNGMLE+AK
Subjt:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

KAG7025727.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-7375.52Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------
        FDRM ERNSVSWM M++GYVEIGEYREAWRVF  MLR+GARPDQATFVVAFSTV WLD+L LL SLRTMAVK GYE DVLVGT++LN             
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------

Query:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
            MPEKNEYSWT+MISAFSQC++LNDAIALYERTSQ SVAIQT ++TAFA KG I +ARN FEEIV PNVV WNAMIAAYAHNGMLE+AK
Subjt:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

XP_022148556.1 pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia]7.1e-7774.87Show/hide
Query:  LLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN------
        ++     FDRMEERNSVSWM MI+GYVEIGEYREAW +F  M R+GARPDQA FVVAFSTVTWLD+LELLESLRTMAVKTGYE DVLVGTA LN      
Subjt:  LLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN------

Query:  ----------TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
                  TMPEKNEYSWT+MISAFSQC+RLNDAIALYERTS+KSVA+QTV++TAFA KG I +ARN FEEIVNPNVV WNAM+AAYAHNGML++AK
Subjt:  ----------TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

XP_023004730.1 pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima]1.3e-7576.04Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------
        FDRM ERNSVSWM M++GYVEIGEYREAWRVF  MLR+GARPDQATFVVAFSTV WLD+LELL SLRTMAVK GYE DVLVGT++LN             
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------

Query:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
            MPEKNEYSWT+MISAFSQC++LNDAIALYERTSQ+SVAIQT ++TAFAHKG I++ARN FEEIV PNVV WNAM+AAYAHNGMLE+AK
Subjt:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

XP_023515085.1 pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp. pepo]3.9e-7576.56Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------
        FDRM ERNSVSWM M++GYVEIGEYREAWRVF  MLR+GARPDQATFVVAFSTV+WLD+LELL SLRTMAVK GYE DVLVGT++LN             
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------

Query:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
            MPEKNEYSWT+MISAFSQC++LNDAIALYERTSQKSVAIQT ++TAFA KG I +ARN FEEIV PNVV WNAMIAAYAHNGMLE+AK
Subjt:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

TrEMBL top hitse value%identityAlignment
A0A2P5EWX6 DYW domain containing protein3.3e-5657.81Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------
        FD+MEERN VSWMA+++GYVEI EYREAW +F  ML +G RPDQA FVV  S  T L+++ L++ LRT++ K GYE +V VGTAVLN             
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------

Query:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
           TMPE+NEYSWT+MI+A SQC RLNDAI+LYER ++K VA +T ++TA+A  G +  AR +F++I NPNVV WNAM+A YA NGMLE+AK
Subjt:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

A0A6J1D5R5 pentatricopeptide repeat-containing protein At4g02750-like3.4e-7774.87Show/hide
Query:  LLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN------
        ++     FDRMEERNSVSWM MI+GYVEIGEYREAW +F  M R+GARPDQA FVVAFSTVTWLD+LELLESLRTMAVKTGYE DVLVGTA LN      
Subjt:  LLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN------

Query:  ----------TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
                  TMPEKNEYSWT+MISAFSQC+RLNDAIALYERTS+KSVA+QTV++TAFA KG I +ARN FEEIVNPNVV WNAM+AAYAHNGML++AK
Subjt:  ----------TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

A0A6J1HAB1 pentatricopeptide repeat-containing protein At4g02750-like3.9e-7375Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------
        FDRM ERNSVSWM M++GYV I EYREAWRVF  MLR+GARPDQATFVVAFSTV WLD+LELL +LRTMAVK GYE DVLVGT++LN             
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------

Query:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
            MPEKNEYSWT+MISAFSQC++LNDAIALYERTSQKSVAIQT ++TAFA KG I +ARN FEEIV PNVV WNAMIAAYAHNGMLE+AK
Subjt:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

A0A6J1KVF3 pentatricopeptide repeat-containing protein At4g02750-like6.5e-7676.04Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------
        FDRM ERNSVSWM M++GYVEIGEYREAWRVF  MLR+GARPDQATFVVAFSTV WLD+LELL SLRTMAVK GYE DVLVGT++LN             
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLN-------------

Query:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
            MPEKNEYSWT+MISAFSQC++LNDAIALYERTSQ+SVAIQT ++TAFAHKG I++ARN FEEIV PNVV WNAM+AAYAHNGMLE+AK
Subjt:  ---TMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

A0A7N2MWW1 Uncharacterized protein9.7e-5657.81Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNT------------
        F+ M ERNSVSWM M++G++EI EY EAW VF  M+R+G RPDQA  VVA S V  L+DLEL+E+LRT+A+KTGYE DV+VGTA+L+             
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNT------------

Query:  ----MPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
            MPE+NEYSWT+MISAF+QC+ L++AIA YER   K VA +  ++TA+A +GMI +AR++F+EI NPNVV+ NAM+AAYA NGM+E+AK
Subjt:  ----MPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

