; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G027280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G027280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionZinc finger CCCH domain-containing protein 39-like
Genome locationchr02:33598343..33600796
RNA-Seq ExpressionLsi02G027280
SyntenyLsi02G027280
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135841.1 zinc finger CCCH domain-containing protein 39 isoform X1 [Cucumis sativus]2.3e-12980.28Show/hide
Query:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT
        MSAPNRFV EA G+WP LP PYPDPR QSFY+PTMS  VS+W M SNFGIPPW+N NIGY+HE GR YTPGFNDT R LPSG GIEF EGQLSER NV  
Subjt:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT

Query:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP
        SNEMKVC+ FQRR+KCAYGDQCRFLHEIP+++RD GSSSQNYEV T+A GHVMDR SGFDQLEEVRSKVQTK+VV GEIP+P+  K+RPCY WQTTGRCP
Subjt:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP

Query:  YGAGCRFVHGEAELQKLEPCSASQRGSVS--SASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED
        YGAGCRF HGEAELQKLEPC+ASQRGSV   S + TT+AA EAGLRSSR I TDCKNKGPR+NQFFESKESKKLIGIYADWLED
Subjt:  YGAGCRFVHGEAELQKLEPCSASQRGSVS--SASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED

XP_008461087.1 PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo]1.6e-12278.52Show/hide
Query:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT
        MSAPNRFV EA G+WP LP PYPDPR QSFY+ TMS  VS+W M SNFGIPPW+N NIGY+HELGR Y PGFNDTHR LPS  GIEFHEGQLSER NV  
Subjt:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT

Query:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP
        SNEMKVC+ FQRR+KCAYGDQCRFLHEIPE++RD GSSSQNYEV          RRSGFDQLEEVRSKVQTK+VV GEIP+P+  K RPCY WQTTGRCP
Subjt:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP

Query:  YGAGCRFVHGEAELQKLEPCSASQRGSVS--SASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED
        YGAGCRF HGEAELQKLEPCSASQRGSV   SA+ TT+A  EAGLRSS+ I TDCKNKGPR+NQFFESKESKKLIGIYADWLED
Subjt:  YGAGCRFVHGEAELQKLEPCSASQRGSVS--SASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED

XP_011659534.1 uncharacterized protein LOC101205166 isoform X2 [Cucumis sativus]5.2e-9777.98Show/hide
Query:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT
        MSAPNRFV EA G+WP LP PYPDPR QSFY+PTMS  VS+W M SNFGIPPW+N NIGY+HE GR YTPGFNDT R LPSG GIEF EGQLSER NV  
Subjt:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT

Query:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP
        SNEMKVC+ FQRR+KCAYGDQCRFLHEIP+++RD GSSSQNYEV T+A GHVMDR SGFDQLEEVRSKVQTK+VV GEIP+P+  K+RPCY WQTTGRCP
Subjt:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP

Query:  YGAGCRFVHGEAELQKLE
        YGAGCRF HGEAE +  E
Subjt:  YGAGCRFVHGEAELQKLE

XP_038897168.1 zinc finger CCCH domain-containing protein 39-like isoform X1 [Benincasa hispida]4.4e-13684.38Show/hide
Query:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHE--LGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNV
        MSAPNRFV EA GDW PLP PYPD RLQSF+QPTMSETVS+WGM SN  IPPW+NRN+GYDHE  LGRLYTPGFNDTHRRLPS  GIEFHEGQLSERS V
Subjt:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHE--LGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNV

Query:  T----TSNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQ
             TSNEMKVC+QFQRRRKCAYGDQCRFLHEIPE++R+FGSSSQNYEVR +ASGHV+DRRSGFDQLEEVRSKVQTKIVV GEIP+P+ CKTRPCY WQ
Subjt:  T----TSNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQ

Query:  TTGRCPYGAGCRFVHGEAELQKLEPCSASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED
        TTGRCPYGAGCRF HGEAELQK EPCSA+QRGSV  AS TTS   EAGLRSS GI TDCKNKGPRMNQFFESKESKKLIGIYADWLED
Subjt:  TTGRCPYGAGCRFVHGEAELQKLEPCSASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED

XP_038897171.1 zinc finger CCCH domain-containing protein 12-like isoform X2 [Benincasa hispida]7.1e-10283.94Show/hide
Query:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHE--LGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNV
        MSAPNRFV EA GDW PLP PYPD RLQSF+QPTMSETVS+WGM SN  IPPW+NRN+GYDHE  LGRLYTPGFNDTHRRLPS  GIEFHEGQLSERS V
Subjt:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHE--LGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNV

Query:  T----TSNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQ
             TSNEMKVC+QFQRRRKCAYGDQCRFLHEIPE++R+FGSSSQNYEVR +ASGHV+DRRSGFDQLEEVRSKVQTKIVV GEIP+P+ CKTRPCY WQ
Subjt:  T----TSNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQ

Query:  TTGRCPYGAGCRFVHGEA
        TTGRCPYGAGCRF HGEA
Subjt:  TTGRCPYGAGCRFVHGEA

TrEMBL top hitse value%identityAlignment
A0A0A0KBW4 Uncharacterized protein1.1e-12980.28Show/hide
Query:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT
        MSAPNRFV EA G+WP LP PYPDPR QSFY+PTMS  VS+W M SNFGIPPW+N NIGY+HE GR YTPGFNDT R LPSG GIEF EGQLSER NV  
Subjt:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT

Query:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP
        SNEMKVC+ FQRR+KCAYGDQCRFLHEIP+++RD GSSSQNYEV T+A GHVMDR SGFDQLEEVRSKVQTK+VV GEIP+P+  K+RPCY WQTTGRCP
Subjt:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP

Query:  YGAGCRFVHGEAELQKLEPCSASQRGSVS--SASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED
        YGAGCRF HGEAELQKLEPC+ASQRGSV   S + TT+AA EAGLRSSR I TDCKNKGPR+NQFFESKESKKLIGIYADWLED
Subjt:  YGAGCRFVHGEAELQKLEPCSASQRGSVS--SASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED

A0A1S4E329 zinc finger CCCH domain-containing protein 39-like7.8e-12378.52Show/hide
Query:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT
        MSAPNRFV EA G+WP LP PYPDPR QSFY+ TMS  VS+W M SNFGIPPW+N NIGY+HELGR Y PGFNDTHR LPS  GIEFHEGQLSER NV  
Subjt:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT

Query:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP
        SNEMKVC+ FQRR+KCAYGDQCRFLHEIPE++RD GSSSQNYEV          RRSGFDQLEEVRSKVQTK+VV GEIP+P+  K RPCY WQTTGRCP
Subjt:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP

Query:  YGAGCRFVHGEAELQKLEPCSASQRGSVS--SASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED
        YGAGCRF HGEAELQKLEPCSASQRGSV   SA+ TT+A  EAGLRSS+ I TDCKNKGPR+NQFFESKESKKLIGIYADWLED
Subjt:  YGAGCRFVHGEAELQKLEPCSASQRGSVS--SASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED

A0A5A7UUP3 Zinc finger CCCH domain-containing protein 39-like7.8e-12378.52Show/hide
Query:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT
        MSAPNRFV EA G+WP LP PYPDPR QSFY+ TMS  VS+W M SNFGIPPW+N NIGY+HELGR Y PGFNDTHR LPS  GIEFHEGQLSER NV  
Subjt:  MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTT

Query:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP
        SNEMKVC+ FQRR+KCAYGDQCRFLHEIPE++RD GSSSQNYEV          RRSGFDQLEEVRSKVQTK+VV GEIP+P+  K RPCY WQTTGRCP
Subjt:  SNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP

Query:  YGAGCRFVHGEAELQKLEPCSASQRGSVS--SASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED
        YGAGCRF HGEAELQKLEPCSASQRGSV   SA+ TT+A  EAGLRSS+ I TDCKNKGPR+NQFFESKESKKLIGIYADWLED
Subjt:  YGAGCRFVHGEAELQKLEPCSASQRGSVS--SASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED

A0A6J1HGS0 zinc finger CCCH domain-containing protein 39-like2.1e-9165.96Show/hide
Query:  EAPGDW-----PPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIG-YDHELGRLYTPGFND-THRRLPSGLGIEFHEGQLSE----RSNV
        EA G W     PPLP  Y   R  SFYQPTMSE V +  M SNF IP W+N +IG +D+EL   Y    ND T   LPS  GIEFHE +L E     S  
Subjt:  EAPGDW-----PPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIG-YDHELGRLYTPGFND-THRRLPSGLGIEFHEGQLSE----RSNV

Query:  TTSNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGR
          S EMKVC+QFQRR KCAYGDQCRFLH+IPE ++DFGSSSQN+EVR +ASGHVMD +S FDQ EEVRSKVQTKIV   EIP PV+CKTR CY WQTTG 
Subjt:  TTSNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGR

Query:  CPYGAGCRFVHGEAELQKLEPCSASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKG-PRMNQFFESKESKKLIGIYADWLED
        C YG  CRF HGEAELQKLE CS S+RG V  AS TT AAA AGLR SRGI TDCKNKG  RM Q F+SKE KKLIGIYADWLE+
Subjt:  CPYGAGCRFVHGEAELQKLEPCSASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKG-PRMNQFFESKESKKLIGIYADWLED

A0A6J1KMG0 zinc finger CCCH domain-containing protein 39-like1.5e-8966.08Show/hide
Query:  EAPGDWPPL-PAPYPD----PRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIG-YDHELGRLYTPGFND-THRRLPSGLGIEFHEGQLSE----RSNV
        EA G WPPL P P+P      R  SFYQPTMSE V +  M SNF IP W+N NIG +D+EL   Y    ND T   LPS  GIEFHE +L E     S  
Subjt:  EAPGDWPPL-PAPYPD----PRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIG-YDHELGRLYTPGFND-THRRLPSGLGIEFHEGQLSE----RSNV

Query:  TTSNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGR
          + EMKVC+QFQRR KCAYGDQCRFLH+IPE ++DFG SSQN+EVR +ASGHVMDR+S FDQ EEVRSKVQTKIV   EIP PVSCKTR CY WQTTG 
Subjt:  TTSNEMKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGR

Query:  CPYGAGCRFVHGEAELQKLEPCSASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKG-PRMNQFFESKE-SKKLIGIYADWLED
        C YG  CRF HGEAELQKLE CS S+RG V  AS TT AAA AGLR SRGI TD KNKG  RM Q F+SKE  KKLIGIYADWLE+
Subjt:  CPYGAGCRFVHGEAELQKLEPCSASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKG-PRMNQFFESKE-SKKLIGIYADWLED

SwissProt top hitse value%identityAlignment
Q5PP65 Zinc finger CCCH domain-containing protein 284.4e-0630.77Show/hide
Query:  KTRPCYSWQTTGRCPYGAGCRFVHGEAELQKL--------------EPCSASQRGSVSSASPTTSAAAEAGLRSS------RGIATDCKNKGPRMNQFFE
        KTR C  WQTTG CP+G+ C F HG +EL                       QRG V + +   S    +   SS       G+ T  K KGP       
Subjt:  KTRPCYSWQTTGRCPYGAGCRFVHGEAELQKL--------------EPCSASQRGSVSSASPTTSAAAEAGLRSS------RGIATDCKNKGPRMNQFFE

Query:  SKESKKLIGIYADWLED
             K+  +Y DW++D
Subjt:  SKESKKLIGIYADWLED

Q84UQ3 Zinc finger CCCH domain-containing protein 562.3e-1026.13Show/hide
Query:  CKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCPYGAGCR
        CK+F     C YGD C FLH+   ++R+  + S +  V     G       G        +   +    +G + +P + KTR C  W+ TG CP+G+ C 
Subjt:  CKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCPYGAGCR

Query:  FVHGEAELQK------------LEPCSASQRGSVSSASPTTSAAAEA-----------GLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED
        F HG AEL K                  S++  VS+ +P  +AAA             G+++ R      +  G       + K   K+  IY DW+++
Subjt:  FVHGEAELQK------------LEPCSASQRGSVSSASPTTSAAAEA-----------GLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED

Q9LQM3 Zinc finger CCCH domain-containing protein 127.3e-0930.58Show/hide
Query:  CKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHG-----------EIPRPVSCKTRPCYSWQT
        CK+F     C YG+ C FLH+   R+R      ++  +     G+      G            + +VV G           +I +P + KTR C  W+ 
Subjt:  CKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHG-----------EIPRPVSCKTRPCYSWQT

Query:  TGRCPYGAGCRFVHGEAELQK
        TG CP+GA C F HG AEL +
Subjt:  TGRCPYGAGCRFVHGEAELQK

Q9LT81 Zinc finger CCCH domain-containing protein 392.9e-1327.13Show/hide
Query:  MKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTI---ASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP
        MK+C++F    +C YGD+C F+HE   + R+     +   V ++   A+    D  S   ++    S      + +G + + V  KTR C  +  TG+CP
Subjt:  MKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTI---ASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP

Query:  YGAGCRFVHGEAELQKL------EPCSASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED
        +G  C F HG+AEL         E  +A    +  +  P   A A   +      ++    +G R     +  +SKK+  IY DW++D
Subjt:  YGAGCRFVHGEAELQKL------EPCSASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED

Arabidopsis top hitse value%identityAlignment
AT1G32360.1 Zinc finger (CCCH-type) family protein5.2e-1030.58Show/hide
Query:  CKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHG-----------EIPRPVSCKTRPCYSWQT
        CK+F     C YG+ C FLH+   R+R      ++  +     G+      G            + +VV G           +I +P + KTR C  W+ 
Subjt:  CKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHG-----------EIPRPVSCKTRPCYSWQT

Query:  TGRCPYGAGCRFVHGEAELQK
        TG CP+GA C F HG AEL +
Subjt:  TGRCPYGAGCRFVHGEAELQK

AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein3.1e-0730.77Show/hide
Query:  KTRPCYSWQTTGRCPYGAGCRFVHGEAELQKL--------------EPCSASQRGSVSSASPTTSAAAEAGLRSS------RGIATDCKNKGPRMNQFFE
        KTR C  WQTTG CP+G+ C F HG +EL                       QRG V + +   S    +   SS       G+ T  K KGP       
Subjt:  KTRPCYSWQTTGRCPYGAGCRFVHGEAELQKL--------------EPCSASQRGSVSSASPTTSAAAEAGLRSS------RGIATDCKNKGPRMNQFFE

Query:  SKESKKLIGIYADWLED
             K+  +Y DW++D
Subjt:  SKESKKLIGIYADWLED

AT3G19360.1 Zinc finger (CCCH-type) family protein2.0e-1427.13Show/hide
Query:  MKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTI---ASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP
        MK+C++F    +C YGD+C F+HE   + R+     +   V ++   A+    D  S   ++    S      + +G + + V  KTR C  +  TG+CP
Subjt:  MKVCKQFQRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTI---ASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCP

Query:  YGAGCRFVHGEAELQKL------EPCSASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED
        +G  C F HG+AEL         E  +A    +  +  P   A A   +      ++    +G R     +  +SKK+  IY DW++D
Subjt:  YGAGCRFVHGEAELQKL------EPCSASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCTCCTAATCGGTTTGTCCTTGAGGCTCCTGGCGATTGGCCGCCATTGCCTGCTCCATATCCTGATCCTAGACTCCAATCATTCTATCAGCCTACGATGTCCGA
AACTGTTTCTACTTGGGGAATGCGTTCAAATTTTGGGATTCCACCATGGAGCAATCGGAACATTGGGTATGACCATGAGTTGGGGCGTTTGTATACACCTGGTTTTAATG
ATACTCACAGAAGGTTACCTTCCGGACTAGGAATTGAATTCCATGAAGGTCAATTGTCAGAGCGTTCGAATGTTACTACCTCGAATGAAATGAAAGTCTGCAAACAGTTC
CAACGACGGAGGAAATGTGCATATGGGGATCAGTGTCGTTTCCTTCATGAAATTCCTGAGAGAAGTAGGGATTTTGGCTCCTCCAGCCAAAATTATGAGGTTAGAACAAT
AGCTTCTGGTCATGTTATGGATCGAAGAAGCGGGTTTGATCAATTGGAAGAAGTCAGATCAAAAGTACAAACGAAGATCGTTGTCCACGGTGAGATTCCAAGGCCTGTAA
GTTGCAAAACAAGGCCCTGTTACTCCTGGCAGACGACTGGTCGCTGCCCATATGGGGCGGGTTGTCGCTTTGTCCATGGAGAAGCAGAACTACAGAAGCTTGAGCCATGC
AGTGCATCACAACGTGGGAGCGTAAGTAGTGCCTCTCCAACAACATCTGCTGCTGCCGAAGCTGGATTAAGAAGCAGCAGAGGAATCGCAACCGACTGTAAGAATAAAGG
GCCAAGAATGAACCAATTCTTTGAATCAAAGGAGTCTAAGAAGTTGATTGGCATTTATGCCGACTGGCTTGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
AAATTTCTTATATTAAATTGTAATTTAAACTTCTTTATTTCTTGTAATTAGATAAATAAAAAAAATTTGAGAAAAAATTGATATATACATATATATGGATTTTGTTCAAA
CATTTTTAGTAACAAAATAATTATCATAATTATTGTTTAATTTGGTGTATCTGAAAATTGATATTTAGAAGATGAAAATGAAAAAAATAAATCCAAACAGTTCAAAAATT
AGACCGCGAAACAAGTCAAGGGGGGGAAACGAAAGGACCCCCCAAACCGAAGCAGCCACCGCGATATCGGAACTCCACCGTCAAATCTCGCGGCGGAGTTTGTTTCATCT
TCTCCGCTGAGTTTTCCAATGGACGGCTAGGGTTTCGCTCTCGTTTGCTCTTCTGGAAGTTTTTCCGACGCTCTGGTTGATTACTGGACAAGCTTTCATCAGGTATCTAC
TGGAGTTTTTTATTCTTTTGCGCCAAATTTAGTCTCCTCGACTACTTAACTGCATGTAACAATTCTTGCTTGATTCTCTTGCGATCTGAAGATTTCGACAATATACAGAG
ATTTAAGCGATTCTTGCAATTGTAACTTTTTGGAAAAGAAATGTTGTTTAGAATCCTTCTGTTTTTCCGTTCAAAGAATTTGAATCTTGAAATTGGATGGTTTGGCCCTT
GAAATGAGTGCTCCTAATCGGTTTGTCCTTGAGGCTCCTGGCGATTGGCCGCCATTGCCTGCTCCATATCCTGATCCTAGACTCCAATCATTCTATCAGCCTACGATGTC
CGAAACTGTTTCTACTTGGGGAATGCGTTCAAATTTTGGGATTCCACCATGGAGCAATCGGAACATTGGGTATGACCATGAGTTGGGGCGTTTGTATACACCTGGTTTTA
ATGATACTCACAGAAGGTTACCTTCCGGACTAGGAATTGAATTCCATGAAGGTCAATTGTCAGAGCGTTCGAATGTTACTACCTCGAATGAAATGAAAGTCTGCAAACAG
TTCCAACGACGGAGGAAATGTGCATATGGGGATCAGTGTCGTTTCCTTCATGAAATTCCTGAGAGAAGTAGGGATTTTGGCTCCTCCAGCCAAAATTATGAGGTTAGAAC
AATAGCTTCTGGTCATGTTATGGATCGAAGAAGCGGGTTTGATCAATTGGAAGAAGTCAGATCAAAAGTACAAACGAAGATCGTTGTCCACGGTGAGATTCCAAGGCCTG
TAAGTTGCAAAACAAGGCCCTGTTACTCCTGGCAGACGACTGGTCGCTGCCCATATGGGGCGGGTTGTCGCTTTGTCCATGGAGAAGCAGAACTACAGAAGCTTGAGCCA
TGCAGTGCATCACAACGTGGGAGCGTAAGTAGTGCCTCTCCAACAACATCTGCTGCTGCCGAAGCTGGATTAAGAAGCAGCAGAGGAATCGCAACCGACTGTAAGAATAA
AGGGCCAAGAATGAACCAATTCTTTGAATCAAAGGAGTCTAAGAAGTTGATTGGCATTTATGCCGACTGGCTTGAAGATTGAGTTTTCCGCATGACTTGCAGAACAAAGA
TTTGACCAAATGCCGAGGCTTTTTCCAATTCTCACAAAGTGGCTGAGAATATGAAGGTTCTTCCTGAACTTCGTAACTTCATATTGACATTGAATATAGTGTATGGATAA
TAGAAATGATTCTTAACAAGAATATGAAAATTTTCTGTCTTTGTGCACGACTTCTGAATATAGTAGCAAAGGCAAGAATCAAGATGATTAGTCTGTTCATTGTATTCCAT
CTTTCGACTCGTTTGGTTTTACTTTTTGACAGAGATAAACGTAGGAGTATGAAGATTTGAATTCTAAATGAAAACTCTCTCACACCCAACCATTG
Protein sequenceShow/hide protein sequence
MSAPNRFVLEAPGDWPPLPAPYPDPRLQSFYQPTMSETVSTWGMRSNFGIPPWSNRNIGYDHELGRLYTPGFNDTHRRLPSGLGIEFHEGQLSERSNVTTSNEMKVCKQF
QRRRKCAYGDQCRFLHEIPERSRDFGSSSQNYEVRTIASGHVMDRRSGFDQLEEVRSKVQTKIVVHGEIPRPVSCKTRPCYSWQTTGRCPYGAGCRFVHGEAELQKLEPC
SASQRGSVSSASPTTSAAAEAGLRSSRGIATDCKNKGPRMNQFFESKESKKLIGIYADWLED