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Lsi02G026930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G026930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncalcineurin subunit B
Genome locationchr02:33332127..33335291
RNA-Seq ExpressionLsi02G026930
SyntenyLsi02G026930
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135865.1 calcineurin subunit B [Cucumis sativus]2.6e-4693.33Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+AFS KASVHHKIE I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGYAA
          Y A
Subjt:  SGYAA

XP_008461145.1 PREDICTED: calcineurin subunit B [Cucumis melo]9.8e-4692.38Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MG+ASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+AFS KASVHHKIE I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGYAA
          Y A
Subjt:  SGYAA

XP_022148449.1 calcineurin subunit B-like [Momordica charantia]2.8e-4591.43Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDR+AKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+AFS KAS HHKIE I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGYAA
          Y A
Subjt:  SGYAA

XP_023004288.1 calcineurin subunit B-like [Cucurbita maxima]6.3e-4590.48Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MGNASSMLTQYDIEEVQEHC+KLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+ FS KAS+HHKIE I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGYAA
          Y A
Subjt:  SGYAA

XP_038898820.1 calcineurin subunit B-like isoform X1 [Benincasa hispida]2.2e-4592.38Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+AFS KASV HKIE I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGYAA
          Y A
Subjt:  SGYAA

TrEMBL top hitse value%identityAlignment
A0A0A0KBS0 Uncharacterized protein1.2e-4693.33Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+AFS KASVHHKIE I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGYAA
          Y A
Subjt:  SGYAA

A0A1S3CEG8 calcineurin subunit B4.7e-4692.38Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MG+ASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+AFS KASVHHKIE I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGYAA
          Y A
Subjt:  SGYAA

A0A5A7UX28 Calcineurin subunit B4.7e-4692.38Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MG+ASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+AFS KASVHHKIE I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGYAA
          Y A
Subjt:  SGYAA

A0A6J1D542 calcineurin subunit B-like1.4e-4591.43Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDR+AKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+AFS KAS HHKIE I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGYAA
          Y A
Subjt:  SGYAA

A0A6J1KZ13 calcineurin subunit B-like3.1e-4590.48Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MGNASSMLTQYDIEEVQEHC+KLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+ FS KAS+HHKIE I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGYAA
          Y A
Subjt:  SGYAA

SwissProt top hitse value%identityAlignment
P0CM54 Calcineurin subunit B4.5e-0938.27Show/hide
Query:  NKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLTAFSTKASVHHKI
        N  FS  E++ L +RF +LD++  G I  DEFL +P+ A NPL+ R++ + D      ++F++FV  L+AFS+K     K+
Subjt:  NKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLTAFSTKASVHHKI

P0CM55 Calcineurin subunit B4.5e-0938.27Show/hide
Query:  NKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLTAFSTKASVHHKI
        N  FS  E++ L +RF +LD++  G I  DEFL +P+ A NPL+ R++ + D      ++F++FV  L+AFS+K     K+
Subjt:  NKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLTAFSTKASVHHKI

P42322 Calcineurin subunit B4.2e-1541.18Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLTAFSTKASVHHK
        MG  +S L   ++EE+Q+  N  F+Q+EI  LY+RF +LD++  G IS DEFL +PE A+NPL +R++ + D      +NFK+F+A L+ F+ +     K
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLTAFSTKASVHHK

Query:  IE
        +E
Subjt:  IE

P87072 Calcineurin subunit B9.9e-0932.67Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLTAFSTKASVHHK
        MGN +S +    ++ + +  N  F ++E+  L +RF +LD++  G I  +EFLS+P+ + NPL+ R++ + D      ++F++FV+ L+AFS+K +   K
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLTAFSTKASVHHK

Query:  I
        +
Subjt:  I

Q55G87 Calcineurin subunit B type 13.3e-1235.29Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLTAFSTKASVHHK
        MGN  S+L +  +E++++  N  FS+ E+  LY+RF  LD++  G ++ DEFLS+P+ A+NPL +R++++ D      + F +FV  L   S K +   K
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLTAFSTKASVHHK

Query:  IE
        ++
Subjt:  IE

Arabidopsis top hitse value%identityAlignment
AT3G18430.1 Calcium-binding EF-hand family protein2.0e-4483.5Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MGN SSMLTQYDIEEVQ HC+ LF QQEI+SLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+AFS KAS+  K++ I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGY
          Y
Subjt:  SGY

AT3G18430.2 Calcium-binding EF-hand family protein2.0e-4483.5Show/hide
Query:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE
        MGN SSMLTQYDIEEVQ HC+ LF QQEI+SLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFL+AFS KAS+  K++ I 
Subjt:  MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIE

Query:  SGY
          Y
Subjt:  SGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATGCTTCATCGATGCTCACTCAATATGATATTGAAGAAGTTCAAGAGCACTGCAATAAACTTTTCTCCCAACAGGAAATAGTGTCATTGTATCAGAGATTCTG
CCAACTTGATAGAAATGCCAAGGGGTTTATTTCAGCTGATGAGTTCCTCTCAGTTCCTGAATTTGCAATGAATCCACTTTCTCAGCGTTTGCTCAAGATGGTTGATGGCT
TGAACTTTAAGGATTTTGTGGCTTTCTTGACAGCATTCAGTACTAAAGCTAGTGTGCACCATAAGATTGAATGCATCGAGAGCGGTTACGCTGCTATTCCTGTGAAATGG
AAGAACTGCTTCTTTTGCTCTGTGCTTATATTATTTCTTTTCACCTTCATAAACGAACTACCCTGTTAG
mRNA sequenceShow/hide mRNA sequence
GTTGTTTGTTCCTCACCGTCGGCCCTACTAACATCATCGCGACTCAGAGTATTGCCTCGACAGACCATTCCATTTATAAAATTCAACTAATCTCTGTAAATTTTCATGCT
TTCCTTAACTCTGTTTTTCTTTAGGAAAAAAAATATAAACTTTTACCAGCCCACATAAATTTATCACATCTTCACCATCAAATTTCTACTCATATCGAAAATAGCGTCAA
GATTAGCGATGCCCTTGATGCTCAATTGGACAGAATCAAAGGGGAAAATCTTCGTCGCCTTCGATCACAACAAAAAAAAGAGGCAATAAAAGCTTATCTAGGCTTTTTTA
GAGTCTCGATGATGTCCAGGTGAAAGCTTCAGCGGGGTTCATTCTATTTCTATATCTGCTGTGGGTAAGTAAAAGAATACCCAATTTGGTTACTGCCCATTATCAGATCA
GCTGTGATTTTCAGATTGGTTTCTTAGTACTTTTTAGAAATTGGACATTTGGATTGAGAATTCATGGGGAATGCTTCATCGATGCTCACTCAATATGATATTGAAGAAGT
TCAAGAGCACTGCAATAAACTTTTCTCCCAACAGGAAATAGTGTCATTGTATCAGAGATTCTGCCAACTTGATAGAAATGCCAAGGGGTTTATTTCAGCTGATGAGTTCC
TCTCAGTTCCTGAATTTGCAATGAATCCACTTTCTCAGCGTTTGCTCAAGATGGTTGATGGCTTGAACTTTAAGGATTTTGTGGCTTTCTTGACAGCATTCAGTACTAAA
GCTAGTGTGCACCATAAGATTGAATGCATCGAGAGCGGTTACGCTGCTATTCCTGTGAAATGGAAGAACTGCTTCTTTTGCTCTGTGCTTATATTATTTCTTTTCACCTT
CATAAACGAACTACCCTGTTAGATCGGTCAGGAGTATAATAGTTTCTCTTTTCCCTTTGCAGCAAGTTTTGTGTCAATTATTACACGAAGCAGGCTATACAAGAAACTCT
CAGTTGACACTCGATGACTTCATAAAGGTTCTTGGTAATTCAGGCATAAAAATGGATGTAGAAGTTCCAGTTGATTAGTTGCTGATCTGTTAGGCATAAGCCTTCCAATT
TACTTTCAGAAAAAAAGTTAAACACAAAAAGTTTCAACTGCAGACACGGTGAAGTTTGTGATGTTCCATTCAGAACTTGTATCAGCATGCACACATCTGCTTCAGTCCAT
CTCTGTTACAGAGAGTTGTAATGGAAGACAAGATTTTATACTTTAATTTTCACAGACTGTCCTTTTCCTTCTTCATAATTTGTAAAGACAGTGTCAATAATGTCAATTAA
TGATTTCCTTTTGTAACTGAGATCAAATCAATGTCGACTCACAAATGTCAACGCAGACAAAATAACAAACTACATGATTTCATTGGAATATCTAACCACGATAATTTATG
AGTTTATACAGTTACAATCTGCGTAGAGCAGAGGGGAAATCAAACAAAAAAATCCTTACTCTGTTCTCAGCTTTCTCAAATTTCACCTCTATAAC
Protein sequenceShow/hide protein sequence
MGNASSMLTQYDIEEVQEHCNKLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLTAFSTKASVHHKIECIESGYAAIPVKW
KNCFFCSVLILFLFTFINELPC