SwissProt top hitse value%identityAlignment
O64766 Pentatricopeptide repeat-containing protein At2g35030, mitochondrial3.7e-2031.75Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESL------------RTMAVKTGYERDVLVGTA--VL
        FD + ER+ V+W  +I GY+++G+ REA  +F    R  +R +  T+    S       L + E L             TM    GY +   +  A  + 
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESL------------RTMAVKTGYERDVLVGTA--VL

Query:  NTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQA
        + MPE+N  SW SM+ A  Q  R+++A+ L+ER  ++ V   T +V   A  G +D+AR +F+ +   N++ WNAMI  YA N  +++A
Subjt:  NTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQA

Q56XI1 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial9.1e-1930.9Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERD--VLVGTAVLNTMPEKNEYSWT
        FD M +RN +SW  +++GY++ GE  EA +VF  M      P++       + V+W             A+  GY  +  V V  ++   MPEKN+ SWT
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERD--VLVGTAVLNTMPEKNEYSWT

Query:  SMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
         M+  F Q  R++DA  LYE    K    +T ++     +G +D+AR +F+E+   +V+ W  M+  Y  N  ++ A+
Subjt:  SMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

Q9FI80 Pentatricopeptide repeat-containing protein At5g489105.0e-1728.57Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTA----------------
        FD+M +R+ VSW  MI+GY   G +++A  VF  M +   RP+  T V     ++ L  LEL E L   A  +G   D ++G+A                
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTA----------------

Query:  VLNTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTV----LVTAFAHKGMIDDARNMFEEIVN-----PNVVVWNAMIAAYAHNGMLEQA
        V   +P +N  +W++MI+ F+   +  DAI  + +  Q  V    V    L+TA +H G++++ R  F ++V+     P +  +  M+     +G+L++A
Subjt:  VLNTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTV----LVTAFAHKGMIDDARNMFEEIVN-----PNVVVWNAMIAAYAHNGMLEQA

Query:  KLF
        + F
Subjt:  KLF

Q9M9R6 Pentatricopeptide repeat-containing protein At1g144703.5e-1831.98Show/hide
Query:  FFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNTMPEKNEYSWTS
        +FDRM E++ VSW AM++GY + G   +A R+F  MLR G RP++ T+V+  S  ++  D  L  SL    VK   E+ V +           N +  T+
Subjt:  FFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNTMPEKNEYSWTS

Query:  MISAFSQCNRLNDAIALY-ERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNG
        ++   ++C  +  A  ++ E  +Q+++     +++ +   G +  AR +F+ +   NVV WN++IA YAHNG
Subjt:  MISAFSQCNRLNDAIALY-ERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNG

Q9XE98 Pentatricopeptide repeat-containing protein At4g043701.2e-1829.74Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTA----------------
        FD+ME+R+ VSW  MI+GY  +G   E  ++ + M  +G RPDQ TF  + S    + DLE+   L    VKTG++ D+ + TA                
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTA----------------

Query:  VLNTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQ-----KSVAIQTV----------------------------------LVTAFAHKGMIDDAR
        VL T+P K+   WT MIS   +  R   A+ ++    Q      S AI +V                                  L+T +A  G +D + 
Subjt:  VLNTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQ-----KSVAIQTV----------------------------------LVTAFAHKGMIDDAR

Query:  NMFEEIVNPNVVVWNAMIAAYAHNGMLEQAKL
         +FE +   ++V WNA+I+ YA N  L +A L
Subjt:  NMFEEIVNPNVVVWNAMIAAYAHNGMLEQAKL

Arabidopsis top hitse value%identityAlignment
AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein6.5e-2030.9Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERD--VLVGTAVLNTMPEKNEYSWT
        FD M +RN +SW  +++GY++ GE  EA +VF  M      P++       + V+W             A+  GY  +  V V  ++   MPEKN+ SWT
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERD--VLVGTAVLNTMPEKNEYSWT

Query:  SMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK
         M+  F Q  R++DA  LYE    K    +T ++     +G +D+AR +F+E+   +V+ W  M+  Y  N  ++ A+
Subjt:  SMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAK

AT1G14470.1 Pentatricopeptide repeat (PPR) superfamily protein2.5e-1931.98Show/hide
Query:  FFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNTMPEKNEYSWTS
        +FDRM E++ VSW AM++GY + G   +A R+F  MLR G RP++ T+V+  S  ++  D  L  SL    VK   E+ V +           N +  T+
Subjt:  FFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNTMPEKNEYSWTS

Query:  MISAFSQCNRLNDAIALY-ERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNG
        ++   ++C  +  A  ++ E  +Q+++     +++ +   G +  AR +F+ +   NVV WN++IA YAHNG
Subjt:  MISAFSQCNRLNDAIALY-ERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNG

AT2G35030.1 Pentatricopeptide repeat (PPR) superfamily protein2.6e-2131.75Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESL------------RTMAVKTGYERDVLVGTA--VL
        FD + ER+ V+W  +I GY+++G+ REA  +F    R  +R +  T+    S       L + E L             TM    GY +   +  A  + 
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESL------------RTMAVKTGYERDVLVGTA--VL

Query:  NTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQA
        + MPE+N  SW SM+ A  Q  R+++A+ L+ER  ++ V   T +V   A  G +D+AR +F+ +   N++ WNAMI  YA N  +++A
Subjt:  NTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQA

AT4G04370.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.5e-2029.74Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTA----------------
        FD+ME+R+ VSW  MI+GY  +G   E  ++ + M  +G RPDQ TF  + S    + DLE+   L    VKTG++ D+ + TA                
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTA----------------

Query:  VLNTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQ-----KSVAIQTV----------------------------------LVTAFAHKGMIDDAR
        VL T+P K+   WT MIS   +  R   A+ ++    Q      S AI +V                                  L+T +A  G +D + 
Subjt:  VLNTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQ-----KSVAIQTV----------------------------------LVTAFAHKGMIDDAR

Query:  NMFEEIVNPNVVVWNAMIAAYAHNGMLEQAKL
         +FE +   ++V WNA+I+ YA N  L +A L
Subjt:  NMFEEIVNPNVVVWNAMIAAYAHNGMLEQAKL

AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein3.6e-1828.57Show/hide
Query:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTA----------------
        FD+M +R+ VSW  MI+GY   G +++A  VF  M +   RP+  T V     ++ L  LEL E L   A  +G   D ++G+A                
Subjt:  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTA----------------

Query:  VLNTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTV----LVTAFAHKGMIDDARNMFEEIVN-----PNVVVWNAMIAAYAHNGMLEQA
        V   +P +N  +W++MI+ F+   +  DAI  + +  Q  V    V    L+TA +H G++++ R  F ++V+     P +  +  M+     +G+L++A
Subjt:  VLNTMPEKNEYSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTV----LVTAFAHKGMIDDARNMFEEIVN-----PNVVVWNAMIAAYAHNGMLEQA

Query:  KLF
        + F
Subjt:  KLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTATTGTCATTCTCGAATGGTTGTTGAGGCTCGCGAGCTTTTTTGATCGGATGGAGGAGCGGAATTCTGTATCGTGGATGGCTATGATAGCTGGGTATGTTGA
GATTGGTGAGTATCGAGAAGCTTGGCGTGTGTTTTTTTGGATGTTGAGGAATGGAGCGAGGCCTGATCAGGCTACATTTGTGGTTGCTTTCTCAACGGTTACTTGGTTGG
ATGATTTGGAGTTGCTTGAGAGTTTGAGAACAATGGCTGTAAAGACTGGTTATGAGAGGGATGTTCTTGTGGGGACAGCAGTTCTTAATACAATGCCGGAGAAGAATGAA
TATTCATGGACTTCTATGATCTCAGCTTTCTCTCAGTGTAATAGATTAAACGACGCCATTGCATTGTATGAGAGAACTTCTCAGAAAAGTGTTGCTATTCAAACTGTGCT
TGTTACTGCCTTTGCTCACAAGGGAATGATTGATGATGCCAGGAATATGTTTGAGGAGATTGTGAATCCCAATGTAGTTGTTTGGAATGCTATGATTGCTGCATATGCGC
ACAATGGAATGCTTGAACAAGCAAAGCTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTATTGTCATTCTCGAATGGTTGTTGAGGCTCGCGAGCTTTTTTGATCGGATGGAGGAGCGGAATTCTGTATCGTGGATGGCTATGATAGCTGGGTATGTTGA
GATTGGTGAGTATCGAGAAGCTTGGCGTGTGTTTTTTTGGATGTTGAGGAATGGAGCGAGGCCTGATCAGGCTACATTTGTGGTTGCTTTCTCAACGGTTACTTGGTTGG
ATGATTTGGAGTTGCTTGAGAGTTTGAGAACAATGGCTGTAAAGACTGGTTATGAGAGGGATGTTCTTGTGGGGACAGCAGTTCTTAATACAATGCCGGAGAAGAATGAA
TATTCATGGACTTCTATGATCTCAGCTTTCTCTCAGTGTAATAGATTAAACGACGCCATTGCATTGTATGAGAGAACTTCTCAGAAAAGTGTTGCTATTCAAACTGTGCT
TGTTACTGCCTTTGCTCACAAGGGAATGATTGATGATGCCAGGAATATGTTTGAGGAGATTGTGAATCCCAATGTAGTTGTTTGGAATGCTATGATTGCTGCATATGCGC
ACAATGGAATGCTTGAACAAGCAAAGCTTTTTTGA
Protein sequenceShow/hide protein sequence
MIGIVILEWLLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNTMPEKNE
YSWTSMISAFSQCNRLNDAIALYERTSQKSVAIQTVLVTAFAHKGMIDDARNMFEEIVNPNVVVWNAMIAAYAHNGMLEQAKLF