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Lsi02G027170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G027170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF4050 domain-containing protein
Genome locationchr02:33497044..33508308
RNA-Seq ExpressionLsi02G027170
SyntenyLsi02G027170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461112.1 PREDICTED: uncharacterized protein LOC103499796 isoform X1 [Cucumis melo]5.9e-4870.21Show/hide
Query:  INSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRW
        I SGCLGCYTK +LKT LNEPSKGQQIQCHG++KP +SEDFWTTSTFDV+NSAGQSQGS                              LLLWNQTRQRW
Subjt:  INSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRW

Query:  TGNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
        TGNK+SE RAPQFQEPKLDWN TYESLLGSNKPFRQPIPLG
Subjt:  TGNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG

XP_008461113.1 PREDICTED: uncharacterized protein LOC103499796 isoform X2 [Cucumis melo]3.5e-4870.71Show/hide
Query:  NSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWT
        NSGCLGCYTK +LKT LNEPSKGQQIQCHG++KP +SEDFWTTSTFDV+NSAGQSQGS                              LLLWNQTRQRWT
Subjt:  NSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWT

Query:  GNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
        GNK+SE RAPQFQEPKLDWN TYESLLGSNKPFRQPIPLG
Subjt:  GNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG

XP_008461114.1 PREDICTED: uncharacterized protein LOC103499796 isoform X3 [Cucumis melo]5.0e-4770.29Show/hide
Query:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWTGN
        GCLGCYTK +LKT LNEPSKGQQIQCHG++KP +SEDFWTTSTFDV+NSAGQSQGS                              LLLWNQTRQRWTGN
Subjt:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWTGN

Query:  KRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
        K+SE RAPQFQEPKLDWN TYESLLGSNKPFRQPIPLG
Subjt:  KRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG

XP_031745028.1 uncharacterized protein LOC101208775 isoform X1 [Cucumis sativus]3.2e-4671.74Show/hide
Query:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWTGN
        GCLGCYTK KLKT LNEPSKGQQIQCHGL+KP +SEDFWTTSTFDVDNSAGQSQGS                              LLLWNQTRQRWTGN
Subjt:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWTGN

Query:  KRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
        KRSE   PQFQEPKLDWN TYESLLGSNKPFRQPIPLG
Subjt:  KRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG

XP_038899243.1 uncharacterized protein LOC120086589 [Benincasa hispida]4.1e-4973.91Show/hide
Query:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWTGN
        GCLGCYTK KLK+ELNEPSKGQQIQC GL+KP +SEDFWTTSTFDVDNSAGQSQGS                              LLLWNQTRQRWTGN
Subjt:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWTGN

Query:  KRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
        KRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
Subjt:  KRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG

TrEMBL top hitse value%identityAlignment
A0A0A0KBV0 Uncharacterized protein1.1e-4772.14Show/hide
Query:  NSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWT
        NSGCLGCYTK KLKT LNEPSKGQQIQCHGL+KP +SEDFWTTSTFDVDNSAGQSQGS                              LLLWNQTRQRWT
Subjt:  NSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWT

Query:  GNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
        GNKRSE   PQFQEPKLDWN TYESLLGSNKPFRQPIPLG
Subjt:  GNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG

A0A1S3CDH9 uncharacterized protein LOC103499796 isoform X32.4e-4770.29Show/hide
Query:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWTGN
        GCLGCYTK +LKT LNEPSKGQQIQCHG++KP +SEDFWTTSTFDV+NSAGQSQGS                              LLLWNQTRQRWTGN
Subjt:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWTGN

Query:  KRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
        K+SE RAPQFQEPKLDWN TYESLLGSNKPFRQPIPLG
Subjt:  KRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG

A0A1S3CEF0 uncharacterized protein LOC103499796 isoform X12.9e-4870.21Show/hide
Query:  INSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRW
        I SGCLGCYTK +LKT LNEPSKGQQIQCHG++KP +SEDFWTTSTFDV+NSAGQSQGS                              LLLWNQTRQRW
Subjt:  INSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRW

Query:  TGNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
        TGNK+SE RAPQFQEPKLDWN TYESLLGSNKPFRQPIPLG
Subjt:  TGNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG

A0A1S3CF66 uncharacterized protein LOC103499796 isoform X21.7e-4870.71Show/hide
Query:  NSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWT
        NSGCLGCYTK +LKT LNEPSKGQQIQCHG++KP +SEDFWTTSTFDV+NSAGQSQGS                              LLLWNQTRQRWT
Subjt:  NSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWT

Query:  GNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
        GNK+SE RAPQFQEPKLDWN TYESLLGSNKPFRQPIPLG
Subjt:  GNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG

A0A5D3CFJ1 Uncharacterized protein1.7e-4870.71Show/hide
Query:  NSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWT
        NSGCLGCYTK +LKT LNEPSKGQQIQCHG++KP +SEDFWTTSTFDV+NSAGQSQGS                              LLLWNQTRQRWT
Subjt:  NSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS------------------------------LLLWNQTRQRWT

Query:  GNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG
        GNK+SE RAPQFQEPKLDWN TYESLLGSNKPFRQPIPLG
Subjt:  GNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15350.1 unknown protein1.9e-2044.29Show/hide
Query:  GCLGCY-----TKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS---------------------------LLLWNQTRQRWT
        GC+GCY     T   LK   + PS      C   KKP +SEDFW+TST D+DN    SQGS                           LLLWNQTR+RW 
Subjt:  GCLGCY-----TKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS---------------------------LLLWNQTRQRWT

Query:  GNKRSENRAPQFQEPKLDWN-ATYESLLGSNKPFRQPIPL
        G  +  N     Q  KL+WN ATY+SLLGSNK F QPIPL
Subjt:  GNKRSENRAPQFQEPKLDWN-ATYESLLGSNKPFRQPIPL

AT1G15350.2 unknown protein1.9e-2044.29Show/hide
Query:  GCLGCY-----TKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS---------------------------LLLWNQTRQRWT
        GC+GCY     T   LK   + PS      C   KKP +SEDFW+TST D+DN    SQGS                           LLLWNQTR+RW 
Subjt:  GCLGCY-----TKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS---------------------------LLLWNQTRQRWT

Query:  GNKRSENRAPQFQEPKLDWN-ATYESLLGSNKPFRQPIPL
        G  +  N     Q  KL+WN ATY+SLLGSNK F QPIPL
Subjt:  GNKRSENRAPQFQEPKLDWN-ATYESLLGSNKPFRQPIPL

AT3G15770.1 unknown protein2.5e-2040.97Show/hide
Query:  INSGCLGCYTKLKLKTELNEPSKGQ-----QIQCHGLKKPRI--SEDFWTTSTFDVDNSAG-------------QSQG--------------SLLLWNQT
        + S CL C+ K K KT ++ P  G      +     L+KP +  SEDFWT +T D++++A               SQG               L+LWNQT
Subjt:  INSGCLGCYTKLKLKTELNEPSKGQ-----QIQCHGLKKPRI--SEDFWTTSTFDVDNSAG-------------QSQG--------------SLLLWNQT

Query:  RQRWTGNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPL
        RQ+W G+KRSE+R    +EP L+ N TYESLLGSNK F +PIPL
Subjt:  RQRWTGNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPL

AT5G25360.1 unknown protein4.4e-2546.62Show/hide
Query:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS--------------------------LLLWNQTRQRWTGNKRSE
        GC GC  K  L   ++EPSKG +IQ   +KKP +SEDFW+TST ++DNS  QSQ S                          L LWNQTRQ+W  N  S+
Subjt:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS--------------------------LLLWNQTRQRWTGNKRSE

Query:  NRAPQFQEPKLDWNATYESLLGSNKPFRQPIPL
         +A + +EP + WNATYESLLG NK F +PIPL
Subjt:  NRAPQFQEPKLDWNATYESLLGSNKPFRQPIPL

AT5G25360.2 unknown protein4.4e-2546.62Show/hide
Query:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS--------------------------LLLWNQTRQRWTGNKRSE
        GC GC  K  L   ++EPSKG +IQ   +KKP +SEDFW+TST ++DNS  QSQ S                          L LWNQTRQ+W  N  S+
Subjt:  GCLGCYTKLKLKTELNEPSKGQQIQCHGLKKPRISEDFWTTSTFDVDNSAGQSQGS--------------------------LLLWNQTRQRWTGNKRSE

