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Lsi02G027160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G027160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationchr02:33492637..33493467
RNA-Seq ExpressionLsi02G027160
SyntenyLsi02G027160
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058756.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa]9.4e-4074.38Show/hide
Query:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKV--NEMKNLE-EKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE
        MA+ ISLSTSLKLA      FFSFLPP SVGLVLSR G +EGK   +EMK LE +K VIGSRPPGC+NKCM+CRPCMAA VVPVHRMKGKAFQ F +  E
Subjt:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKV--NEMKNLE-EKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE

Query:  EQDTYYLLSWKCRCGNKIYQP
        E+D+YYLLSWKC+CGNKIYQP
Subjt:  EQDTYYLLSWKCRCGNKIYQP

KAE8646441.1 hypothetical protein Csa_015844 [Cucumis sativus]4.5e-4277.69Show/hide
Query:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTE-GKV--NEMKNLEEKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE
        MA+ ISLSTSLKLA      FFSFLPP SVGLVLSR G +E GK   +EMKNLEEK VIGSRPPGCQNKCM+CRPCMAA VVPVHRMKGKAFQ F +  E
Subjt:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTE-GKV--NEMKNLEEKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE

Query:  EQDTYYLLSWKCRCGNKIYQP
        E+D+YYLLSWKCRCGNKIYQP
Subjt:  EQDTYYLLSWKCRCGNKIYQP

XP_008461115.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]3.2e-4075.21Show/hide
Query:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKV--NEMKNLE-EKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE
        MA+ ISLSTSLKLA      FFSFLPP SVGLVLSR G +EGK   +EMK LE +K VIGSRPPGCQNKCM+CRPCMAA VVPVHRMKGKAFQ F +  E
Subjt:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKV--NEMKNLE-EKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE

Query:  EQDTYYLLSWKCRCGNKIYQP
        E+D+YYLLSWKC+CGNKIYQP
Subjt:  EQDTYYLLSWKCRCGNKIYQP

XP_022953925.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita moschata]9.1e-2760.55Show/hide
Query:  LKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKVNEMKNLEEKRVIGSRPPGCQNKCMSCRPCM-AAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKC
        L +  A FFFFFS +PP+SVGLV                LE    IGSRPPGC NKCMSCRPCM AA VVPVH+MKGKAF    +  EE+ +YYLLSWKC
Subjt:  LKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKVNEMKNLEEKRVIGSRPPGCQNKCMSCRPCM-AAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKC

Query:  RCGNKIYQP
        +CGNKIYQP
Subjt:  RCGNKIYQP

XP_022991788.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita maxima]4.1e-2760.55Show/hide
Query:  LKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKVNEMKNLEEKRVIGSRPPGCQNKCMSCRPCM-AAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKC
        L +  A FFFFFS +PP+SVGLV                LE    IGSRPPGC +KCMSCRPCM AA VVPVH+MKGKAF    +  EE+D+YYLLSWKC
Subjt:  LKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKVNEMKNLEEKRVIGSRPPGCQNKCMSCRPCM-AAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKC

Query:  RCGNKIYQP
        +CGNKIYQP
Subjt:  RCGNKIYQP

TrEMBL top hitse value%identityAlignment
A0A0A0K6C2 Epidermal patterning factor-like protein2.2e-4277.69Show/hide
Query:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTE-GKV--NEMKNLEEKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE
        MA+ ISLSTSLKLA      FFSFLPP SVGLVLSR G +E GK   +EMKNLEEK VIGSRPPGCQNKCM+CRPCMAA VVPVHRMKGKAFQ F +  E
Subjt:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTE-GKV--NEMKNLEEKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE

Query:  EQDTYYLLSWKCRCGNKIYQP
        E+D+YYLLSWKCRCGNKIYQP
Subjt:  EQDTYYLLSWKCRCGNKIYQP

A0A1S3CDZ4 Epidermal patterning factor-like protein1.6e-4075.21Show/hide
Query:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKV--NEMKNLE-EKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE
        MA+ ISLSTSLKLA      FFSFLPP SVGLVLSR G +EGK   +EMK LE +K VIGSRPPGCQNKCM+CRPCMAA VVPVHRMKGKAFQ F +  E
Subjt:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKV--NEMKNLE-EKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE

Query:  EQDTYYLLSWKCRCGNKIYQP
        E+D+YYLLSWKC+CGNKIYQP
Subjt:  EQDTYYLLSWKCRCGNKIYQP

A0A5D3CGR2 Epidermal patterning factor-like protein4.5e-4074.38Show/hide
Query:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKV--NEMKNLE-EKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE
        MA+ ISLSTSLKLA      FFSFLPP SVGLVLSR G +EGK   +EMK LE +K VIGSRPPGC+NKCM+CRPCMAA VVPVHRMKGKAFQ F +  E
Subjt:  MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKV--NEMKNLE-EKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTE

Query:  EQDTYYLLSWKCRCGNKIYQP
        E+D+YYLLSWKC+CGNKIYQP
Subjt:  EQDTYYLLSWKCRCGNKIYQP

A0A6J1GR07 Epidermal patterning factor-like protein4.4e-2760.55Show/hide
Query:  LKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKVNEMKNLEEKRVIGSRPPGCQNKCMSCRPCM-AAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKC
        L +  A FFFFFS +PP+SVGLV                LE    IGSRPPGC NKCMSCRPCM AA VVPVH+MKGKAF    +  EE+ +YYLLSWKC
Subjt:  LKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKVNEMKNLEEKRVIGSRPPGCQNKCMSCRPCM-AAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKC

Query:  RCGNKIYQP
        +CGNKIYQP
Subjt:  RCGNKIYQP

A0A6J1JXA0 Epidermal patterning factor-like protein2.0e-2760.55Show/hide
Query:  LKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKVNEMKNLEEKRVIGSRPPGCQNKCMSCRPCM-AAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKC
        L +  A FFFFFS +PP+SVGLV                LE    IGSRPPGC +KCMSCRPCM AA VVPVH+MKGKAF    +  EE+D+YYLLSWKC
Subjt:  LKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKVNEMKNLEEKRVIGSRPPGCQNKCMSCRPCM-AAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKC

Query:  RCGNKIYQP
        +CGNKIYQP
Subjt:  RCGNKIYQP

SwissProt top hitse value%identityAlignment
P43212 Polygalacturonase1.2e-0542.19Show/hide
Query:  VIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP
        ++GSRPP C NKC  C PC A +V+ VHR+          P E    YY   W C    KIY P
Subjt:  VIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.9e-0643.08Show/hide
Query:  RVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP
        R +GS PP C +KC  C PC   V VPV         P  TP   +  YY  +W+C+CGNK+Y P
Subjt:  RVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 41.2e-0540.32Show/hide
Query:  GSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP
        GS PP C++KC  C+PC      PVH       QP  +   E   YY  +W+C+CGNK++ P
Subjt:  GSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 11.1e-0632.1Show/hide
Query:  LEEKRVIGSRPPGCQNKCMSCRPCMAAVV---------VPVHRMKGKAFQP---FFTPTEEQDTYYLLSWKCRCGNKIYQP
        +E+K  +GS PP C N+C +C PCMA  V           V+   G   +P     T  ++   Y  + WKC C    Y P
Subjt:  LEEKRVIGSRPPGCQNKCMSCRPCMAAVV---------VPVHRMKGKAFQP---FFTPTEEQDTYYLLSWKCRCGNKIYQP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 22.0e-0535.44Show/hide
Query:  VIGSRPPGCQN-KCMSCRPCMAAVVVPVHRMKGKAFQPF--------------FTPTEEQDTYYLLSWKCRCGNKIYQP
        +IGSRPP C+  +C SC  C  A+ VP +  + K   P               +T  ++   Y  +SWKC+CGN IY P
Subjt:  VIGSRPPGCQN-KCMSCRPCMAAVVVPVHRMKGKAFQPF--------------FTPTEEQDTYYLLSWKCRCGNKIYQP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related1.3e-0743.08Show/hide
Query:  RVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP
        R +GS PP C +KC  C PC   V VPV         P  TP   +  YY  +W+C+CGNK+Y P
Subjt:  RVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP

AT2G30370.2 allergen-related1.3e-0743.08Show/hide
Query:  RVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP
        R +GS PP C +KC  C PC   V VPV         P  TP   +  YY  +W+C+CGNK+Y P
Subjt:  RVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)8.5e-0740.32Show/hide
Query:  GSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP
        GS PP C++KC  C+PC      PVH       QP  +   E   YY  +W+C+CGNK++ P
Subjt:  GSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCRCGNKIYQP

AT4G37810.1 unknown protein1.5e-0635.44Show/hide
Query:  VIGSRPPGCQN-KCMSCRPCMAAVVVPVHRMKGKAFQPF--------------FTPTEEQDTYYLLSWKCRCGNKIYQP
        +IGSRPP C+  +C SC  C  A+ VP +  + K   P               +T  ++   Y  +SWKC+CGN IY P
Subjt:  VIGSRPPGCQN-KCMSCRPCMAAVVVPVHRMKGKAFQPF--------------FTPTEEQDTYYLLSWKCRCGNKIYQP

AT5G10310.1 unknown protein7.7e-0832.1Show/hide
Query:  LEEKRVIGSRPPGCQNKCMSCRPCMAAVV---------VPVHRMKGKAFQP---FFTPTEEQDTYYLLSWKCRCGNKIYQP
        +E+K  +GS PP C N+C +C PCMA  V           V+   G   +P     T  ++   Y  + WKC C    Y P
Subjt:  LEEKRVIGSRPPGCQNKCMSCRPCMAAVV---------VPVHRMKGKAFQP---FFTPTEEQDTYYLLSWKCRCGNKIYQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCTCAATTTCTCTTTCAACTTCCCTCAAATTGGCTGCTGCTTTCTTCTTCTTCTTCTTCTCATTTCTTCCTCCTAGATCAGTTGGGTTGGTTTTGTCAAGGAG
AGGTGTTACAGAGGGAAAAGTTAATGAAATGAAAAATTTGGAAGAAAAAAGGGTGATTGGTTCACGGCCGCCGGGATGTCAGAACAAATGTATGAGTTGCAGGCCGTGCA
TGGCGGCGGTGGTGGTTCCCGTGCACCGGATGAAGGGGAAGGCCTTTCAACCCTTTTTTACCCCTACAGAGGAACAGGATACCTATTATCTTCTCTCATGGAAATGCCGA
TGTGGGAATAAGATTTATCAACCTTAG
mRNA sequenceShow/hide mRNA sequence
TAGCAATTTCCCAACTAAATCAATGCCTCTCTCTTTTTTCCTCCGTTTCTTCATATTTCCTCTCCATCTCTCCCAGTTTCCTATTTATGTCTCTTCCACAGGAAACATCT
TTCAAACTTGTCCACTACCCTTCATTTAATACTTTTTTATATATATAAACCCCAACATTTATGATTTAGTCAATTGGATTGGATTGACTGTGAAAGTGAAAACTTCCCCT
TTTTTTACTTACAAATCTCACGAACCTGCTGCTTTTGTGATGGCTATCTCAATTTCTCTTTCAACTTCCCTCAAATTGGCTGCTGCTTTCTTCTTCTTCTTCTTCTCATT
TCTTCCTCCTAGATCAGTTGGGTTGGTTTTGTCAAGGAGAGGTGTTACAGAGGGAAAAGTTAATGAAATGAAAAATTTGGAAGAAAAAAGGGTGATTGGTTCACGGCCGC
CGGGATGTCAGAACAAATGTATGAGTTGCAGGCCGTGCATGGCGGCGGTGGTGGTTCCCGTGCACCGGATGAAGGGGAAGGCCTTTCAACCCTTTTTTACCCCTACAGAG
GAACAGGATACCTATTATCTTCTCTCATGGAAATGCCGATGTGGGAATAAGATTTATCAACCTTAGCTCCATTCTCATTTCCATCTTTGATCGAGAACATGTATCTATAT
TTAGGTGATTGCTATCAAAGTTGTTTGTTTTTTGCAATCAAATTGTTTATGTTGAACTTGAGAAACTAATGAAAGTGCATTTACA
Protein sequenceShow/hide protein sequence
MAISISLSTSLKLAAAFFFFFFSFLPPRSVGLVLSRRGVTEGKVNEMKNLEEKRVIGSRPPGCQNKCMSCRPCMAAVVVPVHRMKGKAFQPFFTPTEEQDTYYLLSWKCR
CGNKIYQP