Query:  NRAPQFQEPKLDWNATYESLLGSNKPFRQPIPL
         +A + +EP + WNATYESLLG NK F +PIPL
Subjt:  NRAPQFQEPKLDWNATYESLLGSNKPFRQPIPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCGTCCATGTTAAATTCTTCCAATTTGGTGTTTGCCACCGTCATGGTGGTGTCGAGCACGGCCGTCATTCTGGCTTTTCTCCGGCAGAACAAACCCGACATCCC
ACCGCCGCCGCAATTCTCCGACGGAACCAATTCTCGGCAACCCGAAATTCAGATTCTTCGCCCTTGTCTCTGTTCAGTCTCCTCCGAAATGTTTCCTTTGAAATGCAGCT
CTAGCATAAACAGTGGTTGTCTTGGATGCTACACAAAGCTGAAACTAAAAACTGAGCTGAATGAACCATCGAAAGGTCAACAAATTCAGTGTCATGGACTAAAGAAACCC
CGCATATCAGAGGATTTCTGGACTACTAGTACATTTGATGTGGACAACAGTGCAGGTCAATCACAAGGAAGTCTTCTTCTGTGGAATCAAACTAGGCAACGCTGGACAGG
GAATAAACGATCCGAAAACCGAGCACCACAGTTTCAAGAACCCAAGTTAGATTGGAATGCAACTTATGAAAGTTTACTAGGGAGCAACAAGCCATTTCGTCAACCTATTC
CACTCGGCGTAAGTTCTCGACCTGTCCAAACTCTTTCATGTGCTGGAAACCAAATCGAATCTAATCATGGATTGATGTTCGTTAAAACGTGCAGGAAATGGTAG
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTTCTCTCTCTTCTCTCTCTCCTAACCATAAAAGTGCTGTTTTTGCTGTCATCTTTCTTTCCCATTTTCGGCTCCAAAATTCTATTAAAAGTTTCAAAACTTTA
TCATTCGATGCCACTCTCAAACAAATTTGAACAAGAAAAATAAATAATTCACTCCATTTTCATCCCCCCCTTTTTCTCTCTTTACATTCATCTCATAAAAAGGTTTTCCA
AAAATCTCGATTTCCCACAAGAACAACAACAACAACAACAACAACAACAAAAACATTTTTTTTTTCTTTACCTTATGCCGACTGAAAAATCCTTGCTTTGATGATGTCGT
CCATGTTAAATTCTTCCAATTTGGTGTTTGCCACCGTCATGGTGGTGTCGAGCACGGCCGTCATTCTGGCTTTTCTCCGGCAGAACAAACCCGACATCCCACCGCCGCCG
CAATTCTCCGACGGAACCAATTCTCGGCAACCCGAAATTCAGATTCTTCGCCCTTGTCTCTGTTCAGTCTCCTCCGAAATGTTTCCTTTGAAATGCAGCTCTAGCATAAA
CAGTGGTTGTCTTGGATGCTACACAAAGCTGAAACTAAAAACTGAGCTGAATGAACCATCGAAAGGTCAACAAATTCAGTGTCATGGACTAAAGAAACCCCGCATATCAG
AGGATTTCTGGACTACTAGTACATTTGATGTGGACAACAGTGCAGGTCAATCACAAGGAAGTCTTCTTCTGTGGAATCAAACTAGGCAACGCTGGACAGGGAATAAACGA
TCCGAAAACCGAGCACCACAGTTTCAAGAACCCAAGTTAGATTGGAATGCAACTTATGAAAGTTTACTAGGGAGCAACAAGCCATTTCGTCAACCTATTCCACTCGGCGT
AAGTTCTCGACCTGTCCAAACTCTTTCATGTGCTGGAAACCAAATCGAATCTAATCATGGATTGATGTTCGTTAAAACGTGCAGGAAATGGTAG
Protein sequenceShow/hide protein sequence
MMSSMLNSSNLVFATVMVVSSTAVILAFLRQNKPDIPPPPQFSDGTNSRQPEIQILRPCLCSVSSEMFPLKCSSSINSGCLGCYTKLKLKTELNEPSKGQQIQCHGLKKP
RISEDFWTTSTFDVDNSAGQSQGSLLLWNQTRQRWTGNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLGVSSRPVQTLSCAGNQIESNHGLMFVKTCRKW